RNA–Protein interactions for RNA: ENST00000481613.1

GGA1-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-219	ENST00000481613	MCOLN1	Q9GZU1	580 aa		13.58	□□□□□ -0.24
GGA1-219	ENST00000481613	IFT57	Q9NWB7	429 aa		13.58	□□□□□ -0.24
GGA1-219	ENST00000481613	HYPK	Q9NX55	129 aa		13.58	□□□□□ -0.24
GGA1-219	ENST00000481613	PGAP2	Q9UHJ9	254 aa		13.58	□□□□□ -0.24
GGA1-219	ENST00000481613	GJA3	Q9Y6H8	435 aa		13.58	□□□□□ -0.24
GGA1-219	ENST00000481613	APAF1	O14727	1248 aa		13.57	□□□□□ -0.24
GGA1-219	ENST00000481613	ANXA1	P04083	346 aa		13.57	□□□□□ -0.24
GGA1-219	ENST00000481613	ZNF853	P0CG23	659 aa		13.57	□□□□□ -0.24
GGA1-219	ENST00000481613	MAP2K2	P36507	400 aa		13.57	□□□□□ -0.24
GGA1-219	ENST00000481613	PLBD2	Q8NHP8	589 aa		13.57	□□□□□ -0.24
GGA1-219	ENST00000481613	JDP2	Q8WYK2	163 aa		13.57	□□□□□ -0.24
GGA1-219	ENST00000481613	DUSP27	Q5VZP5	1158 aa		13.56	□□□□□ -0.24
GGA1-219	ENST00000481613	DLK2	Q6UY11	383 aa		13.56	□□□□□ -0.24
GGA1-219	ENST00000481613	ANKRD13D	Q6ZTN6	518 aa		13.56	□□□□□ -0.24
GGA1-219	ENST00000481613	USP50	Q70EL3	339 aa	Predicted RBP	13.56	□□□□□ -0.24
GGA1-219	ENST00000481613	NLRP10	Q86W26	655 aa		13.56	□□□□□ -0.24
GGA1-219	ENST00000481613	VPS33B	Q9H267	617 aa		13.56	□□□□□ -0.24
GGA1-219	ENST00000481613	CHPF2	Q9P2E5	772 aa		13.56	□□□□□ -0.24
GGA1-219	ENST00000481613	CASP8AP2	Q9UKL3	1982 aa		13.56	□□□□□ -0.24
GGA1-219	ENST00000481613	PPEF1	O14829	653 aa	Predicted RBP	13.55	□□□□□ -0.24
GGA1-219	ENST00000481613	BBOX1	O75936	387 aa		13.55	□□□□□ -0.24
GGA1-219	ENST00000481613	CXCL9	Q07325	125 aa		13.55	□□□□□ -0.24
GGA1-219	ENST00000481613	KRT24	Q2M2I5	525 aa		13.55	□□□□□ -0.24
GGA1-219	ENST00000481613	MBIP	Q9NS73	344 aa		13.55	□□□□□ -0.24
GGA1-219	ENST00000481613	TRMT112	Q9UI30	125 aa	Known RBP	13.55	□□□□□ -0.24
GGA1-219	ENST00000481613	ECE1	P42892	770 aa		13.54	□□□□□ -0.24
GGA1-219	ENST00000481613	EIF6	P56537	245 aa	Known RBP	13.54	□□□□□ -0.24
GGA1-219	ENST00000481613	GRM1	Q13255	1194 aa		13.54	□□□□□ -0.24
GGA1-219	ENST00000481613	NCBP3	Q53F19	620 aa	Known RBP	13.54	□□□□□ -0.24
GGA1-219	ENST00000481613	GLIS2	Q9BZE0	524 aa	Predicted RBP	13.54	□□□□□ -0.24
GGA1-219	ENST00000481613	GPRC5D	Q9NZD1	345 aa		13.54	□□□□□ -0.24
GGA1-219	ENST00000481613	SH3TC1	Q8TE82	1336 aa		13.54	□□□□□ -0.24
GGA1-219	ENST00000481613	SHTN1	A0MZ66	631 aa		13.53	□□□□□ -0.24
GGA1-219	ENST00000481613	TRIM28	Q13263	835 aa	Known RBP	13.53	□□□□□ -0.24
GGA1-219	ENST00000481613	DDX46	Q7L014	1031 aa	Known RBP	13.53	□□□□□ -0.24
GGA1-219	ENST00000481613	TMC4	Q7Z404	712 aa		13.53	□□□□□ -0.24
GGA1-219	ENST00000481613	SUPT20H	Q8NEM7	779 aa		13.53	□□□□□ -0.24
GGA1-219	ENST00000481613	ATP6V0A2	Q9Y487	856 aa		13.53	□□□□□ -0.24
GGA1-219	ENST00000481613	NUP98	P52948	1817 aa		13.53	□□□□□ -0.24
GGA1-219	ENST00000481613	HSP90B1	P14625	803 aa	Known RBP	13.52	□□□□□ -0.25
GGA1-219	ENST00000481613	CCDC27	Q2M243	656 aa		13.52	□□□□□ -0.25
GGA1-219	ENST00000481613	SP8	Q8IXZ3	490 aa		13.52	□□□□□ -0.25
GGA1-219	ENST00000481613	LARGE2	Q8N3Y3	721 aa		13.52	□□□□□ -0.25
GGA1-219	ENST00000481613	HHIPL1	Q96JK4	782 aa		13.52	□□□□□ -0.25
GGA1-219	ENST00000481613	ISCA1	Q9BUE6	129 aa		13.52	□□□□□ -0.25
GGA1-219	ENST00000481613	PDE4DIP	Q5VU43	2346 aa		13.52	□□□□□ -0.25
GGA1-219	ENST00000481613	TRPM7	Q96QT4	1865 aa		13.51	□□□□□ -0.25
GGA1-219	ENST00000481613	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.51	□□□□□ -0.25
GGA1-219	ENST00000481613	TCERG1	O14776	1098 aa	Known RBP	13.51	□□□□□ -0.25
GGA1-219	ENST00000481613	ANP32C	O43423	234 aa		13.51	□□□□□ -0.25
GGA1-219	ENST00000481613	CELF2	O95319	508 aa	Known RBP	13.51	□□□□□ -0.25
GGA1-219	ENST00000481613	GOLGA2	Q08379	1002 aa		13.51	□□□□□ -0.25
GGA1-219	ENST00000481613	CCDC30	Q5VVM6	783 aa		13.51	□□□□□ -0.25
GGA1-219	ENST00000481613	CIAPIN1	Q6FI81	312 aa		13.51	□□□□□ -0.25
GGA1-219	ENST00000481613	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.51	□□□□□ -0.25
GGA1-219	ENST00000481613	ADARB2	Q9NS39	739 aa	Known RBP	13.51	□□□□□ -0.25
GGA1-219	ENST00000481613	ABCC4	O15439	1325 aa		13.5	□□□□□ -0.25
GGA1-219	ENST00000481613	DDX58	O95786	925 aa	Known RBP	13.5	□□□□□ -0.25
GGA1-219	ENST00000481613	HCLS1	P14317	486 aa	Predicted RBP	13.5	□□□□□ -0.25
GGA1-219	ENST00000481613	LMOD1	P29536	600 aa	Predicted RBP	13.5	□□□□□ -0.25
GGA1-219	ENST00000481613	BRPF1	P55201	1214 aa	Predicted RBP	13.5	□□□□□ -0.25
GGA1-219	ENST00000481613	GRAP	Q13588	217 aa		13.5	□□□□□ -0.25
GGA1-219	ENST00000481613	AOC3	Q16853	763 aa		13.5	□□□□□ -0.25
GGA1-219	ENST00000481613	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.5	□□□□□ -0.25
GGA1-219	ENST00000481613	RIC3	Q7Z5B4	369 aa		13.5	□□□□□ -0.25
GGA1-219	ENST00000481613	GRAPL	Q8TC17	118 aa	Predicted RBP	13.5	□□□□□ -0.25
GGA1-219	ENST00000481613	TRPM4	Q8TD43	1214 aa		13.5	□□□□□ -0.25
GGA1-219	ENST00000481613	YDJC	A8MPS7	323 aa		13.49	□□□□□ -0.25
GGA1-219	ENST00000481613	FAM155A	B1AL88	458 aa	Predicted RBP	13.49	□□□□□ -0.25
GGA1-219	ENST00000481613	GMPS	P49915	693 aa	Predicted RBP	13.49	□□□□□ -0.25
GGA1-219	ENST00000481613	DGKZ	Q13574	1117 aa		13.49	□□□□□ -0.25
GGA1-219	ENST00000481613	NIM1K	Q8IY84	436 aa		13.49	□□□□□ -0.25
GGA1-219	ENST00000481613	BEGAIN	Q9BUH8	593 aa		13.49	□□□□□ -0.25
GGA1-219	ENST00000481613	ELL2	O00472	640 aa	Predicted RBP	13.48	□□□□□ -0.25
GGA1-219	ENST00000481613	PPIP5K2	O43314	1243 aa		13.48	□□□□□ -0.25
GGA1-219	ENST00000481613	SF3B3	Q15393	1217 aa	Known RBP	13.48	□□□□□ -0.25
GGA1-219	ENST00000481613	DPP8	Q6V1X1	898 aa	Predicted RBP	13.48	□□□□□ -0.25
GGA1-219	ENST00000481613	MPND	Q8N594	471 aa		13.48	□□□□□ -0.25
GGA1-219	ENST00000481613	ZNRF3	Q9ULT6	936 aa		13.48	□□□□□ -0.25
GGA1-219	ENST00000481613	IL16	Q14005	1332 aa		13.47	□□□□□ -0.25
GGA1-219	ENST00000481613	ATP5J2-PTCD1	G3V325	749 aa		13.47	□□□□□ -0.25
GGA1-219	ENST00000481613	CA12	O43570	354 aa		13.47	□□□□□ -0.25
GGA1-219	ENST00000481613	EGFR	P00533	1210 aa		13.47	□□□□□ -0.25
GGA1-219	ENST00000481613	WWC1	Q8IX03	1113 aa		13.47	□□□□□ -0.25
GGA1-219	ENST00000481613	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.47	□□□□□ -0.25
GGA1-219	ENST00000481613	C8orf58	Q8NAV2	365 aa		13.47	□□□□□ -0.25
GGA1-219	ENST00000481613	CCDC191	Q8NCU4	936 aa		13.47	□□□□□ -0.25
GGA1-219	ENST00000481613	FAM89A	Q96GI7	184 aa		13.47	□□□□□ -0.25
GGA1-219	ENST00000481613	MRS2	Q9HD23	443 aa		13.47	□□□□□ -0.25
GGA1-219	ENST00000481613	IRS4	O14654	1257 aa	Predicted RBP	13.46	□□□□□ -0.25
GGA1-219	ENST00000481613	USP48	Q86UV5	1035 aa		13.46	□□□□□ -0.25
GGA1-219	ENST00000481613	ZC3H15	Q8WU90	426 aa	Known RBP	13.46	□□□□□ -0.25
GGA1-219	ENST00000481613	STK31	Q9BXU1	1019 aa		13.46	□□□□□ -0.25
GGA1-219	ENST00000481613	PHAX	Q9H814	394 aa	Known RBP	13.46	□□□□□ -0.25
GGA1-219	ENST00000481613	RAD17	O75943	681 aa		13.45	□□□□□ -0.26
GGA1-219	ENST00000481613	KIAA2012	Q0VF49	1180 aa		13.45	□□□□□ -0.26
GGA1-219	ENST00000481613	CCDC184	Q52MB2	194 aa		13.45	□□□□□ -0.26
GGA1-219	ENST00000481613	METTL22	Q9BUU2	404 aa	Predicted RBP	13.45	□□□□□ -0.26
GGA1-219	ENST00000481613	CNOT7	Q9UIV1	285 aa	Known RBP	13.45	□□□□□ -0.26
GGA1-219	ENST00000481613	PCCA	P05165	728 aa	Predicted RBP	13.44	□□□□□ -0.26

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