RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 PTCD1O75127 700 aaKnown RBP22.86■■□□□ 1.25
TNFRSF8-204ENST00000479933 LRSAM1Q6UWE0 723 aa22.86■■□□□ 1.25
TNFRSF8-204ENST00000479933 TMEM87AQ8NBN3 555 aa22.86■■□□□ 1.25
TNFRSF8-204ENST00000479933 PDLIM2Q96JY6 352 aa22.86■■□□□ 1.25
TNFRSF8-204ENST00000479933 CARD10Q9BWT7 1032 aa22.86■■□□□ 1.25
TNFRSF8-204ENST00000479933 R3HCC1Q9Y3T6 440 aaKnown RBP22.86■■□□□ 1.25
TNFRSF8-204ENST00000479933 H7C1W4 665 aa22.85■■□□□ 1.25
TNFRSF8-204ENST00000479933 STX6O43752 255 aa22.85■■□□□ 1.25
TNFRSF8-204ENST00000479933 TFCP2Q12800 502 aa22.85■■□□□ 1.25
TNFRSF8-204ENST00000479933 ADCK5Q3MIX3 580 aa22.85■■□□□ 1.25
TNFRSF8-204ENST00000479933 TMEM63CQ9P1W3 806 aa22.85■■□□□ 1.25
TNFRSF8-204ENST00000479933 A0A0D9SFI3 127 aa22.85■■□□□ 1.25
TNFRSF8-204ENST00000479933 IL2RBP14784 551 aa22.85■■□□□ 1.25
TNFRSF8-204ENST00000479933 ANKRD1Q15327 319 aa22.85■■□□□ 1.25
TNFRSF8-204ENST00000479933 ALDH8A1Q9H2A2 487 aaPredicted RBP22.85■■□□□ 1.25
TNFRSF8-204ENST00000479933 DBNLQ9UJU6 430 aaKnown RBP22.85■■□□□ 1.25
TNFRSF8-204ENST00000479933 KCPQ6ZWJ8 1503 aa22.84■■□□□ 1.25
TNFRSF8-204ENST00000479933 ABCA3Q99758 1704 aa22.84■■□□□ 1.25
TNFRSF8-204ENST00000479933 NBPF26B4DH59 902 aa22.84■■□□□ 1.25
TNFRSF8-204ENST00000479933 SLC27A2O14975 620 aa22.84■■□□□ 1.25
TNFRSF8-204ENST00000479933 HSPA2P54652 639 aa22.84■■□□□ 1.25
TNFRSF8-204ENST00000479933 NBPF14Q5TI25 921 aa22.84■■□□□ 1.25
TNFRSF8-204ENST00000479933 NBPF10Q6P3W6 841 aaKnown RBP22.84■■□□□ 1.25
TNFRSF8-204ENST00000479933 TICAM2Q86XR7 235 aa22.84■■□□□ 1.25
TNFRSF8-204ENST00000479933 NBPF15Q8N660 670 aa22.84■■□□□ 1.25
TNFRSF8-204ENST00000479933 CHAMP1Q96JM3 812 aa22.84■■□□□ 1.25
TNFRSF8-204ENST00000479933 CWC25Q9NXE8 425 aaPredicted RBP22.84■■□□□ 1.25
TNFRSF8-204ENST00000479933 RBM27Q9P2N5 1060 aaKnown RBP22.84■■□□□ 1.25
TNFRSF8-204ENST00000479933 PHF14O94880 888 aa22.83■■□□□ 1.25
TNFRSF8-204ENST00000479933 SYT1P21579 422 aa22.83■■□□□ 1.25
TNFRSF8-204ENST00000479933 TSGA10IPQ3SY00 556 aa22.83■■□□□ 1.25
TNFRSF8-204ENST00000479933 SLAIN2Q9P270 581 aa22.83■■□□□ 1.25
TNFRSF8-204ENST00000479933 CPA1P15085 419 aa22.82■■□□□ 1.24
TNFRSF8-204ENST00000479933 JARID2Q92833 1246 aaPredicted RBP22.82■■□□□ 1.24
TNFRSF8-204ENST00000479933 CCDC94Q9BW85 323 aaPredicted RBP22.82■■□□□ 1.24
TNFRSF8-204ENST00000479933 PRIM1P49642 420 aaKnown RBP22.82■■□□□ 1.24
TNFRSF8-204ENST00000479933 LMBR1LQ6UX01 489 aa22.82■■□□□ 1.24
TNFRSF8-204ENST00000479933 GPR108Q9NPR9 543 aa22.82■■□□□ 1.24
TNFRSF8-204ENST00000479933 SHANK3Q9BYB0 1731 aa22.81■■□□□ 1.24
TNFRSF8-204ENST00000479933 FOXO4P98177 505 aa22.81■■□□□ 1.24
TNFRSF8-204ENST00000479933 KRT32Q14532 448 aa22.81■■□□□ 1.24
TNFRSF8-204ENST00000479933 CCDC191Q8NCU4 936 aa22.81■■□□□ 1.24
TNFRSF8-204ENST00000479933 HAUS7Q99871 368 aa22.81■■□□□ 1.24
TNFRSF8-204ENST00000479933 TNS2Q63HR2 1409 aa22.81■■□□□ 1.24
TNFRSF8-204ENST00000479933 F13A1P00488 732 aa22.81■■□□□ 1.24
TNFRSF8-204ENST00000479933 BLOC1S2Q6QNY1 142 aa22.81■■□□□ 1.24
TNFRSF8-204ENST00000479933 SASS6Q6UVJ0 657 aa22.81■■□□□ 1.24
TNFRSF8-204ENST00000479933 USP48Q86UV5 1035 aa22.81■■□□□ 1.24
TNFRSF8-204ENST00000479933 CCDC83Q8IWF9 413 aa22.81■■□□□ 1.24
TNFRSF8-204ENST00000479933 RBSNQ9H1K0 784 aa22.81■■□□□ 1.24
TNFRSF8-204ENST00000479933 NSFL1CQ9UNZ2 370 aaKnown RBP22.81■■□□□ 1.24
TNFRSF8-204ENST00000479933 TJP1Q07157 1748 aa22.8■■□□□ 1.24
TNFRSF8-204ENST00000479933 USPL1Q5W0Q7 1092 aa22.8■■□□□ 1.24
TNFRSF8-204ENST00000479933 TAF5LO75529 589 aa22.79■■□□□ 1.24
TNFRSF8-204ENST00000479933 LARGE1O95461 756 aa22.79■■□□□ 1.24
TNFRSF8-204ENST00000479933 GJB2P29033 226 aa22.79■■□□□ 1.24
TNFRSF8-204ENST00000479933 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.79■■□□□ 1.24
TNFRSF8-204ENST00000479933 SYCE3A1L190 88 aa22.79■■□□□ 1.24
TNFRSF8-204ENST00000479933 LARP6Q9BRS8 491 aaKnown RBP22.79■■□□□ 1.24
TNFRSF8-204ENST00000479933 ZKSCAN5Q9Y2L8 839 aa22.79■■□□□ 1.24
TNFRSF8-204ENST00000479933 TCHHQ07283 1943 aa22.79■■□□□ 1.24
TNFRSF8-204ENST00000479933 TTLL7Q6ZT98 887 aa22.78■■□□□ 1.24
TNFRSF8-204ENST00000479933 KLHL34Q8N239 644 aa22.78■■□□□ 1.24
TNFRSF8-204ENST00000479933 ATG3Q9NT62 314 aa22.78■■□□□ 1.24
TNFRSF8-204ENST00000479933 STRCQ7RTU9 1775 aa22.78■■□□□ 1.24
TNFRSF8-204ENST00000479933 RPS6KB1P23443 525 aa22.78■■□□□ 1.24
TNFRSF8-204ENST00000479933 IL15P40933 162 aaPredicted RBP22.78■■□□□ 1.24
TNFRSF8-204ENST00000479933 ME3Q16798 604 aa22.78■■□□□ 1.24
TNFRSF8-204ENST00000479933 DBNDD2Q9BQY9 259 aa22.78■■□□□ 1.24
TNFRSF8-204ENST00000479933 U3KPZ7 1027 aaPredicted RBP22.78■■□□□ 1.24
TNFRSF8-204ENST00000479933 A1BGP04217 495 aa22.76■■□□□ 1.23
TNFRSF8-204ENST00000479933 ZNF589Q86UQ0 364 aaPredicted RBP22.76■■□□□ 1.23
TNFRSF8-204ENST00000479933 CHMP3Q9Y3E7 222 aa22.76■■□□□ 1.23
TNFRSF8-204ENST00000479933 ZSCAN20P17040 1043 aaPredicted RBP22.76■■□□□ 1.23
TNFRSF8-204ENST00000479933 PDCP20941 246 aa22.76■■□□□ 1.23
TNFRSF8-204ENST00000479933 EVA1CP58658 441 aa22.76■■□□□ 1.23
TNFRSF8-204ENST00000479933 GTPBP4Q9BZE4 634 aaKnown RBP22.76■■□□□ 1.23
TNFRSF8-204ENST00000479933 TPCN1Q9ULQ1 816 aa22.76■■□□□ 1.23
TNFRSF8-204ENST00000479933 LETM1O95202 739 aaPredicted RBP22.75■■□□□ 1.23
TNFRSF8-204ENST00000479933 UBE2HP62256 183 aa22.75■■□□□ 1.23
TNFRSF8-204ENST00000479933 MCMDC2Q4G0Z9 681 aa22.75■■□□□ 1.23
TNFRSF8-204ENST00000479933 DDX54Q8TDD1 881 aaKnown RBP22.75■■□□□ 1.23
TNFRSF8-204ENST00000479933 DNAJC2Q99543 621 aaKnown RBP22.75■■□□□ 1.23
TNFRSF8-204ENST00000479933 CIAO1O76071 339 aa22.75■■□□□ 1.23
TNFRSF8-204ENST00000479933 ATG9AQ7Z3C6 839 aa22.75■■□□□ 1.23
TNFRSF8-204ENST00000479933 KBTBD3Q8NAB2 608 aa22.75■■□□□ 1.23
TNFRSF8-204ENST00000479933 TEX13AQ9BXU3 409 aaPredicted RBP22.75■■□□□ 1.23
TNFRSF8-204ENST00000479933 TSPY26PQ9H489 355 aa22.75■■□□□ 1.23
TNFRSF8-204ENST00000479933 MTMR6Q9Y217 621 aa22.75■■□□□ 1.23
TNFRSF8-204ENST00000479933 PALLDQ8WX93 1383 aa22.74■■□□□ 1.23
TNFRSF8-204ENST00000479933 SH3TC1Q8TE82 1336 aa22.74■■□□□ 1.23
TNFRSF8-204ENST00000479933 GADD45BO75293 160 aaPredicted RBP22.74■■□□□ 1.23
TNFRSF8-204ENST00000479933 KIF20AO95235 890 aa22.74■■□□□ 1.23
TNFRSF8-204ENST00000479933 FOXD4L6Q3SYB3 417 aaPredicted RBP22.74■■□□□ 1.23
TNFRSF8-204ENST00000479933 FOXD4L3Q6VB84 417 aaPredicted RBP22.74■■□□□ 1.23
TNFRSF8-204ENST00000479933 EDC3Q96F86 508 aaKnown RBP22.74■■□□□ 1.23
TNFRSF8-204ENST00000479933 CNPY2Q9Y2B0 182 aa22.74■■□□□ 1.23
TNFRSF8-204ENST00000479933 SPEF2Q9C093 1822 aa22.74■■□□□ 1.23
TNFRSF8-204ENST00000479933 GDPD2Q9HCC8 539 aa22.73■■□□□ 1.23
TNFRSF8-204ENST00000479933 ZNF609O15014 1411 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms