RNA–Protein interactions for RNA: ENST00000482050.1

DDR1-243, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-243ENST00000482050 SLC51AQ86UW1 340 aa21.98■■□□□ 1.11
DDR1-243ENST00000482050 CRAMP1Q96RY5 1269 aa21.98■■□□□ 1.11
DDR1-243ENST00000482050 NBPF7P0C2Y1 421 aaPredicted RBP21.97■■□□□ 1.11
DDR1-243ENST00000482050 CCDC152Q4G0S7 254 aa21.97■■□□□ 1.11
DDR1-243ENST00000482050 ARFGEF1Q9Y6D6 1849 aa21.96■■□□□ 1.11
DDR1-243ENST00000482050 SEC31BQ9NQW1 1179 aa21.96■■□□□ 1.11
DDR1-243ENST00000482050 PPEF1O14829 653 aaPredicted RBP21.95■■□□□ 1.1
DDR1-243ENST00000482050 TTLL11Q8NHH1 800 aa21.95■■□□□ 1.1
DDR1-243ENST00000482050 SUCLG2Q96I99 432 aa21.95■■□□□ 1.1
DDR1-243ENST00000482050 USP44Q9H0E7 712 aa21.95■■□□□ 1.1
DDR1-243ENST00000482050 GOLGB1Q14789 3259 aaKnown RBP21.95■■□□□ 1.1
DDR1-243ENST00000482050 TAF1P21675 1872 aa21.94■■□□□ 1.1
DDR1-243ENST00000482050 PLIN1O60240 522 aa21.94■■□□□ 1.1
DDR1-243ENST00000482050 GRAPQ13588 217 aa21.94■■□□□ 1.1
DDR1-243ENST00000482050 EPHA10Q5JZY3 1008 aa21.94■■□□□ 1.1
DDR1-243ENST00000482050 FTSJ3Q8IY81 847 aaKnown RBP21.94■■□□□ 1.1
DDR1-243ENST00000482050 GRAPLQ8TC17 118 aaPredicted RBP21.94■■□□□ 1.1
DDR1-243ENST00000482050 C7orf43Q8WVR3 580 aa21.94■■□□□ 1.1
DDR1-243ENST00000482050 CELF1Q92879 486 aaKnown RBP21.94■■□□□ 1.1
DDR1-243ENST00000482050 PLA2G12BQ9BX93 195 aa21.94■■□□□ 1.1
DDR1-243ENST00000482050 GREM2Q9H772 168 aa21.94■■□□□ 1.1
DDR1-243ENST00000482050 UTYO14607 1347 aa21.93■■□□□ 1.1
DDR1-243ENST00000482050 COL4A1P02462 1669 aa21.93■■□□□ 1.1
DDR1-243ENST00000482050 FOXO4P98177 505 aa21.93■■□□□ 1.1
DDR1-243ENST00000482050 RASSF7Q02833 373 aa21.93■■□□□ 1.1
DDR1-243ENST00000482050 INTS3Q68E01 1043 aaKnown RBP21.93■■□□□ 1.1
DDR1-243ENST00000482050 TMEM57Q8N5G2 664 aa21.93■■□□□ 1.1
DDR1-243ENST00000482050 CHMP3Q9Y3E7 222 aa21.93■■□□□ 1.1
DDR1-243ENST00000482050 RLBP1P12271 317 aa21.92■■□□□ 1.1
DDR1-243ENST00000482050 FAM161AQ3B820 660 aa21.92■■□□□ 1.1
DDR1-243ENST00000482050 DZIP1LQ8IYY4 767 aaKnown RBP21.92■■□□□ 1.1
DDR1-243ENST00000482050 MYH3P11055 1940 aa21.91■■□□□ 1.1
DDR1-243ENST00000482050 BBOX1O75936 387 aa21.91■■□□□ 1.1
DDR1-243ENST00000482050 CCDC93Q567U6 631 aa21.91■■□□□ 1.1
DDR1-243ENST00000482050 LMBR1LQ6UX01 489 aa21.91■■□□□ 1.1
DDR1-243ENST00000482050 KAZALD1Q96I82 304 aa21.91■■□□□ 1.1
DDR1-243ENST00000482050 MEIS3Q99687 375 aa21.91■■□□□ 1.1
DDR1-243ENST00000482050 SOGA3Q5TF21 947 aa21.9■■□□□ 1.1
DDR1-243ENST00000482050 PANK1Q8TE04 598 aa21.9■■□□□ 1.1
DDR1-243ENST00000482050 BICC1Q9H694 974 aaKnown RBP21.9■■□□□ 1.1
DDR1-243ENST00000482050 NFKBIEO00221 500 aa21.89■■□□□ 1.09
DDR1-243ENST00000482050 CSF1RP07333 972 aa21.89■■□□□ 1.09
DDR1-243ENST00000482050 UBTFL1P0CB47 393 aaPredicted RBP21.89■■□□□ 1.09
DDR1-243ENST00000482050 ITGA6P23229 1130 aa21.89■■□□□ 1.09
DDR1-243ENST00000482050 RPS8P62241 208 aaKnown RBP21.89■■□□□ 1.09
DDR1-243ENST00000482050 ATP6V0A2Q9Y487 856 aa21.89■■□□□ 1.09
DDR1-243ENST00000482050 ITPRIPQ8IWB1 547 aa21.88■■□□□ 1.09
DDR1-243ENST00000482050 TMX4Q9H1E5 349 aaPredicted RBP21.88■■□□□ 1.09
DDR1-243ENST00000482050 ANKRD18AQ8IVF6 992 aa21.87■■□□□ 1.09
DDR1-243ENST00000482050 CDC5LQ99459 802 aaKnown RBP21.87■■□□□ 1.09
DDR1-243ENST00000482050 RTL9Q8NET4 1388 aa21.87■■□□□ 1.09
DDR1-243ENST00000482050 SP8Q8IXZ3 490 aa21.86■■□□□ 1.09
DDR1-243ENST00000482050 ANKRD44Q8N8A2 993 aa21.86■■□□□ 1.09
DDR1-243ENST00000482050 TAOK3Q9H2K8 898 aa21.86■■□□□ 1.09
DDR1-243ENST00000482050 UTRNP46939 3433 aa21.86■■□□□ 1.09
DDR1-243ENST00000482050 ANKRD18BA2A2Z9 1011 aa21.85■■□□□ 1.09
DDR1-243ENST00000482050 PRELPP51888 382 aa21.85■■□□□ 1.09
DDR1-243ENST00000482050 IFIT5Q13325 482 aaKnown RBP21.85■■□□□ 1.09
DDR1-243ENST00000482050 CC2D2BQ6DHV5 1058 aa21.85■■□□□ 1.09
DDR1-243ENST00000482050 RTKN2Q8IZC4 609 aa21.85■■□□□ 1.09
DDR1-243ENST00000482050 LRRFIP2Q9Y608 721 aaKnown RBP21.85■■□□□ 1.09
DDR1-243ENST00000482050 FER1L6Q2WGJ9 1857 aa21.84■■□□□ 1.09
DDR1-243ENST00000482050 GNAI3P08754 354 aa21.84■■□□□ 1.09
DDR1-243ENST00000482050 CCDC57Q2TAC2 916 aa21.84■■□□□ 1.09
DDR1-243ENST00000482050 C9orf131Q5VYM1 1079 aa21.84■■□□□ 1.09
DDR1-243ENST00000482050 TMC4Q7Z404 712 aa21.84■■□□□ 1.09
DDR1-243ENST00000482050 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.84■■□□□ 1.09
DDR1-243ENST00000482050 RNF181Q9P0P0 153 aa21.84■■□□□ 1.09
DDR1-243ENST00000482050 MS4A1P11836 297 aa21.83■■□□□ 1.09
DDR1-243ENST00000482050 IGHMBP2P38935 993 aaKnown RBP21.83■■□□□ 1.09
DDR1-243ENST00000482050 FKBP4Q02790 459 aaKnown RBP eCLIP21.83■■□□□ 1.09
DDR1-243ENST00000482050 RABL6Q3YEC7 729 aaPredicted RBP21.83■■□□□ 1.09
DDR1-243ENST00000482050 TAF7LQ5H9L4 462 aa21.83■■□□□ 1.09
DDR1-243ENST00000482050 C20orf194Q5TEA3 1177 aa21.83■■□□□ 1.09
DDR1-243ENST00000482050 ZNF594Q96JF6 807 aaPredicted RBP21.83■■□□□ 1.09
DDR1-243ENST00000482050 ZNF277Q9NRM2 450 aaPredicted RBP21.83■■□□□ 1.09
DDR1-243ENST00000482050 SPEF2Q9C093 1822 aa21.83■■□□□ 1.08
DDR1-243ENST00000482050 SNED1Q8TER0 1413 aa21.82■■□□□ 1.08
DDR1-243ENST00000482050 DPP8Q6V1X1 898 aaPredicted RBP21.82■■□□□ 1.08
DDR1-243ENST00000482050 MPNDQ8N594 471 aa21.82■■□□□ 1.08
DDR1-243ENST00000482050 MPHOSPH8Q99549 860 aa21.82■■□□□ 1.08
DDR1-243ENST00000482050 NSFL1CQ9UNZ2 370 aaKnown RBP21.82■■□□□ 1.08
DDR1-243ENST00000482050 COG6Q9Y2V7 657 aa21.82■■□□□ 1.08
DDR1-243ENST00000482050 CHD4Q14839 1912 aa21.82■■□□□ 1.08
DDR1-243ENST00000482050 LMNB1P20700 586 aa21.81■■□□□ 1.08
DDR1-243ENST00000482050 GPSM2P81274 684 aa21.81■■□□□ 1.08
DDR1-243ENST00000482050 LTBP3Q9NS15 1303 aa21.8■■□□□ 1.08
DDR1-243ENST00000482050 YY1P25490 414 aa21.8■■□□□ 1.08
DDR1-243ENST00000482050 BSDC1Q9NW68 430 aaPredicted RBP21.8■■□□□ 1.08
DDR1-243ENST00000482050 GNAI2P04899 355 aa21.79■■□□□ 1.08
DDR1-243ENST00000482050 GRIPAP1Q4V328 841 aa21.79■■□□□ 1.08
DDR1-243ENST00000482050 PSMD1Q99460 953 aa21.79■■□□□ 1.08
DDR1-243ENST00000482050 C1orf115Q9H7X2 142 aa21.79■■□□□ 1.08
DDR1-243ENST00000482050 ANKIB1Q9P2G1 1089 aa21.79■■□□□ 1.08
DDR1-243ENST00000482050 HDAC5Q9UQL6 1122 aa21.79■■□□□ 1.08
DDR1-243ENST00000482050 LRRC37AA6NMS7 1700 aa21.79■■□□□ 1.08
DDR1-243ENST00000482050 SBF1O95248 1867 aa21.78■■□□□ 1.08
DDR1-243ENST00000482050 ZBTB7BO15156 539 aaPredicted RBP21.78■■□□□ 1.08
DDR1-243ENST00000482050 RRP1P56182 461 aaKnown RBP21.78■■□□□ 1.08
DDR1-243ENST00000482050 MVPQ14764 893 aaKnown RBP21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms