RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 RTL9Q8NET4 1388 aa13.44□□□□□ -0.26
VTI1A-204ENST00000480057 LRP5O75197 1615 aa13.43□□□□□ -0.26
VTI1A-204ENST00000480057 HIP1O00291 1037 aa13.43□□□□□ -0.26
VTI1A-204ENST00000480057 TFCP2Q12800 502 aa13.43□□□□□ -0.26
VTI1A-204ENST00000480057 TSHZ3Q63HK5 1081 aa13.43□□□□□ -0.26
VTI1A-204ENST00000480057 KRT27Q7Z3Y8 459 aa13.43□□□□□ -0.26
VTI1A-204ENST00000480057 IL27Q8NEV9 243 aa13.43□□□□□ -0.26
VTI1A-204ENST00000480057 TTLL11Q8NHH1 800 aa13.43□□□□□ -0.26
VTI1A-204ENST00000480057 RILPL2Q969X0 211 aa13.43□□□□□ -0.26
VTI1A-204ENST00000480057 EVI5LQ96CN4 794 aa13.43□□□□□ -0.26
VTI1A-204ENST00000480057 ESYT1Q9BSJ8 1104 aa13.43□□□□□ -0.26
VTI1A-204ENST00000480057 BCL11AQ9H165 835 aa13.43□□□□□ -0.26
VTI1A-204ENST00000480057 BRWD3Q6RI45 1802 aa13.43□□□□□ -0.26
VTI1A-204ENST00000480057 RFX7Q2KHR2 1363 aa13.43□□□□□ -0.26
VTI1A-204ENST00000480057 C4BP0C0L5 1744 aa13.42□□□□□ -0.26
VTI1A-204ENST00000480057 ANKRD18BA2A2Z9 1011 aa13.42□□□□□ -0.26
VTI1A-204ENST00000480057 ATP5JP18859 108 aa13.42□□□□□ -0.26
VTI1A-204ENST00000480057 RTL5Q5HYW3 569 aaPredicted RBP13.42□□□□□ -0.26
VTI1A-204ENST00000480057 SLC27A3Q5K4L6 730 aa13.42□□□□□ -0.26
VTI1A-204ENST00000480057 SUSD4Q5VX71 490 aa13.42□□□□□ -0.26
VTI1A-204ENST00000480057 ERICH6Q7L0X2 663 aa13.42□□□□□ -0.26
VTI1A-204ENST00000480057 PTF1AQ7RTS3 328 aa13.42□□□□□ -0.26
VTI1A-204ENST00000480057 USP26Q9BXU7 913 aa13.42□□□□□ -0.26
VTI1A-204ENST00000480057 NARFQ9UHQ1 456 aa13.42□□□□□ -0.26
VTI1A-204ENST00000480057 AKAP2Q9Y2D5 859 aa13.42□□□□□ -0.26
VTI1A-204ENST00000480057 ZNF609O15014 1411 aa13.41□□□□□ -0.26
VTI1A-204ENST00000480057 NTSR2O95665 410 aa13.41□□□□□ -0.26
VTI1A-204ENST00000480057 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.41□□□□□ -0.26
VTI1A-204ENST00000480057 SNX21Q969T3 373 aa13.41□□□□□ -0.26
VTI1A-204ENST00000480057 CCDC8Q9H0W5 538 aaPredicted RBP13.41□□□□□ -0.26
VTI1A-204ENST00000480057 RTCBQ9Y3I0 505 aaKnown RBP13.41□□□□□ -0.26
VTI1A-204ENST00000480057 COL24A1Q17RW2 1714 aa13.41□□□□□ -0.26
VTI1A-204ENST00000480057 DDX60Q8IY21 1712 aaKnown RBP13.4□□□□□ -0.26
VTI1A-204ENST00000480057 TAF7LQ5H9L4 462 aa13.4□□□□□ -0.26
VTI1A-204ENST00000480057 RUFY2Q8WXA3 655 aa13.4□□□□□ -0.26
VTI1A-204ENST00000480057 CEP126Q9P2H0 1117 aa13.4□□□□□ -0.26
VTI1A-204ENST00000480057 DBNLQ9UJU6 430 aaKnown RBP13.4□□□□□ -0.26
VTI1A-204ENST00000480057 NIP7Q9Y221 180 aaKnown RBP eCLIP13.4□□□□□ -0.26
VTI1A-204ENST00000480057 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.4□□□□□ -0.26
VTI1A-204ENST00000480057 ABCC12Q96J65 1359 aa13.4□□□□□ -0.26
VTI1A-204ENST00000480057 SPEF2Q9C093 1822 aa13.39□□□□□ -0.27
VTI1A-204ENST00000480057 ITGA6P23229 1130 aa13.39□□□□□ -0.27
VTI1A-204ENST00000480057 MCCP23508 829 aa13.39□□□□□ -0.27
VTI1A-204ENST00000480057 IL17RAQ96F46 866 aa13.39□□□□□ -0.27
VTI1A-204ENST00000480057 TLR7Q9NYK1 1049 aaKnown RBP13.39□□□□□ -0.27
VTI1A-204ENST00000480057 RAD50Q92878 1312 aa13.39□□□□□ -0.27
VTI1A-204ENST00000480057 GNPATO15228 680 aa13.38□□□□□ -0.27
VTI1A-204ENST00000480057 SGSM2O43147 1006 aa13.38□□□□□ -0.27
VTI1A-204ENST00000480057 ANAPC15P60006 121 aa13.38□□□□□ -0.27
VTI1A-204ENST00000480057 RABEP1Q15276 862 aa13.38□□□□□ -0.27
VTI1A-204ENST00000480057 LRRC24Q50LG9 513 aa13.38□□□□□ -0.27
VTI1A-204ENST00000480057 SLC10A5Q5PT55 438 aa13.38□□□□□ -0.27
VTI1A-204ENST00000480057 FAM182BQ5T319 152 aa13.38□□□□□ -0.27
VTI1A-204ENST00000480057 KIF2CQ99661 725 aa13.38□□□□□ -0.27
VTI1A-204ENST00000480057 NYXQ9GZU5 481 aa13.38□□□□□ -0.27
VTI1A-204ENST00000480057 GREM2Q9H772 168 aa13.38□□□□□ -0.27
VTI1A-204ENST00000480057 SNRKQ9NRH2 765 aa13.38□□□□□ -0.27
VTI1A-204ENST00000480057 RIPOR2Q9Y4F9 1068 aa13.38□□□□□ -0.27
VTI1A-204ENST00000480057 C4AP0C0L4 1744 aa13.37□□□□□ -0.27
VTI1A-204ENST00000480057 ZPR1O75312 459 aa13.37□□□□□ -0.27
VTI1A-204ENST00000480057 CCDC152Q4G0S7 254 aa13.37□□□□□ -0.27
VTI1A-204ENST00000480057 SYNE4Q8N205 404 aa13.37□□□□□ -0.27
VTI1A-204ENST00000480057 ZNF594Q96JF6 807 aaPredicted RBP13.37□□□□□ -0.27
VTI1A-204ENST00000480057 HAUS7Q99871 368 aa13.37□□□□□ -0.27
VTI1A-204ENST00000480057 DBNDD2Q9BQY9 259 aa13.37□□□□□ -0.27
VTI1A-204ENST00000480057 DIAPH3Q9NSV4 1193 aa13.37□□□□□ -0.27
VTI1A-204ENST00000480057 RIC1Q4ADV7 1423 aa13.37□□□□□ -0.27
VTI1A-204ENST00000480057 MROH5Q6ZUA9 1318 aa13.37□□□□□ -0.27
VTI1A-204ENST00000480057 SF3B3Q15393 1217 aaKnown RBP13.36□□□□□ -0.27
VTI1A-204ENST00000480057 LDHAL6AQ6ZMR3 332 aa13.36□□□□□ -0.27
VTI1A-204ENST00000480057 TBC1D2Q9BYX2 928 aa13.36□□□□□ -0.27
VTI1A-204ENST00000480057 PUS3Q9BZE2 481 aaKnown RBP13.36□□□□□ -0.27
VTI1A-204ENST00000480057 BCL2L12Q9HB09 334 aa13.36□□□□□ -0.27
VTI1A-204ENST00000480057 A0A1B0GUL7 405 aa13.35□□□□□ -0.27
VTI1A-204ENST00000480057 TRAPPC3LQ5T215 181 aa13.35□□□□□ -0.27
VTI1A-204ENST00000480057 USPL1Q5W0Q7 1092 aa13.35□□□□□ -0.27
VTI1A-204ENST00000480057 HSCBQ8IWL3 235 aa13.35□□□□□ -0.27
VTI1A-204ENST00000480057 ZNF512BQ96KM6 892 aaPredicted RBP13.35□□□□□ -0.27
VTI1A-204ENST00000480057 BOLA2Q9H3K6 86 aa13.35□□□□□ -0.27
VTI1A-204ENST00000480057 CNNM1Q9NRU3 951 aa13.35□□□□□ -0.27
VTI1A-204ENST00000480057 ARAP2Q8WZ64 1704 aa13.35□□□□□ -0.27
VTI1A-204ENST00000480057 UBR3Q6ZT12 1888 aa13.35□□□□□ -0.27
VTI1A-204ENST00000480057 RGPD3A6NKT7 1758 aaPredicted RBP13.35□□□□□ -0.27
VTI1A-204ENST00000480057 RGPD4Q7Z3J3 1758 aa13.35□□□□□ -0.27
VTI1A-204ENST00000480057 MAP4K4O95819 1239 aaPredicted RBP13.34□□□□□ -0.27
VTI1A-204ENST00000480057 SSFA2P28290 1259 aa13.34□□□□□ -0.27
VTI1A-204ENST00000480057 KCNQ4P56696 695 aa13.34□□□□□ -0.27
VTI1A-204ENST00000480057 METTL24Q5JXM2 366 aa13.34□□□□□ -0.27
VTI1A-204ENST00000480057 CCDC158Q5M9N0 1113 aa13.34□□□□□ -0.27
VTI1A-204ENST00000480057 KIAA1211Q6ZU35 1233 aa13.34□□□□□ -0.27
VTI1A-204ENST00000480057 ARHGEF1Q92888 912 aaKnown RBP13.34□□□□□ -0.27
VTI1A-204ENST00000480057 NEUROD6Q96NK8 337 aa13.34□□□□□ -0.27
VTI1A-204ENST00000480057 SETDB2Q96T68 719 aa13.34□□□□□ -0.27
VTI1A-204ENST00000480057 PLSCR1O15162 318 aa13.33□□□□□ -0.28
VTI1A-204ENST00000480057 PDE8BO95263 885 aa13.33□□□□□ -0.28
VTI1A-204ENST00000480057 HCLS1P14317 486 aaPredicted RBP13.33□□□□□ -0.28
VTI1A-204ENST00000480057 RXRBP28702 533 aa13.33□□□□□ -0.28
VTI1A-204ENST00000480057 RFC4P35249 363 aa13.33□□□□□ -0.28
VTI1A-204ENST00000480057 IGHMBP2P38935 993 aaKnown RBP13.33□□□□□ -0.28
VTI1A-204ENST00000480057 ATP2B3Q16720 1220 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms