RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 RPGRQ92834 1020 aaKnown RBP16.61■□□□□ 0.25
HDAC1-208ENST00000482310 ZNF622Q969S3 477 aaKnown RBP eCLIP16.61■□□□□ 0.254e-7■□□□□ 9.1
HDAC1-208ENST00000482310 BRIP1Q9BX63 1249 aa16.61■□□□□ 0.25
HDAC1-208ENST00000482310 BICC1Q9H694 974 aaKnown RBP16.61■□□□□ 0.25
HDAC1-208ENST00000482310 DDX19BQ9UMR2 479 aa16.61■□□□□ 0.25
HDAC1-208ENST00000482310 GNAI3P08754 354 aa16.6■□□□□ 0.25
HDAC1-208ENST00000482310 DPEP1P16444 411 aa16.6■□□□□ 0.25
HDAC1-208ENST00000482310 UTYO14607 1347 aa16.6■□□□□ 0.25
HDAC1-208ENST00000482310 RIC1Q4ADV7 1423 aa16.6■□□□□ 0.25
HDAC1-208ENST00000482310 A0A1B0GUL6 1792 aa16.59■□□□□ 0.25
HDAC1-208ENST00000482310 H0YIN7 160 aa16.59■□□□□ 0.25
HDAC1-208ENST00000482310 ZBTB7BO15156 539 aaPredicted RBP16.59■□□□□ 0.25
HDAC1-208ENST00000482310 FAM161AQ3B820 660 aa16.59■□□□□ 0.25
HDAC1-208ENST00000482310 SLC10A5Q5PT55 438 aa16.59■□□□□ 0.25
HDAC1-208ENST00000482310 EXOC6Q8TAG9 804 aa16.59■□□□□ 0.25
HDAC1-208ENST00000482310 GNAI2P04899 355 aa16.58■□□□□ 0.24
HDAC1-208ENST00000482310 FOXO4P98177 505 aa16.58■□□□□ 0.24
HDAC1-208ENST00000482310 LMBR1LQ6UX01 489 aa16.58■□□□□ 0.24
HDAC1-208ENST00000482310 KAZALD1Q96I82 304 aa16.58■□□□□ 0.24
HDAC1-208ENST00000482310 GREM2Q9H772 168 aa16.58■□□□□ 0.24
HDAC1-208ENST00000482310 CD2APQ9Y5K6 639 aa16.58■□□□□ 0.24
HDAC1-208ENST00000482310 ARFGEF1Q9Y6D6 1849 aa16.58■□□□□ 0.24
HDAC1-208ENST00000482310 HSP90B1P14625 803 aaKnown RBP16.57■□□□□ 0.24
HDAC1-208ENST00000482310 CCDC152Q4G0S7 254 aa16.57■□□□□ 0.24
HDAC1-208ENST00000482310 ANKRD44Q8N8A2 993 aa16.57■□□□□ 0.24
HDAC1-208ENST00000482310 TTLL11Q8NHH1 800 aa16.57■□□□□ 0.24
HDAC1-208ENST00000482310 SEC31BQ9NQW1 1179 aa16.57■□□□□ 0.24
HDAC1-208ENST00000482310 ZNF219Q9P2Y4 722 aaPredicted RBP16.57■□□□□ 0.24
HDAC1-208ENST00000482310 SRGNP10124 158 aa16.56■□□□□ 0.24
HDAC1-208ENST00000482310 C1QTNF8P60827 252 aa16.56■□□□□ 0.24
HDAC1-208ENST00000482310 PELP1Q8IZL8 1130 aaKnown RBP16.56■□□□□ 0.24
HDAC1-208ENST00000482310 PLA2G12BQ9BX93 195 aa16.56■□□□□ 0.24
HDAC1-208ENST00000482310 CCDC88AQ3V6T2 1871 aa16.56■□□□□ 0.24
HDAC1-208ENST00000482310 NEFLP07196 543 aa16.55■□□□□ 0.24
HDAC1-208ENST00000482310 NPR1P16066 1061 aa16.55■□□□□ 0.24
HDAC1-208ENST00000482310 GPR162Q16538 588 aa16.55■□□□□ 0.24
HDAC1-208ENST00000482310 DDX46Q7L014 1031 aaKnown RBP16.55■□□□□ 0.24
HDAC1-208ENST00000482310 SLC51AQ86UW1 340 aa16.55■□□□□ 0.24
HDAC1-208ENST00000482310 MASTLQ96GX5 879 aa16.55■□□□□ 0.24
HDAC1-208ENST00000482310 RBM17Q96I25 401 aaKnown RBP16.55■□□□□ 0.24
HDAC1-208ENST00000482310 YBX3P16989 372 aaKnown RBP eCLIP16.54■□□□□ 0.24
HDAC1-208ENST00000482310 ITGA6P23229 1130 aa16.54■□□□□ 0.24
HDAC1-208ENST00000482310 TGFB2P61812 414 aa16.54■□□□□ 0.24
HDAC1-208ENST00000482310 SF3B3Q15393 1217 aaKnown RBP16.54■□□□□ 0.24
HDAC1-208ENST00000482310 CRY2Q49AN0 593 aa16.54■□□□□ 0.24
HDAC1-208ENST00000482310 TAF7LQ5H9L4 462 aa16.54■□□□□ 0.24
HDAC1-208ENST00000482310 ZNF594Q96JF6 807 aaPredicted RBP16.54■□□□□ 0.24
HDAC1-208ENST00000482310 ZBTB40Q9NUA8 1239 aa16.54■□□□□ 0.24
HDAC1-208ENST00000482310 LRRC37AA6NMS7 1700 aa16.53■□□□□ 0.24
HDAC1-208ENST00000482310 KCNA3P22001 575 aa16.53■□□□□ 0.24
HDAC1-208ENST00000482310 KLHDC4Q8TBB5 520 aa16.53■□□□□ 0.24
HDAC1-208ENST00000482310 CELF1Q92879 486 aaKnown RBP16.53■□□□□ 0.24
HDAC1-208ENST00000482310 CHMP4BQ9H444 224 aaKnown RBP16.53■□□□□ 0.24
HDAC1-208ENST00000482310 HDAC5Q9UQL6 1122 aa16.53■□□□□ 0.24
HDAC1-208ENST00000482310 ANKRD18BA2A2Z9 1011 aa16.52■□□□□ 0.24
HDAC1-208ENST00000482310 KLRG2A4D1S0 409 aaPredicted RBP16.52■□□□□ 0.24
HDAC1-208ENST00000482310 SRGAP3O43295 1099 aa16.52■□□□□ 0.24
HDAC1-208ENST00000482310 CSF1RP07333 972 aa16.52■□□□□ 0.24
HDAC1-208ENST00000482310 IFIT5Q13325 482 aaKnown RBP16.52■□□□□ 0.24
HDAC1-208ENST00000482310 CCDC57Q2TAC2 916 aa16.52■□□□□ 0.24
HDAC1-208ENST00000482310 STYK1Q6J9G0 422 aa16.52■□□□□ 0.24
HDAC1-208ENST00000482310 PRPF40BQ6NWY9 871 aaKnown RBP16.52■□□□□ 0.24
HDAC1-208ENST00000482310 BCS1LQ9Y276 419 aa16.52■□□□□ 0.24
HDAC1-208ENST00000482310 PNMA6EA0A0J9YXQ4 647 aa16.51■□□□□ 0.23
HDAC1-208ENST00000482310 PPEF1O14829 653 aaPredicted RBP16.51■□□□□ 0.23
HDAC1-208ENST00000482310 GRAPQ13588 217 aa16.51■□□□□ 0.23
HDAC1-208ENST00000482310 RABL6Q3YEC7 729 aaPredicted RBP16.51■□□□□ 0.23
HDAC1-208ENST00000482310 CEP85Q6P2H3 762 aa16.51■□□□□ 0.23
HDAC1-208ENST00000482310 OLFM4Q6UX06 510 aa16.51■□□□□ 0.23
HDAC1-208ENST00000482310 GRAPLQ8TC17 118 aaPredicted RBP16.51■□□□□ 0.23
HDAC1-208ENST00000482310 SIL1Q9H173 461 aa16.51■□□□□ 0.23
HDAC1-208ENST00000482310 PIM2Q9P1W9 311 aa16.51■□□□□ 0.23
HDAC1-208ENST00000482310 PDZRN3Q9UPQ7 1066 aa16.51■□□□□ 0.23
HDAC1-208ENST00000482310 DALRD3Q5D0E6 543 aaKnown RBP16.5■□□□□ 0.23
HDAC1-208ENST00000482310 ANKRD18AQ8IVF6 992 aa16.5■□□□□ 0.23
HDAC1-208ENST00000482310 TTLL6Q8N841 843 aa16.5■□□□□ 0.23
HDAC1-208ENST00000482310 CNKSR1Q969H4 720 aa16.5■□□□□ 0.23
HDAC1-208ENST00000482310 CDC5LQ99459 802 aaKnown RBP16.5■□□□□ 0.23
HDAC1-208ENST00000482310 PA2G4Q9UQ80 394 aaKnown RBP16.5■□□□□ 0.23
HDAC1-208ENST00000482310 FER1L6Q2WGJ9 1857 aa16.5■□□□□ 0.23
HDAC1-208ENST00000482310 ALDH1B1P30837 517 aa16.49■□□□□ 0.23
HDAC1-208ENST00000482310 HOXA10P31260 410 aaPredicted RBP16.49■□□□□ 0.23
HDAC1-208ENST00000482310 IGHMBP2P38935 993 aaKnown RBP16.49■□□□□ 0.23
HDAC1-208ENST00000482310 CRAMP1Q96RY5 1269 aa16.49■□□□□ 0.23
HDAC1-208ENST00000482310 MPHOSPH8Q99549 860 aa16.49■□□□□ 0.23
HDAC1-208ENST00000482310 RTL9Q8NET4 1388 aa16.49■□□□□ 0.23
HDAC1-208ENST00000482310 C21orf2O43822 256 aa16.48■□□□□ 0.23
HDAC1-208ENST00000482310 BCL11AQ9H165 835 aa16.48■□□□□ 0.23
HDAC1-208ENST00000482310 CNNM1Q9NRU3 951 aa16.48■□□□□ 0.23
HDAC1-208ENST00000482310 PCDHB15Q9Y5E8 787 aa16.48■□□□□ 0.23
HDAC1-208ENST00000482310 RPS8P62241 208 aaKnown RBP16.47■□□□□ 0.23
HDAC1-208ENST00000482310 ATP8B2P98198 1209 aa16.47■□□□□ 0.23
HDAC1-208ENST00000482310 PUS3Q9BZE2 481 aaKnown RBP16.47■□□□□ 0.23
HDAC1-208ENST00000482310 RFX5P48382 616 aaPredicted RBP16.46■□□□□ 0.23
HDAC1-208ENST00000482310 LRRC24Q50LG9 513 aa16.46■□□□□ 0.23
HDAC1-208ENST00000482310 SIRT2Q8IXJ6 389 aa16.46■□□□□ 0.23
HDAC1-208ENST00000482310 LTBP1Q14766 1721 aa16.45■□□□□ 0.22
HDAC1-208ENST00000482310 MYH13Q9UKX3 1938 aa16.45■□□□□ 0.22
HDAC1-208ENST00000482310 APBB1O00213 710 aa16.45■□□□□ 0.22
HDAC1-208ENST00000482310 PTPN12Q05209 780 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms