RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 TMEM87AQ8NBN3 555 aa14.92□□□□□ -0.02
VPS52-218ENST00000482399 NBPF4Q96M43 638 aa14.92□□□□□ -0.02
VPS52-218ENST00000482399 ZNF215Q9UL58 517 aaPredicted RBP14.92□□□□□ -0.02
VPS52-218ENST00000482399 TCHHQ07283 1943 aa14.92□□□□□ -0.02
VPS52-218ENST00000482399 RPS6KB1P23443 525 aa14.91□□□□□ -0.02
VPS52-218ENST00000482399 ELF2Q15723 593 aa14.91□□□□□ -0.02
VPS52-218ENST00000482399 CCDC144BQ3MJ40 725 aa14.91□□□□□ -0.02
VPS52-218ENST00000482399 PLEKHO1Q53GL0 409 aaPredicted RBP14.91□□□□□ -0.02
VPS52-218ENST00000482399 CCDC144CPQ8IYA2 1237 aa14.91□□□□□ -0.02
VPS52-218ENST00000482399 CEP57L1Q8IYX8 460 aa14.91□□□□□ -0.02
VPS52-218ENST00000482399 ABCA9Q8IUA7 1624 aa14.91□□□□□ -0.02
VPS52-218ENST00000482399 A0A1B0GVL5 298 aa14.91□□□□□ -0.02
VPS52-218ENST00000482399 GOLIM4O00461 696 aa14.91□□□□□ -0.02
VPS52-218ENST00000482399 ATP2B1P20020 1258 aa14.91□□□□□ -0.02
VPS52-218ENST00000482399 TMC6Q7Z403 805 aa14.91□□□□□ -0.02
VPS52-218ENST00000482399 PDILTQ8N807 584 aa14.91□□□□□ -0.02
VPS52-218ENST00000482399 SNRKQ9NRH2 765 aa14.91□□□□□ -0.02
VPS52-218ENST00000482399 NLRP2Q9NX02 1062 aa14.91□□□□□ -0.02
VPS52-218ENST00000482399 USP32Q8NFA0 1604 aa14.91□□□□□ -0.02
VPS52-218ENST00000482399 USP27XA6NNY8 438 aa14.91□□□□□ -0.02
VPS52-218ENST00000482399 FKBP4Q02790 459 aaKnown RBP eCLIP14.91□□□□□ -0.02
VPS52-218ENST00000482399 NCBP1Q09161 790 aaKnown RBP14.91□□□□□ -0.02
VPS52-218ENST00000482399 C11orf57Q6ZUT1 292 aaPredicted RBP14.91□□□□□ -0.02
VPS52-218ENST00000482399 CHMP4AQ9BY43 222 aa14.91□□□□□ -0.02
VPS52-218ENST00000482399 CLSTN2Q9H4D0 955 aa14.91□□□□□ -0.02
VPS52-218ENST00000482399 SPTLC3Q9NUV7 552 aa14.91□□□□□ -0.02
VPS52-218ENST00000482399 SMTNL1A8MU46 457 aa14.9□□□□□ -0.02
VPS52-218ENST00000482399 POLR3GO15318 223 aaPredicted RBP14.9□□□□□ -0.02
VPS52-218ENST00000482399 ZC3H6P61129 1189 aaKnown RBP14.9□□□□□ -0.02
VPS52-218ENST00000482399 HSP90AB3PQ58FF7 597 aa14.9□□□□□ -0.02
VPS52-218ENST00000482399 HECW2Q9P2P5 1572 aa14.9□□□□□ -0.02
VPS52-218ENST00000482399 AOX1Q06278 1338 aa14.9□□□□□ -0.02
VPS52-218ENST00000482399 PIK3C2BO00750 1634 aa14.9□□□□□ -0.02
VPS52-218ENST00000482399 KIF18AQ8NI77 898 aa14.9□□□□□ -0.02
VPS52-218ENST00000482399 NECTIN1Q15223 517 aa14.89□□□□□ -0.03
VPS52-218ENST00000482399 SYNE3Q6ZMZ3 975 aa14.89□□□□□ -0.03
VPS52-218ENST00000482399 TPM4P67936 248 aa14.89□□□□□ -0.03
VPS52-218ENST00000482399 KSR2Q6VAB6 950 aa14.89□□□□□ -0.03
VPS52-218ENST00000482399 MNS1Q8NEH6 495 aa14.89□□□□□ -0.03
VPS52-218ENST00000482399 PGBD1Q96JS3 809 aa14.89□□□□□ -0.03
VPS52-218ENST00000482399 FRMPD1Q5SYB0 1578 aa14.89□□□□□ -0.03
VPS52-218ENST00000482399 SETD1BQ9UPS6 1966 aaKnown RBP14.89□□□□□ -0.03
VPS52-218ENST00000482399 APPP05067 770 aa14.89□□□□□ -0.03
VPS52-218ENST00000482399 LMOD1P29536 600 aaPredicted RBP14.89□□□□□ -0.03
VPS52-218ENST00000482399 POLA2Q14181 598 aa14.89□□□□□ -0.03
VPS52-218ENST00000482399 GTF3C6Q969F1 213 aa14.89□□□□□ -0.03
VPS52-218ENST00000482399 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.89□□□□□ -0.03
VPS52-218ENST00000482399 KNDC1Q76NI1 1749 aa14.89□□□□□ -0.03
VPS52-218ENST00000482399 SBNO1A3KN83 1393 aa14.88□□□□□ -0.03
VPS52-218ENST00000482399 PLEKHG3A1L390 1219 aa14.88□□□□□ -0.03
VPS52-218ENST00000482399 ST3GAL1Q11201 340 aa14.88□□□□□ -0.03
VPS52-218ENST00000482399 STX1AQ16623 288 aa14.88□□□□□ -0.03
VPS52-218ENST00000482399 COPS6Q7L5N1 327 aa14.88□□□□□ -0.03
VPS52-218ENST00000482399 GTPBP4Q9BZE4 634 aaKnown RBP14.88□□□□□ -0.03
VPS52-218ENST00000482399 NAT10Q9H0A0 1025 aaKnown RBP14.88□□□□□ -0.03
VPS52-218ENST00000482399 TOMM22Q9NS69 142 aa14.88□□□□□ -0.03
VPS52-218ENST00000482399 SASH1O94885 1247 aa14.87□□□□□ -0.03
VPS52-218ENST00000482399 TFCP2Q12800 502 aa14.87□□□□□ -0.03
VPS52-218ENST00000482399 SYT10Q6XYQ8 523 aa14.87□□□□□ -0.03
VPS52-218ENST00000482399 XAGE3Q8WTP9 111 aa14.87□□□□□ -0.03
VPS52-218ENST00000482399 MAP4K1Q92918 833 aa14.87□□□□□ -0.03
VPS52-218ENST00000482399 IGSF1Q8N6C5 1336 aa14.87□□□□□ -0.03
VPS52-218ENST00000482399 PTPDC1A2A3K4 754 aa14.87□□□□□ -0.03
VPS52-218ENST00000482399 SERPINC1P01008 464 aa14.87□□□□□ -0.03
VPS52-218ENST00000482399 SFPQP23246 707 aaKnown RBP eCLIP14.87□□□□□ -0.03
VPS52-218ENST00000482399 TTC5Q8N0Z6 440 aa14.87□□□□□ -0.03
VPS52-218ENST00000482399 DBNDD2Q9BQY9 259 aa14.87□□□□□ -0.03
VPS52-218ENST00000482399 FUCA2Q9BTY2 467 aa14.87□□□□□ -0.03
VPS52-218ENST00000482399 ANO10Q9NW15 660 aa14.87□□□□□ -0.03
VPS52-218ENST00000482399 PAXBP1Q9Y5B6 917 aa14.87□□□□□ -0.03
VPS52-218ENST00000482399 USP28Q96RU2 1077 aa14.87□□□□□ -0.03
VPS52-218ENST00000482399 URI1O94763 535 aaPredicted RBP14.86□□□□□ -0.03
VPS52-218ENST00000482399 MARCKSP29966 332 aaPredicted RBP14.86□□□□□ -0.03
VPS52-218ENST00000482399 SNW1Q13573 536 aaKnown RBP14.86□□□□□ -0.03
VPS52-218ENST00000482399 KRT32Q14532 448 aa14.86□□□□□ -0.03
VPS52-218ENST00000482399 TTLL5Q6EMB2 1281 aa14.86□□□□□ -0.03
VPS52-218ENST00000482399 ZNF396Q96N95 335 aaPredicted RBP14.86□□□□□ -0.03
VPS52-218ENST00000482399 IFNKQ9P0W0 207 aa14.86□□□□□ -0.03
VPS52-218ENST00000482399 IFT172Q9UG01 1749 aa14.86□□□□□ -0.03
VPS52-218ENST00000482399 ARHGEF10O15013 1369 aa14.86□□□□□ -0.03
VPS52-218ENST00000482399 TAF7LQ5H9L4 462 aa14.86□□□□□ -0.03
VPS52-218ENST00000482399 ZFP91Q96JP5 570 aaPredicted RBP14.86□□□□□ -0.03
VPS52-218ENST00000482399 TM6SF1Q9BZW5 370 aa14.86□□□□□ -0.03
VPS52-218ENST00000482399 A0A087WZG4 1122 aa14.86□□□□□ -0.03
VPS52-218ENST00000482399 TIMM10P62072 90 aa14.86□□□□□ -0.03
VPS52-218ENST00000482399 ZSWIM4Q9H7M6 989 aa14.86□□□□□ -0.03
VPS52-218ENST00000482399 OGFRQ9NZT2 677 aa14.86□□□□□ -0.03
VPS52-218ENST00000482399 TOB2Q14106 344 aaPredicted RBP14.85□□□□□ -0.03
VPS52-218ENST00000482399 CFAP100Q494V2 611 aa14.85□□□□□ -0.03
VPS52-218ENST00000482399 LRRC8AQ8IWT6 810 aa14.85□□□□□ -0.03
VPS52-218ENST00000482399 LINS1Q8NG48 757 aa14.85□□□□□ -0.03
VPS52-218ENST00000482399 DNAI1Q9UI46 699 aa14.85□□□□□ -0.03
VPS52-218ENST00000482399 NEURL4Q96JN8 1562 aa14.85□□□□□ -0.03
VPS52-218ENST00000482399 TTC21AQ8NDW8 1320 aa14.84□□□□□ -0.03
VPS52-218ENST00000482399 ZBTB22O15209 634 aa14.84□□□□□ -0.03
VPS52-218ENST00000482399 ERCC6LQ2NKX8 1250 aa14.84□□□□□ -0.03
VPS52-218ENST00000482399 KRT222Q8N1A0 295 aa14.84□□□□□ -0.03
VPS52-218ENST00000482399 RAPGEF4Q8WZA2 1011 aa14.84□□□□□ -0.03
VPS52-218ENST00000482399 ST7Q9NRC1 585 aa14.84□□□□□ -0.03
VPS52-218ENST00000482399 USP6P35125 1406 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms