RNA–Protein interactions for RNA: ENST00000480615.1

SNRNP200-204, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 5

Gene SNRNP200, Length 1,646 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-204ENST00000480615 KLRG2A4D1S0 409 aaPredicted RBP16.95■□□□□ 0.3
SNRNP200-204ENST00000480615 UBTFL1P0CB47 393 aaPredicted RBP16.95■□□□□ 0.3
SNRNP200-204ENST00000480615 HSP90B1P14625 803 aaKnown RBP16.95■□□□□ 0.3
SNRNP200-204ENST00000480615 NPR1P16066 1061 aa16.95■□□□□ 0.3
SNRNP200-204ENST00000480615 COG6Q9Y2V7 657 aa16.95■□□□□ 0.3
SNRNP200-204ENST00000480615 GPR162Q16538 588 aa16.94■□□□□ 0.3
SNRNP200-204ENST00000480615 DALRD3Q5D0E6 543 aaKnown RBP16.94■□□□□ 0.3
SNRNP200-204ENST00000480615 EPHA10Q5JZY3 1008 aa16.94■□□□□ 0.3
SNRNP200-204ENST00000480615 RBM17Q96I25 401 aaKnown RBP16.94■□□□□ 0.3
SNRNP200-204ENST00000480615 SLX4Q8IY92 1834 aa16.94■□□□□ 0.3
SNRNP200-204ENST00000480615 MS4A1P11836 297 aa16.93■□□□□ 0.3
SNRNP200-204ENST00000480615 CCDC152Q4G0S7 254 aa16.93■□□□□ 0.3
SNRNP200-204ENST00000480615 STYK1Q6J9G0 422 aa16.93■□□□□ 0.3
SNRNP200-204ENST00000480615 DDX46Q7L014 1031 aaKnown RBP16.93■□□□□ 0.3
SNRNP200-204ENST00000480615 TTLL6Q8N841 843 aa16.93■□□□□ 0.3
SNRNP200-204ENST00000480615 SEC31BQ9NQW1 1179 aa16.93■□□□□ 0.3
SNRNP200-204ENST00000480615 PDZRN3Q9UPQ7 1066 aa16.93■□□□□ 0.3
SNRNP200-204ENST00000480615 UTYO14607 1347 aa16.93■□□□□ 0.3
SNRNP200-204ENST00000480615 COL4A1P02462 1669 aa16.93■□□□□ 0.3
SNRNP200-204ENST00000480615 YBX3P16989 372 aaKnown RBP eCLIP16.92■□□□□ 0.34e-8■■□□□ 11.6
SNRNP200-204ENST00000480615 FOXO4P98177 505 aa16.92■□□□□ 0.3
SNRNP200-204ENST00000480615 PRPF40BQ6NWY9 871 aaKnown RBP16.92■□□□□ 0.3
SNRNP200-204ENST00000480615 LMBR1LQ6UX01 489 aa16.92■□□□□ 0.3
SNRNP200-204ENST00000480615 SLC51AQ86UW1 340 aa16.92■□□□□ 0.3
SNRNP200-204ENST00000480615 TTLL11Q8NHH1 800 aa16.92■□□□□ 0.3
SNRNP200-204ENST00000480615 KAZALD1Q96I82 304 aa16.92■□□□□ 0.3
SNRNP200-204ENST00000480615 BICC1Q9H694 974 aaKnown RBP16.92■□□□□ 0.3
SNRNP200-204ENST00000480615 GREM2Q9H772 168 aa16.92■□□□□ 0.3
SNRNP200-204ENST00000480615 SPEF2Q9C093 1822 aa16.92■□□□□ 0.3
SNRNP200-204ENST00000480615 SF3B3Q15393 1217 aaKnown RBP16.92■□□□□ 0.3
SNRNP200-204ENST00000480615 FAM161AQ3B820 660 aa16.92■□□□□ 0.3
SNRNP200-204ENST00000480615 CNKSR1Q969H4 720 aa16.92■□□□□ 0.3
SNRNP200-204ENST00000480615 LRRFIP2Q9Y608 721 aaKnown RBP16.92■□□□□ 0.3
SNRNP200-204ENST00000480615 OLFM4Q6UX06 510 aa16.91■□□□□ 0.3
SNRNP200-204ENST00000480615 PLA2G12BQ9BX93 195 aa16.91■□□□□ 0.3
SNRNP200-204ENST00000480615 C1orf115Q9H7X2 142 aa16.91■□□□□ 0.3
SNRNP200-204ENST00000480615 C21orf2O43822 256 aa16.9■□□□□ 0.3
SNRNP200-204ENST00000480615 GNAI3P08754 354 aa16.9■□□□□ 0.3
SNRNP200-204ENST00000480615 ALDH1B1P30837 517 aa16.9■□□□□ 0.3
SNRNP200-204ENST00000480615 HOXA10P31260 410 aaPredicted RBP16.9■□□□□ 0.3
SNRNP200-204ENST00000480615 MVPQ14764 893 aaKnown RBP16.9■□□□□ 0.3
SNRNP200-204ENST00000480615 CELF1Q92879 486 aaKnown RBP16.9■□□□□ 0.3
SNRNP200-204ENST00000480615 ITGA6P23229 1130 aa16.89■□□□□ 0.29
SNRNP200-204ENST00000480615 PDE3AQ14432 1141 aa16.89■□□□□ 0.29
SNRNP200-204ENST00000480615 PPEF1O14829 653 aaPredicted RBP16.88■□□□□ 0.29
SNRNP200-204ENST00000480615 GRAPQ13588 217 aa16.88■□□□□ 0.29
SNRNP200-204ENST00000480615 ANKRD44Q8N8A2 993 aa16.88■□□□□ 0.29
SNRNP200-204ENST00000480615 GRAPLQ8TC17 118 aaPredicted RBP16.88■□□□□ 0.29
SNRNP200-204ENST00000480615 CRAMP1Q96RY5 1269 aa16.88■□□□□ 0.29
SNRNP200-204ENST00000480615 ARFGEF1Q9Y6D6 1849 aa16.88■□□□□ 0.29
SNRNP200-204ENST00000480615 ZBTB7BO15156 539 aaPredicted RBP16.88■□□□□ 0.29
SNRNP200-204ENST00000480615 CSF1RP07333 972 aa16.88■□□□□ 0.29
SNRNP200-204ENST00000480615 GNAI2P04899 355 aa16.87■□□□□ 0.29
SNRNP200-204ENST00000480615 IRX6P78412 446 aaPredicted RBP16.87■□□□□ 0.29
SNRNP200-204ENST00000480615 IFIT5Q13325 482 aaKnown RBP16.87■□□□□ 0.29
SNRNP200-204ENST00000480615 DDX19BQ9UMR2 479 aa16.87■□□□□ 0.29
SNRNP200-204ENST00000480615 ANKRD18BA2A2Z9 1011 aa16.86■□□□□ 0.29
SNRNP200-204ENST00000480615 DCAF8L1A6NGE4 600 aa16.86■□□□□ 0.29
SNRNP200-204ENST00000480615 RPS8P62241 208 aaKnown RBP16.86■□□□□ 0.29
SNRNP200-204ENST00000480615 CCDC57Q2TAC2 916 aa16.86■□□□□ 0.29
SNRNP200-204ENST00000480615 TAF7LQ5H9L4 462 aa16.86■□□□□ 0.29
SNRNP200-204ENST00000480615 ANKRD18AQ8IVF6 992 aa16.86■□□□□ 0.29
SNRNP200-204ENST00000480615 ZNF594Q96JF6 807 aaPredicted RBP16.86■□□□□ 0.29
SNRNP200-204ENST00000480615 ARHGAP27Q6ZUM4 889 aa16.85■□□□□ 0.29
SNRNP200-204ENST00000480615 KLHDC4Q8TBB5 520 aa16.85■□□□□ 0.29
SNRNP200-204ENST00000480615 CDC5LQ99459 802 aaKnown RBP16.85■□□□□ 0.29
SNRNP200-204ENST00000480615 BBOX1O75936 387 aa16.85■□□□□ 0.29
SNRNP200-204ENST00000480615 RABL6Q3YEC7 729 aaPredicted RBP16.85■□□□□ 0.29
SNRNP200-204ENST00000480615 CRBNQ96SW2 442 aa16.85■□□□□ 0.29
SNRNP200-204ENST00000480615 HDAC5Q9UQL6 1122 aa16.85■□□□□ 0.29
SNRNP200-204ENST00000480615 RTL9Q8NET4 1388 aa16.84■□□□□ 0.29
SNRNP200-204ENST00000480615 IGHMBP2P38935 993 aaKnown RBP16.83■□□□□ 0.28
SNRNP200-204ENST00000480615 C7orf43Q8WVR3 580 aa16.83■□□□□ 0.28
SNRNP200-204ENST00000480615 MPHOSPH8Q99549 860 aa16.83■□□□□ 0.28
SNRNP200-204ENST00000480615 TMX4Q9H1E5 349 aaPredicted RBP16.83■□□□□ 0.28
SNRNP200-204ENST00000480615 ATP6V0A2Q9Y487 856 aa16.83■□□□□ 0.28
SNRNP200-204ENST00000480615 SRGAP3O43295 1099 aa16.82■□□□□ 0.28
SNRNP200-204ENST00000480615 RASSF7Q02833 373 aa16.81■□□□□ 0.28
SNRNP200-204ENST00000480615 CCDC93Q567U6 631 aa16.81■□□□□ 0.28
SNRNP200-204ENST00000480615 SIL1Q9H173 461 aa16.81■□□□□ 0.28
SNRNP200-204ENST00000480615 ZBTB40Q9NUA8 1239 aa16.81■□□□□ 0.28
SNRNP200-204ENST00000480615 PNMA6EA0A0J9YXQ4 647 aa16.81■□□□□ 0.28
SNRNP200-204ENST00000480615 GRIN3BO60391 1043 aa16.81■□□□□ 0.28
SNRNP200-204ENST00000480615 LDHAL6AQ6ZMR3 332 aa16.81■□□□□ 0.28
SNRNP200-204ENST00000480615 SP8Q8IXZ3 490 aa16.81■□□□□ 0.28
SNRNP200-204ENST00000480615 CNNM1Q9NRU3 951 aa16.81■□□□□ 0.28
SNRNP200-204ENST00000480615 FER1L6Q2WGJ9 1857 aa16.8■□□□□ 0.28
SNRNP200-204ENST00000480615 LRRC37AA6NMS7 1700 aa16.8■□□□□ 0.28
SNRNP200-204ENST00000480615 SOGA3Q5TF21 947 aa16.8■□□□□ 0.28
SNRNP200-204ENST00000480615 PUS3Q9BZE2 481 aaKnown RBP16.8■□□□□ 0.28
SNRNP200-204ENST00000480615 BSDC1Q9NW68 430 aaPredicted RBP16.8■□□□□ 0.28
SNRNP200-204ENST00000480615 ANKIB1Q9P2G1 1089 aa16.8■□□□□ 0.28
SNRNP200-204ENST00000480615 NSFL1CQ9UNZ2 370 aaKnown RBP16.8■□□□□ 0.28
SNRNP200-204ENST00000480615 PA2G4Q9UQ80 394 aaKnown RBP16.8■□□□□ 0.28
SNRNP200-204ENST00000480615 GPSM2P81274 684 aa16.79■□□□□ 0.28
SNRNP200-204ENST00000480615 DPP8Q6V1X1 898 aaPredicted RBP16.79■□□□□ 0.28
SNRNP200-204ENST00000480615 TMC4Q7Z404 712 aa16.79■□□□□ 0.28
SNRNP200-204ENST00000480615 HELBQ8NG08 1087 aaPredicted RBP16.79■□□□□ 0.28
SNRNP200-204ENST00000480615 CHMP4BQ9H444 224 aaKnown RBP16.79■□□□□ 0.28
SNRNP200-204ENST00000480615 CCDC88AQ3V6T2 1871 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms