RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 RBM46Q8TBY0 533 aaKnown RBP15.2■□□□□ 0.02
HMGN1-213ENST00000482192 JDP2Q8WYK2 163 aa15.2■□□□□ 0.02
HMGN1-213ENST00000482192 IGKV5-2P06315 115 aa15.19■□□□□ 0.02
HMGN1-213ENST00000482192 SLC51AQ86UW1 340 aa15.19■□□□□ 0.02
HMGN1-213ENST00000482192 SUPT20HQ8NEM7 779 aa15.19■□□□□ 0.02
HMGN1-213ENST00000482192 WDR90Q96KV7 1748 aa15.19■□□□□ 0.02
HMGN1-213ENST00000482192 CDHR2Q9BYE9 1310 aa15.18■□□□□ 0.02
HMGN1-213ENST00000482192 NEURL1BA8MQ27 555 aa15.18■□□□□ 0.02
HMGN1-213ENST00000482192 E9PSI1 815 aa15.18■□□□□ 0.02
HMGN1-213ENST00000482192 PDE8AO60658 829 aa15.18■□□□□ 0.02
HMGN1-213ENST00000482192 DDNO94850 711 aaPredicted RBP15.18■□□□□ 0.02
HMGN1-213ENST00000482192 CWF19L2Q2TBE0 894 aaKnown RBP15.18■□□□□ 0.02
HMGN1-213ENST00000482192 DPP8Q6V1X1 898 aaPredicted RBP15.18■□□□□ 0.02
HMGN1-213ENST00000482192 DNAAF4Q8WXU2 420 aa15.18■□□□□ 0.02
HMGN1-213ENST00000482192 VPS33BQ9H267 617 aa15.18■□□□□ 0.02
HMGN1-213ENST00000482192 ZNF541Q9H0D2 1346 aa15.17■□□□□ 0.02
HMGN1-213ENST00000482192 FZD9O00144 591 aa15.17■□□□□ 0.02
HMGN1-213ENST00000482192 HSPA6P17066 643 aa15.17■□□□□ 0.02
HMGN1-213ENST00000482192 FSTL1Q12841 308 aa15.17■□□□□ 0.02
HMGN1-213ENST00000482192 CCDC152Q4G0S7 254 aa15.17■□□□□ 0.02
HMGN1-213ENST00000482192 LARGE2Q8N3Y3 721 aa15.17■□□□□ 0.02
HMGN1-213ENST00000482192 MPNDQ8N594 471 aa15.17■□□□□ 0.02
HMGN1-213ENST00000482192 CELF1Q92879 486 aaKnown RBP15.17■□□□□ 0.02
HMGN1-213ENST00000482192 RTFDC1Q9BY42 306 aaPredicted RBP15.17■□□□□ 0.02
HMGN1-213ENST00000482192 POTECB2RU33 542 aa15.16■□□□□ 0.02
HMGN1-213ENST00000482192 PPIP5K2O43314 1243 aa15.16■□□□□ 0.02
HMGN1-213ENST00000482192 SMC1BQ8NDV3 1235 aa15.16■□□□□ 0.02
HMGN1-213ENST00000482192 LINS1Q8NG48 757 aa15.16■□□□□ 0.02
HMGN1-213ENST00000482192 JARID2Q92833 1246 aaPredicted RBP15.16■□□□□ 0.02
HMGN1-213ENST00000482192 L3MBTL3Q96JM7 780 aaPredicted RBP15.16■□□□□ 0.02
HMGN1-213ENST00000482192 LRRC37AA6NMS7 1700 aa15.16■□□□□ 0.02
HMGN1-213ENST00000482192 COL4A5P29400 1685 aa15.16■□□□□ 0.02
HMGN1-213ENST00000482192 IQCA1LA6NCM1 817 aa15.15■□□□□ 0.02
HMGN1-213ENST00000482192 EIF6P56537 245 aaKnown RBP15.15■□□□□ 0.02
HMGN1-213ENST00000482192 RPS8P62241 208 aaKnown RBP15.15■□□□□ 0.02
HMGN1-213ENST00000482192 GCKRQ14397 625 aa15.15■□□□□ 0.02
HMGN1-213ENST00000482192 DIEXFQ68CQ4 756 aaKnown RBP15.15■□□□□ 0.02
HMGN1-213ENST00000482192 NIM1KQ8IY84 436 aa15.15■□□□□ 0.02
HMGN1-213ENST00000482192 GPC2Q8N158 579 aa15.15■□□□□ 0.02
HMGN1-213ENST00000482192 CTSWP56202 376 aa15.14■□□□□ 0.01
HMGN1-213ENST00000482192 SLFN5Q08AF3 891 aa15.14■□□□□ 0.01
HMGN1-213ENST00000482192 AOC3Q16853 763 aa15.14■□□□□ 0.01
HMGN1-213ENST00000482192 UBE3BQ7Z3V4 1068 aa15.14■□□□□ 0.01
HMGN1-213ENST00000482192 COL4A1P02462 1669 aa15.13■□□□□ 0.01
HMGN1-213ENST00000482192 CACNA1FO60840 1977 aa15.13■□□□□ 0.01
HMGN1-213ENST00000482192 H7C1W4 665 aa15.13■□□□□ 0.01
HMGN1-213ENST00000482192 KIAA2012Q0VF49 1180 aa15.13■□□□□ 0.01
HMGN1-213ENST00000482192 SEC31BQ9NQW1 1179 aa15.13■□□□□ 0.01
HMGN1-213ENST00000482192 DUOX1Q9NRD9 1551 aa15.13■□□□□ 0.01
HMGN1-213ENST00000482192 NSFL1CQ9UNZ2 370 aaKnown RBP15.13■□□□□ 0.01
HMGN1-213ENST00000482192 F6X3S4 739 aa15.12■□□□□ 0.01
HMGN1-213ENST00000482192 CCDC85AQ96PX6 553 aaPredicted RBP15.12■□□□□ 0.01
HMGN1-213ENST00000482192 ZNRF3Q9ULT6 936 aa15.12■□□□□ 0.01
HMGN1-213ENST00000482192 TAF1P21675 1872 aa15.12■□□□□ 0.01
HMGN1-213ENST00000482192 RTL9Q8NET4 1388 aa15.11■□□□□ 0.01
HMGN1-213ENST00000482192 APLP1P51693 650 aa15.11■□□□□ 0.01
HMGN1-213ENST00000482192 GPSM2P81274 684 aa15.11■□□□□ 0.01
HMGN1-213ENST00000482192 BEND3Q5T5X7 828 aa15.11■□□□□ 0.01
HMGN1-213ENST00000482192 ANKRD18AQ8IVF6 992 aa15.11■□□□□ 0.01
HMGN1-213ENST00000482192 TTLL11Q8NHH1 800 aa15.11■□□□□ 0.01
HMGN1-213ENST00000482192 CDCA7LQ96GN5 454 aa15.11■□□□□ 0.01
HMGN1-213ENST00000482192 CDC5LQ99459 802 aaKnown RBP15.11■□□□□ 0.01
HMGN1-213ENST00000482192 HACL1Q9UJ83 578 aa15.11■□□□□ 0.01
HMGN1-213ENST00000482192 GJA3Q9Y6H8 435 aa15.11■□□□□ 0.01
HMGN1-213ENST00000482192 SCN4AP35499 1836 aa15.1■□□□□ 0.01
HMGN1-213ENST00000482192 CASP7P55210 303 aa15.1■□□□□ 0.01
HMGN1-213ENST00000482192 WASHC4Q2M389 1173 aa15.1■□□□□ 0.01
HMGN1-213ENST00000482192 MIER1Q8N108 512 aa15.1■□□□□ 0.01
HMGN1-213ENST00000482192 PLA2G12BQ9BX93 195 aa15.1■□□□□ 0.01
HMGN1-213ENST00000482192 TAF1DQ9H5J8 278 aaPredicted RBP15.1■□□□□ 0.01
HMGN1-213ENST00000482192 GREM2Q9H772 168 aa15.1■□□□□ 0.01
HMGN1-213ENST00000482192 LTBP1Q14766 1721 aa15.09■□□□□ 0.01
HMGN1-213ENST00000482192 C6orf229H3BNL8 230 aa15.09■□□□□ 0.01
HMGN1-213ENST00000482192 PNMA8AQ86V59 439 aaPredicted RBP15.09■□□□□ 0.01
HMGN1-213ENST00000482192 TRMT2AQ8IZ69 625 aaKnown RBP15.09■□□□□ 0.01
HMGN1-213ENST00000482192 MRPL50Q8N5N7 158 aaKnown RBP15.09■□□□□ 0.01
HMGN1-213ENST00000482192 EYA3Q99504 573 aa15.09■□□□□ 0.01
HMGN1-213ENST00000482192 PODXL2Q9NZ53 605 aa15.09■□□□□ 0.01
HMGN1-213ENST00000482192 ANKIB1Q9P2G1 1089 aa15.09■□□□□ 0.01
HMGN1-213ENST00000482192 LMOD1P29536 600 aaPredicted RBP15.08■□□□□ 0
HMGN1-213ENST00000482192 EPHX2P34913 555 aa15.08■□□□□ 0
HMGN1-213ENST00000482192 CHADLQ6NUI6 762 aa15.08■□□□□ 0
HMGN1-213ENST00000482192 SLC4A10Q6U841 1118 aa15.08■□□□□ 0
HMGN1-213ENST00000482192 TBC1D16Q8TBP0 767 aa15.08■□□□□ 0
HMGN1-213ENST00000482192 POLLQ9UGP5 575 aa15.08■□□□□ 0
HMGN1-213ENST00000482192 PTPRCP08575 1304 aa15.08■□□□□ 0
HMGN1-213ENST00000482192 GRM8O00222 908 aa15.07■□□□□ 0
HMGN1-213ENST00000482192 ALDH1L1O75891 902 aa15.07■□□□□ 0
HMGN1-213ENST00000482192 CT47B1P0C2W7 299 aaPredicted RBP15.07■□□□□ 0
HMGN1-213ENST00000482192 CXCL9Q07325 125 aa15.07■□□□□ 0
HMGN1-213ENST00000482192 ALDH1L2Q3SY69 923 aa15.07■□□□□ 0
HMGN1-213ENST00000482192 LDHDQ86WU2 507 aa15.07■□□□□ 0
HMGN1-213ENST00000482192 SSH1Q8WYL5 1049 aa15.07■□□□□ 0
HMGN1-213ENST00000482192 SRCIN1Q9C0H9 1055 aa15.07■□□□□ 0
HMGN1-213ENST00000482192 XDHP47989 1333 aa15.07■□□□□ 0
HMGN1-213ENST00000482192 MYH3P11055 1940 aa15.06■□□□□ 0
HMGN1-213ENST00000482192 RIMBP2O15034 1052 aa15.06■□□□□ 0
HMGN1-213ENST00000482192 UFL1O94874 794 aa15.06■□□□□ 0
HMGN1-213ENST00000482192 CSF1RP07333 972 aa15.06■□□□□ 0
HMGN1-213ENST00000482192 POTEIP0CG38 1075 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms