RNA–Protein interactions for RNA: ENST00000480393.5

TNFRSF25-213, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 1,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-213ENST00000480393 SNX21Q969T3 373 aa33.82■■■■□ 3
TNFRSF25-213ENST00000480393 MCCP23508 829 aa33.82■■■■□ 3
TNFRSF25-213ENST00000480393 UTP14AQ9BVJ6 771 aaKnown RBP33.82■■■■□ 3
TNFRSF25-213ENST00000480393 BOLA2Q9H3K6 86 aa33.82■■■■□ 3
TNFRSF25-213ENST00000480393 CCNL1Q9UK58 526 aaPredicted RBP33.82■■■■□ 3
TNFRSF25-213ENST00000480393 BCORQ6W2J9 1755 aa33.81■■■■□ 3
TNFRSF25-213ENST00000480393 TTLL11Q8NHH1 800 aa33.81■■■■□ 3
TNFRSF25-213ENST00000480393 RABEP1Q15276 862 aa33.8■■■■□ 3
TNFRSF25-213ENST00000480393 SUSD4Q5VX71 490 aa33.8■■■■□ 3
TNFRSF25-213ENST00000480393 DBNDD2Q9BQY9 259 aa33.8■■■■□ 3
TNFRSF25-213ENST00000480393 NIP7Q9Y221 180 aaKnown RBP eCLIP33.8■■■■□ 3
TNFRSF25-213ENST00000480393 SH3TC1Q8TE82 1336 aa33.8■■■■□ 3
TNFRSF25-213ENST00000480393 MYH3P11055 1940 aa33.79■■■■□ 3
TNFRSF25-213ENST00000480393 ATP5JP18859 108 aa33.79■■■■□ 3
TNFRSF25-213ENST00000480393 RUFY2Q8WXA3 655 aa33.79■■■■□ 3
TNFRSF25-213ENST00000480393 AK7Q96M32 723 aa33.79■■■■□ 3
TNFRSF25-213ENST00000480393 PUS3Q9BZE2 481 aaKnown RBP33.79■■■■□ 3
TNFRSF25-213ENST00000480393 ZNF609O15014 1411 aa33.79■■■■□ 3
TNFRSF25-213ENST00000480393 ANKRD18BA2A2Z9 1011 aa33.79■■■■□ 3
TNFRSF25-213ENST00000480393 RC3H1Q5TC82 1133 aaKnown RBP33.79■■■■□ 3
TNFRSF25-213ENST00000480393 CEP126Q9P2H0 1117 aa33.79■■■■□ 3
TNFRSF25-213ENST00000480393 SBF2Q86WG5 1849 aa33.78■■■■□ 3
TNFRSF25-213ENST00000480393 FAM177BA6PVY3 158 aa33.78■■■■□ 3
TNFRSF25-213ENST00000480393 ITGA6P23229 1130 aa33.78■■■■□ 3
TNFRSF25-213ENST00000480393 NEUROD6Q96NK8 337 aa33.78■■■■□ 3
TNFRSF25-213ENST00000480393 GREM2Q9H772 168 aa33.78■■■■□ 3
TNFRSF25-213ENST00000480393 HIP1O00291 1037 aa33.77■■■■□ 3
TNFRSF25-213ENST00000480393 SGSM2O43147 1006 aa33.77■■■■□ 3
TNFRSF25-213ENST00000480393 EPB41L2O43491 1005 aaKnown RBP33.76■■■□□ 2.99
TNFRSF25-213ENST00000480393 CWC27Q6UX04 472 aaKnown RBP33.76■■■□□ 2.99
TNFRSF25-213ENST00000480393 CLEC4GQ6UXB4 293 aa33.76■■■□□ 2.99
TNFRSF25-213ENST00000480393 HSP90B1P14625 803 aaKnown RBP33.75■■■□□ 2.99
TNFRSF25-213ENST00000480393 FSD1Q9BTV5 496 aa33.75■■■□□ 2.99
TNFRSF25-213ENST00000480393 AKAP2Q9Y2D5 859 aa33.74■■■□□ 2.99
TNFRSF25-213ENST00000480393 LY75O60449 1722 aa33.74■■■□□ 2.99
TNFRSF25-213ENST00000480393 RPS6KA4O75676 772 aa33.73■■■□□ 2.99
TNFRSF25-213ENST00000480393 KIAA1211Q6ZU35 1233 aa33.73■■■□□ 2.99
TNFRSF25-213ENST00000480393 BCL11BQ9C0K0 894 aaPredicted RBP33.73■■■□□ 2.99
TNFRSF25-213ENST00000480393 IL25Q9H293 177 aa33.73■■■□□ 2.99
TNFRSF25-213ENST00000480393 SCN7AQ01118 1682 aa33.72■■■□□ 2.99
TNFRSF25-213ENST00000480393 GNPATO15228 680 aa33.72■■■□□ 2.99
TNFRSF25-213ENST00000480393 SLKQ9H2G2 1235 aaPredicted RBP33.72■■■□□ 2.99
TNFRSF25-213ENST00000480393 NTSR2O95665 410 aa33.71■■■□□ 2.99
TNFRSF25-213ENST00000480393 LDHAL6AQ6ZMR3 332 aa33.71■■■□□ 2.99
TNFRSF25-213ENST00000480393 A0A1B0GUL7 405 aa33.7■■■□□ 2.99
TNFRSF25-213ENST00000480393 RGL2O15211 777 aa33.7■■■□□ 2.99
TNFRSF25-213ENST00000480393 HCLS1P14317 486 aaPredicted RBP33.7■■■□□ 2.99
TNFRSF25-213ENST00000480393 TIMM10P62072 90 aa33.7■■■□□ 2.99
TNFRSF25-213ENST00000480393 DNAJC2Q99543 621 aaKnown RBP33.7■■■□□ 2.98
TNFRSF25-213ENST00000480393 CNNM1Q9NRU3 951 aa33.7■■■□□ 2.98
TNFRSF25-213ENST00000480393 METTL24Q5JXM2 366 aa33.69■■■□□ 2.98
TNFRSF25-213ENST00000480393 HAUS7Q99871 368 aa33.69■■■□□ 2.98
TNFRSF25-213ENST00000480393 SPRYD3Q8NCJ5 442 aa33.68■■■□□ 2.98
TNFRSF25-213ENST00000480393 RTCBQ9Y3I0 505 aaKnown RBP33.68■■■□□ 2.98
TNFRSF25-213ENST00000480393 RIC1Q4ADV7 1423 aa33.68■■■□□ 2.98
TNFRSF25-213ENST00000480393 RAD50Q92878 1312 aa33.68■■■□□ 2.98
TNFRSF25-213ENST00000480393 LAMB2P55268 1798 aa33.68■■■□□ 2.98
TNFRSF25-213ENST00000480393 KRT27Q7Z3Y8 459 aa33.67■■■□□ 2.98
TNFRSF25-213ENST00000480393 ANAPC15P60006 121 aa33.67■■■□□ 2.98
TNFRSF25-213ENST00000480393 FAM196AQ6ZSG2 479 aa33.67■■■□□ 2.98
TNFRSF25-213ENST00000480393 NARFQ9UHQ1 456 aa33.67■■■□□ 2.98
TNFRSF25-213ENST00000480393 K7ELQ4 463 aaPredicted RBP33.66■■■□□ 2.98
TNFRSF25-213ENST00000480393 DDX60Q8IY21 1712 aaKnown RBP33.65■■■□□ 2.98
TNFRSF25-213ENST00000480393 ST18O60284 1047 aa33.65■■■□□ 2.98
TNFRSF25-213ENST00000480393 CD2BP2O95400 341 aaKnown RBP33.65■■■□□ 2.98
TNFRSF25-213ENST00000480393 NMIQ13287 307 aaPredicted RBP33.65■■■□□ 2.98
TNFRSF25-213ENST00000480393 NBR1Q14596 966 aa33.65■■■□□ 2.98
TNFRSF25-213ENST00000480393 GORABQ5T7V8 394 aa33.65■■■□□ 2.98
TNFRSF25-213ENST00000480393 LSG1Q9H089 658 aaKnown RBP33.65■■■□□ 2.98
TNFRSF25-213ENST00000480393 RIPOR2Q9Y4F9 1068 aa33.65■■■□□ 2.98
TNFRSF25-213ENST00000480393 TAF1LQ8IZX4 1826 aa33.65■■■□□ 2.98
TNFRSF25-213ENST00000480393 RFX7Q2KHR2 1363 aa33.65■■■□□ 2.98
TNFRSF25-213ENST00000480393 LRP5O75197 1615 aa33.65■■■□□ 2.98
TNFRSF25-213ENST00000480393 ZPR1O75312 459 aa33.65■■■□□ 2.98
TNFRSF25-213ENST00000480393 CCDC152Q4G0S7 254 aa33.65■■■□□ 2.98
TNFRSF25-213ENST00000480393 USPL1Q5W0Q7 1092 aa33.64■■■□□ 2.98
TNFRSF25-213ENST00000480393 EDC3Q96F86 508 aaKnown RBP33.64■■■□□ 2.98
TNFRSF25-213ENST00000480393 C4BP0C0L5 1744 aa33.63■■■□□ 2.97
TNFRSF25-213ENST00000480393 SMIM5Q71RC9 77 aa33.63■■■□□ 2.97
TNFRSF25-213ENST00000480393 ATP2B3Q16720 1220 aa33.62■■■□□ 2.97
TNFRSF25-213ENST00000480393 CCDC158Q5M9N0 1113 aa33.62■■■□□ 2.97
TNFRSF25-213ENST00000480393 BRWD3Q6RI45 1802 aa33.62■■■□□ 2.97
TNFRSF25-213ENST00000480393 HSPA4P34932 840 aa33.62■■■□□ 2.97
TNFRSF25-213ENST00000480393 ZNF772Q68DY9 489 aaPredicted RBP33.62■■■□□ 2.97
TNFRSF25-213ENST00000480393 BICDL1Q6ZP65 573 aa33.62■■■□□ 2.97
TNFRSF25-213ENST00000480393 FAM227BQ96M60 508 aa33.62■■■□□ 2.97
TNFRSF25-213ENST00000480393 PALD1Q9ULE6 856 aa33.62■■■□□ 2.97
TNFRSF25-213ENST00000480393 NDUFB9Q9Y6M9 179 aa33.62■■■□□ 2.97
TNFRSF25-213ENST00000480393 TTC39AQ5SRH9 613 aa33.61■■■□□ 2.97
TNFRSF25-213ENST00000480393 XAGE2Q96GT9 111 aa33.61■■■□□ 2.97
TNFRSF25-213ENST00000480393 SRP68Q9UHB9 627 aaKnown RBP33.61■■■□□ 2.97
TNFRSF25-213ENST00000480393 HSP90AA1P07900 732 aaKnown RBP33.6■■■□□ 2.97
TNFRSF25-213ENST00000480393 IFIT1P09914 478 aaKnown RBP33.6■■■□□ 2.97
TNFRSF25-213ENST00000480393 ANTXR1Q9H6X2 564 aa33.6■■■□□ 2.97
TNFRSF25-213ENST00000480393 RTL9Q8NET4 1388 aa33.6■■■□□ 2.97
TNFRSF25-213ENST00000480393 TBC1D9BQ66K14 1250 aa33.59■■■□□ 2.97
TNFRSF25-213ENST00000480393 PPIL4Q8WUA2 492 aaKnown RBP eCLIP33.59■■■□□ 2.97
TNFRSF25-213ENST00000480393 BCL2L12Q9HB09 334 aa33.59■■■□□ 2.97
TNFRSF25-213ENST00000480393 PAG1Q9NWQ8 432 aa33.59■■■□□ 2.97
TNFRSF25-213ENST00000480393 ADORA1P30542 326 aa33.59■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms