RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 MYH3P11055 1940 aa13.54□□□□□ -0.24
SSBP1-210ENST00000481508 RIC1Q4ADV7 1423 aa13.54□□□□□ -0.24
SSBP1-210ENST00000481508 DDX58O95786 925 aaKnown RBP13.53□□□□□ -0.24
SSBP1-210ENST00000481508 SRGNP10124 158 aa13.53□□□□□ -0.24
SSBP1-210ENST00000481508 CWF19L2Q2TBE0 894 aaKnown RBP13.53□□□□□ -0.24
SSBP1-210ENST00000481508 RTL5Q5HYW3 569 aaPredicted RBP13.53□□□□□ -0.24
SSBP1-210ENST00000481508 PPP1R42Q7Z4L9 355 aa13.53□□□□□ -0.24
SSBP1-210ENST00000481508 CHMP4AQ9BY43 222 aa13.53□□□□□ -0.24
SSBP1-210ENST00000481508 NYXQ9GZU5 481 aa13.53□□□□□ -0.24
SSBP1-210ENST00000481508 KLRG2A4D1S0 409 aaPredicted RBP13.52□□□□□ -0.25
SSBP1-210ENST00000481508 FOXN1O15353 648 aa13.52□□□□□ -0.25
SSBP1-210ENST00000481508 HCLS1P14317 486 aaPredicted RBP13.52□□□□□ -0.25
SSBP1-210ENST00000481508 GTF2E1P29083 439 aaPredicted RBP13.52□□□□□ -0.25
SSBP1-210ENST00000481508 PDE6BP35913 854 aa13.52□□□□□ -0.25
SSBP1-210ENST00000481508 TRIM28Q13263 835 aaKnown RBP13.52□□□□□ -0.25
SSBP1-210ENST00000481508 SMC1BQ8NDV3 1235 aa13.52□□□□□ -0.25
SSBP1-210ENST00000481508 ZNF622Q969S3 477 aaKnown RBP eCLIP13.52□□□□□ -0.25
SSBP1-210ENST00000481508 FAM89AQ96GI7 184 aa13.52□□□□□ -0.25
SSBP1-210ENST00000481508 PIM2Q9P1W9 311 aa13.52□□□□□ -0.25
SSBP1-210ENST00000481508 TRMT112Q9UI30 125 aaKnown RBP13.52□□□□□ -0.25
SSBP1-210ENST00000481508 FER1L6Q2WGJ9 1857 aa13.52□□□□□ -0.25
SSBP1-210ENST00000481508 SPEF2Q9C093 1822 aa13.51□□□□□ -0.25
SSBP1-210ENST00000481508 NEURL1BA8MQ27 555 aa13.51□□□□□ -0.25
SSBP1-210ENST00000481508 H0YIN7 160 aa13.51□□□□□ -0.25
SSBP1-210ENST00000481508 CRY2Q49AN0 593 aa13.51□□□□□ -0.25
SSBP1-210ENST00000481508 SLC10A5Q5PT55 438 aa13.51□□□□□ -0.25
SSBP1-210ENST00000481508 CHADLQ6NUI6 762 aa13.51□□□□□ -0.25
SSBP1-210ENST00000481508 DNAAF4Q8WXU2 420 aa13.51□□□□□ -0.25
SSBP1-210ENST00000481508 SH3TC1Q8TE82 1336 aa13.5□□□□□ -0.25
SSBP1-210ENST00000481508 RARSP54136 660 aaKnown RBP13.5□□□□□ -0.25
SSBP1-210ENST00000481508 DALRD3Q5D0E6 543 aaKnown RBP13.5□□□□□ -0.25
SSBP1-210ENST00000481508 STYK1Q6J9G0 422 aa13.5□□□□□ -0.25
SSBP1-210ENST00000481508 SMC4Q9NTJ3 1288 aa13.5□□□□□ -0.25
SSBP1-210ENST00000481508 RNF181Q9P0P0 153 aa13.5□□□□□ -0.25
SSBP1-210ENST00000481508 DICER1Q9UPY3 1922 aaKnown RBP13.5□□□□□ -0.25
SSBP1-210ENST00000481508 RNF123Q5XPI4 1314 aa13.49□□□□□ -0.25
SSBP1-210ENST00000481508 KDM2BQ8NHM5 1336 aa13.49□□□□□ -0.25
SSBP1-210ENST00000481508 ALDH1L2Q3SY69 923 aa13.49□□□□□ -0.25
SSBP1-210ENST00000481508 BEND3Q5T5X7 828 aa13.49□□□□□ -0.25
SSBP1-210ENST00000481508 CCDC191Q8NCU4 936 aa13.49□□□□□ -0.25
SSBP1-210ENST00000481508 MASTLQ96GX5 879 aa13.49□□□□□ -0.25
SSBP1-210ENST00000481508 CWC25Q9NXE8 425 aaPredicted RBP13.49□□□□□ -0.25
SSBP1-210ENST00000481508 SPDYE4A6NLX3 237 aa13.48□□□□□ -0.25
SSBP1-210ENST00000481508 BCAR3O75815 825 aa13.48□□□□□ -0.25
SSBP1-210ENST00000481508 PCCAP05165 728 aaPredicted RBP13.48□□□□□ -0.25
SSBP1-210ENST00000481508 CT47B1P0C2W7 299 aaPredicted RBP13.48□□□□□ -0.25
SSBP1-210ENST00000481508 NPR1P16066 1061 aa13.48□□□□□ -0.25
SSBP1-210ENST00000481508 PRPF40BQ6NWY9 871 aaKnown RBP13.48□□□□□ -0.25
SSBP1-210ENST00000481508 OLFM4Q6UX06 510 aa13.48□□□□□ -0.25
SSBP1-210ENST00000481508 TTLL6Q8N841 843 aa13.48□□□□□ -0.25
SSBP1-210ENST00000481508 ZBTB38Q8NAP3 1195 aaPredicted RBP13.48□□□□□ -0.25
SSBP1-210ENST00000481508 MKRN1Q9UHC7 482 aaKnown RBP13.48□□□□□ -0.25
SSBP1-210ENST00000481508 TNNQ9UQP3 1299 aa13.48□□□□□ -0.25
SSBP1-210ENST00000481508 LRRC37AA6NMS7 1700 aa13.47□□□□□ -0.25
SSBP1-210ENST00000481508 IRS4O14654 1257 aaPredicted RBP13.47□□□□□ -0.25
SSBP1-210ENST00000481508 CASP7P55210 303 aa13.47□□□□□ -0.25
SSBP1-210ENST00000481508 GCKRQ14397 625 aa13.47□□□□□ -0.25
SSBP1-210ENST00000481508 NOB1Q9ULX3 412 aaKnown RBP13.47□□□□□ -0.25
SSBP1-210ENST00000481508 SNED1Q8TER0 1413 aa13.47□□□□□ -0.25
SSBP1-210ENST00000481508 H7C1W4 665 aa13.46□□□□□ -0.25
SSBP1-210ENST00000481508 C21orf2O43822 256 aa13.46□□□□□ -0.25
SSBP1-210ENST00000481508 HOXA10P31260 410 aaPredicted RBP13.46□□□□□ -0.25
SSBP1-210ENST00000481508 RASSF7Q02833 373 aa13.46□□□□□ -0.25
SSBP1-210ENST00000481508 NEXNQ0ZGT2 675 aa13.46□□□□□ -0.25
SSBP1-210ENST00000481508 SLC4A10Q6U841 1118 aa13.46□□□□□ -0.25
SSBP1-210ENST00000481508 LINS1Q8NG48 757 aa13.46□□□□□ -0.25
SSBP1-210ENST00000481508 C7orf43Q8WVR3 580 aa13.46□□□□□ -0.25
SSBP1-210ENST00000481508 YTHDC1Q96MU7 727 aaKnown RBP13.46□□□□□ -0.25
SSBP1-210ENST00000481508 NLRP3Q96P20 1036 aa13.46□□□□□ -0.25
SSBP1-210ENST00000481508 PDZRN3Q9UPQ7 1066 aa13.46□□□□□ -0.25
SSBP1-210ENST00000481508 ABCC4O15439 1325 aa13.45□□□□□ -0.26
SSBP1-210ENST00000481508 PTPRCP08575 1304 aa13.45□□□□□ -0.26
SSBP1-210ENST00000481508 CDHR2Q9BYE9 1310 aa13.45□□□□□ -0.26
SSBP1-210ENST00000481508 BRPF1P55201 1214 aaPredicted RBP13.45□□□□□ -0.26
SSBP1-210ENST00000481508 UBE3BQ7Z3V4 1068 aa13.45□□□□□ -0.26
SSBP1-210ENST00000481508 CNKSR1Q969H4 720 aa13.45□□□□□ -0.26
SSBP1-210ENST00000481508 NFKBIEO00221 500 aa13.44□□□□□ -0.26
SSBP1-210ENST00000481508 RPGRQ92834 1020 aaKnown RBP13.44□□□□□ -0.26
SSBP1-210ENST00000481508 CCDC85AQ96PX6 553 aaPredicted RBP13.44□□□□□ -0.26
SSBP1-210ENST00000481508 A0A1B0GUL6 1792 aa13.43□□□□□ -0.26
SSBP1-210ENST00000481508 LTBP1Q14766 1721 aa13.43□□□□□ -0.26
SSBP1-210ENST00000481508 SF3B3Q15393 1217 aaKnown RBP13.43□□□□□ -0.26
SSBP1-210ENST00000481508 ABHD8Q96I13 439 aa13.43□□□□□ -0.26
SSBP1-210ENST00000481508 RBM17Q96I25 401 aaKnown RBP13.43□□□□□ -0.26
SSBP1-210ENST00000481508 CRAMP1Q96RY5 1269 aa13.43□□□□□ -0.26
SSBP1-210ENST00000481508 SEC31BQ9NQW1 1179 aa13.43□□□□□ -0.26
SSBP1-210ENST00000481508 DUOX1Q9NRD9 1551 aa13.42□□□□□ -0.26
SSBP1-210ENST00000481508 PDE8AO60658 829 aa13.42□□□□□ -0.26
SSBP1-210ENST00000481508 EPHA10Q5JZY3 1008 aa13.42□□□□□ -0.26
SSBP1-210ENST00000481508 CELF1Q92879 486 aaKnown RBP13.42□□□□□ -0.26
SSBP1-210ENST00000481508 SRCIN1Q9C0H9 1055 aa13.42□□□□□ -0.26
SSBP1-210ENST00000481508 COL4A5P29400 1685 aa13.41□□□□□ -0.26
SSBP1-210ENST00000481508 PPEF1O14829 653 aaPredicted RBP13.41□□□□□ -0.26
SSBP1-210ENST00000481508 ALDH1L1O75891 902 aa13.41□□□□□ -0.26
SSBP1-210ENST00000481508 CTSWP56202 376 aa13.41□□□□□ -0.26
SSBP1-210ENST00000481508 GRAPQ13588 217 aa13.41□□□□□ -0.26
SSBP1-210ENST00000481508 GRAPLQ8TC17 118 aaPredicted RBP13.41□□□□□ -0.26
SSBP1-210ENST00000481508 KAZALD1Q96I82 304 aa13.41□□□□□ -0.26
SSBP1-210ENST00000481508 GRM8O00222 908 aa13.4□□□□□ -0.26
SSBP1-210ENST00000481508 NBPF7P0C2Y1 421 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms