RNA–Protein interactions for RNA: ENST00000481628.1

CLIP4-210, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 425 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-210ENST00000481628 DPP8Q6V1X1 898 aaPredicted RBP11.9□□□□□ -0.5
CLIP4-210ENST00000481628 CCDC146Q8IYE0 955 aa11.9□□□□□ -0.5
CLIP4-210ENST00000481628 MPNDQ8N594 471 aa11.9□□□□□ -0.5
CLIP4-210ENST00000481628 CFAP44Q96MT7 982 aa11.9□□□□□ -0.5
CLIP4-210ENST00000481628 DBF4Q9UBU7 674 aaPredicted RBP11.9□□□□□ -0.5
CLIP4-210ENST00000481628 PGAP2Q9UHJ9 254 aa11.9□□□□□ -0.5
CLIP4-210ENST00000481628 TRMT112Q9UI30 125 aaKnown RBP11.9□□□□□ -0.5
CLIP4-210ENST00000481628 WDR33Q9C0J8 1336 aaKnown RBP11.89□□□□□ -0.51
CLIP4-210ENST00000481628 TCERG1O14776 1098 aaKnown RBP11.89□□□□□ -0.51
CLIP4-210ENST00000481628 ZNF853P0CG23 659 aa11.89□□□□□ -0.51
CLIP4-210ENST00000481628 TRIM28Q13263 835 aaKnown RBP11.89□□□□□ -0.51
CLIP4-210ENST00000481628 SF3B3Q15393 1217 aaKnown RBP11.89□□□□□ -0.51
CLIP4-210ENST00000481628 DDX46Q7L014 1031 aaKnown RBP11.89□□□□□ -0.51
CLIP4-210ENST00000481628 NECTIN2Q92692 538 aa11.89□□□□□ -0.51
CLIP4-210ENST00000481628 AIDAQ96BJ3 306 aa11.89□□□□□ -0.51
CLIP4-210ENST00000481628 COL4A1P02462 1669 aa11.89□□□□□ -0.51
CLIP4-210ENST00000481628 MAP2K1Q02750 393 aaPredicted RBP11.88□□□□□ -0.51
CLIP4-210ENST00000481628 DDX10Q13206 875 aaKnown RBP11.88□□□□□ -0.51
CLIP4-210ENST00000481628 WDR43Q15061 677 aaKnown RBP eCLIP11.88□□□□□ -0.51
CLIP4-210ENST00000481628 CST9Q5W186 159 aa11.88□□□□□ -0.51
CLIP4-210ENST00000481628 CIAPIN1Q6FI81 312 aa11.88□□□□□ -0.51
CLIP4-210ENST00000481628 ANKRD13DQ6ZTN6 518 aa11.88□□□□□ -0.51
CLIP4-210ENST00000481628 ZC3H15Q8WU90 426 aaKnown RBP11.88□□□□□ -0.51
CLIP4-210ENST00000481628 ADAMTS8Q9UP79 889 aa11.88□□□□□ -0.51
CLIP4-210ENST00000481628 TLL2Q9Y6L7 1015 aa11.88□□□□□ -0.51
CLIP4-210ENST00000481628 TAF1P21675 1872 aa11.87□□□□□ -0.51
CLIP4-210ENST00000481628 YDJCA8MPS7 323 aa11.87□□□□□ -0.51
CLIP4-210ENST00000481628 CAPN15O75808 1086 aa11.87□□□□□ -0.51
CLIP4-210ENST00000481628 HSPA8P11142 646 aaKnown RBP11.87□□□□□ -0.51
CLIP4-210ENST00000481628 ZEB1P37275 1124 aaPredicted RBP11.87□□□□□ -0.51
CLIP4-210ENST00000481628 GMPSP49915 693 aaPredicted RBP11.87□□□□□ -0.51
CLIP4-210ENST00000481628 FMR1Q06787 632 aaKnown RBP eCLIP11.87□□□□□ -0.51
CLIP4-210ENST00000481628 NEUROD2Q15784 382 aa11.87□□□□□ -0.51
CLIP4-210ENST00000481628 HHIPL1Q96JK4 782 aa11.87□□□□□ -0.51
CLIP4-210ENST00000481628 HYPKQ9NX55 129 aa11.87□□□□□ -0.51
CLIP4-210ENST00000481628 ABT1Q9ULW3 272 aaKnown RBP11.87□□□□□ -0.51
CLIP4-210ENST00000481628 ZNF609O15014 1411 aa11.86□□□□□ -0.51
CLIP4-210ENST00000481628 TRAF5O00463 557 aa11.86□□□□□ -0.51
CLIP4-210ENST00000481628 ECE1P42892 770 aa11.86□□□□□ -0.51
CLIP4-210ENST00000481628 TNIP1Q15025 636 aa11.86□□□□□ -0.51
CLIP4-210ENST00000481628 DUSP27Q5VZP5 1158 aa11.86□□□□□ -0.51
CLIP4-210ENST00000481628 CAPNS2Q96L46 248 aa11.86□□□□□ -0.51
CLIP4-210ENST00000481628 PRKRIP1Q9H875 184 aaPredicted RBP11.86□□□□□ -0.51
CLIP4-210ENST00000481628 MBIPQ9NS73 344 aa11.86□□□□□ -0.51
CLIP4-210ENST00000481628 LBX1P52954 281 aa11.85□□□□□ -0.51
CLIP4-210ENST00000481628 HIRAP54198 1017 aaPredicted RBP11.85□□□□□ -0.51
CLIP4-210ENST00000481628 DPF2Q92785 391 aa11.85□□□□□ -0.51
CLIP4-210ENST00000481628 CELF1Q92879 486 aaKnown RBP11.85□□□□□ -0.51
CLIP4-210ENST00000481628 FAM89AQ96GI7 184 aa11.85□□□□□ -0.51
CLIP4-210ENST00000481628 IFT57Q9NWB7 429 aa11.85□□□□□ -0.51
CLIP4-210ENST00000481628 LAS1LQ9Y4W2 734 aaKnown RBP11.85□□□□□ -0.51
CLIP4-210ENST00000481628 RAD17O75943 681 aa11.84□□□□□ -0.51
CLIP4-210ENST00000481628 SAPCD2Q86UD0 394 aa11.84□□□□□ -0.51
CLIP4-210ENST00000481628 TRPM4Q8TD43 1214 aa11.84□□□□□ -0.51
CLIP4-210ENST00000481628 ATP5J2-PTCD1G3V325 749 aa11.83□□□□□ -0.52
CLIP4-210ENST00000481628 IRS4O14654 1257 aaPredicted RBP11.83□□□□□ -0.52
CLIP4-210ENST00000481628 RPS12P25398 132 aaKnown RBP11.83□□□□□ -0.52
CLIP4-210ENST00000481628 MAP2K2P36507 400 aa11.83□□□□□ -0.52
CLIP4-210ENST00000481628 CALD1Q05682 793 aaKnown RBP11.83□□□□□ -0.52
CLIP4-210ENST00000481628 WASHC4Q2M389 1173 aa11.83□□□□□ -0.52
CLIP4-210ENST00000481628 CYP4F22Q6NT55 531 aa11.83□□□□□ -0.52
CLIP4-210ENST00000481628 ZBTB38Q8NAP3 1195 aaPredicted RBP11.83□□□□□ -0.52
CLIP4-210ENST00000481628 GLIS2Q9BZE0 524 aaPredicted RBP11.83□□□□□ -0.52
CLIP4-210ENST00000481628 PODXL2Q9NZ53 605 aa11.83□□□□□ -0.52
CLIP4-210ENST00000481628 POLLQ9UGP5 575 aa11.83□□□□□ -0.52
CLIP4-210ENST00000481628 CNOT7Q9UIV1 285 aaKnown RBP11.83□□□□□ -0.52
CLIP4-210ENST00000481628 RTL9Q8NET4 1388 aa11.82□□□□□ -0.52
CLIP4-210ENST00000481628 CELF2O95319 508 aaKnown RBP11.82□□□□□ -0.52
CLIP4-210ENST00000481628 HSP90B1P14625 803 aaKnown RBP11.82□□□□□ -0.52
CLIP4-210ENST00000481628 GNAI1P63096 354 aa11.82□□□□□ -0.52
CLIP4-210ENST00000481628 GPSM2P81274 684 aa11.82□□□□□ -0.52
CLIP4-210ENST00000481628 GOLGA2Q08379 1002 aa11.82□□□□□ -0.52
CLIP4-210ENST00000481628 CDC37L1Q7L3B6 337 aa11.82□□□□□ -0.52
CLIP4-210ENST00000481628 MICALL2Q8IY33 904 aa11.82□□□□□ -0.52
CLIP4-210ENST00000481628 GPR101Q96P66 508 aaPredicted RBP11.82□□□□□ -0.52
CLIP4-210ENST00000481628 BCL2L13Q9BXK5 485 aa11.82□□□□□ -0.52
CLIP4-210ENST00000481628 PSME4Q14997 1843 aa11.81□□□□□ -0.52
CLIP4-210ENST00000481628 SHTN1A0MZ66 631 aa11.81□□□□□ -0.52
CLIP4-210ENST00000481628 H7C1D1 291 aa11.81□□□□□ -0.52
CLIP4-210ENST00000481628 PSMD14O00487 310 aa11.81□□□□□ -0.52
CLIP4-210ENST00000481628 APAF1O14727 1248 aa11.81□□□□□ -0.52
CLIP4-210ENST00000481628 PCCAP05165 728 aaPredicted RBP11.81□□□□□ -0.52
CLIP4-210ENST00000481628 RPS8P62241 208 aaKnown RBP11.81□□□□□ -0.52
CLIP4-210ENST00000481628 CCDC191Q8NCU4 936 aa11.81□□□□□ -0.52
CLIP4-210ENST00000481628 TBC1D16Q8TBP0 767 aa11.81□□□□□ -0.52
CLIP4-210ENST00000481628 EYA3Q99504 573 aa11.81□□□□□ -0.52
CLIP4-210ENST00000481628 PHAXQ9H814 394 aaKnown RBP11.81□□□□□ -0.52
CLIP4-210ENST00000481628 NSFL1CQ9UNZ2 370 aaKnown RBP11.81□□□□□ -0.52
CLIP4-210ENST00000481628 SCN9AQ15858 1988 aa11.81□□□□□ -0.52
CLIP4-210ENST00000481628 CA12O43570 354 aa11.8□□□□□ -0.52
CLIP4-210ENST00000481628 ECE2O60344 883 aa11.8□□□□□ -0.52
CLIP4-210ENST00000481628 BRPF1P55201 1214 aaPredicted RBP11.8□□□□□ -0.52
CLIP4-210ENST00000481628 RIC3Q7Z5B4 369 aa11.8□□□□□ -0.52
CLIP4-210ENST00000481628 CHMP4AQ9BY43 222 aa11.8□□□□□ -0.52
CLIP4-210ENST00000481628 DBNDD1Q9H9R9 158 aa11.8□□□□□ -0.52
CLIP4-210ENST00000481628 ZBTB12Q9Y330 459 aaPredicted RBP11.8□□□□□ -0.52
CLIP4-210ENST00000481628 C6orf229H3BNL8 230 aa11.79□□□□□ -0.52
CLIP4-210ENST00000481628 PDE8AO60658 829 aa11.79□□□□□ -0.52
CLIP4-210ENST00000481628 AOC2O75106 756 aa11.79□□□□□ -0.52
CLIP4-210ENST00000481628 VIL1P09327 827 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms