RNA–Protein interactions for RNA: ENST00000479791.1

LYSMD4-206, Transcript of LysM domain containing 4, humanhuman

TSL 5

Gene LYSMD4, Length 3,001 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-206ENST00000479791 NOL10Q9BSC4 688 aaKnown RBP15.26■□□□□ 0.03
LYSMD4-206ENST00000479791 TRMT1Q9NXH9 659 aaKnown RBP15.26■□□□□ 0.03
LYSMD4-206ENST00000479791 ZBTB22O15209 634 aa15.25■□□□□ 0.03
LYSMD4-206ENST00000479791 IFIT2P09913 472 aaKnown RBP15.25■□□□□ 0.03
LYSMD4-206ENST00000479791 CYP2C19P33261 490 aa15.25■□□□□ 0.03
LYSMD4-206ENST00000479791 HMG20BQ9P0W2 317 aa15.25■□□□□ 0.03
LYSMD4-206ENST00000479791 IMPACTQ9P2X3 320 aa15.25■□□□□ 0.03
LYSMD4-206ENST00000479791 NPHP4O75161 1426 aaPredicted RBP15.25■□□□□ 0.03
LYSMD4-206ENST00000479791 FILIP1Q7Z7B0 1213 aa15.25■□□□□ 0.03
LYSMD4-206ENST00000479791 OSBPL5Q9H0X9 879 aaPredicted RBP15.25■□□□□ 0.03
LYSMD4-206ENST00000479791 DHX40Q8IX18 779 aaKnown RBP15.25■□□□□ 0.03
LYSMD4-206ENST00000479791 DNAJC2Q99543 621 aaKnown RBP15.25■□□□□ 0.03
LYSMD4-206ENST00000479791 ANO10Q9NW15 660 aa15.25■□□□□ 0.03
LYSMD4-206ENST00000479791 KCNJ6P48051 423 aa15.24■□□□□ 0.03
LYSMD4-206ENST00000479791 NMIQ13287 307 aaPredicted RBP15.24■□□□□ 0.03
LYSMD4-206ENST00000479791 IL17REQ8NFR9 667 aa15.24■□□□□ 0.03
LYSMD4-206ENST00000479791 DNAAF4Q8WXU2 420 aa15.24■□□□□ 0.03
LYSMD4-206ENST00000479791 FAM227BQ96M60 508 aa15.24■□□□□ 0.03
LYSMD4-206ENST00000479791 SNW1Q13573 536 aaKnown RBP15.24■□□□□ 0.03
LYSMD4-206ENST00000479791 COL9A3Q14050 684 aaPredicted RBP15.24■□□□□ 0.03
LYSMD4-206ENST00000479791 CCDC93Q567U6 631 aa15.24■□□□□ 0.03
LYSMD4-206ENST00000479791 CHMP4AQ9BY43 222 aa15.24■□□□□ 0.03
LYSMD4-206ENST00000479791 TOPAZ1Q8N9V7 1692 aa15.24■□□□□ 0.03
LYSMD4-206ENST00000479791 ERICH4A6NGS2 130 aa15.23■□□□□ 0.03
LYSMD4-206ENST00000479791 DHX8Q14562 1220 aaKnown RBP15.23■□□□□ 0.03
LYSMD4-206ENST00000479791 GTF3C6Q969F1 213 aa15.23■□□□□ 0.03
LYSMD4-206ENST00000479791 BCL11BQ9C0K0 894 aaPredicted RBP15.23■□□□□ 0.03
LYSMD4-206ENST00000479791 FHOD1Q9Y613 1164 aa15.23■□□□□ 0.03
LYSMD4-206ENST00000479791 PSDA5PKW4 1024 aaPredicted RBP15.23■□□□□ 0.03
LYSMD4-206ENST00000479791 BRF1Q92994 677 aa15.23■□□□□ 0.03
LYSMD4-206ENST00000479791 ST7Q9NRC1 585 aa15.23■□□□□ 0.03
LYSMD4-206ENST00000479791 TSPYL1Q9H0U9 437 aa15.22■□□□□ 0.03
LYSMD4-206ENST00000479791 RCOR1Q9UKL0 485 aa15.22■□□□□ 0.03
LYSMD4-206ENST00000479791 JCADQ9P266 1359 aa15.22■□□□□ 0.03
LYSMD4-206ENST00000479791 ERCC6LQ2NKX8 1250 aa15.22■□□□□ 0.03
LYSMD4-206ENST00000479791 CEP57L1Q8IYX8 460 aa15.22■□□□□ 0.03
LYSMD4-206ENST00000479791 TCEANC2Q96MN5 208 aa15.22■□□□□ 0.03
LYSMD4-206ENST00000479791 NAT10Q9H0A0 1025 aaKnown RBP15.22■□□□□ 0.03
LYSMD4-206ENST00000479791 H3BQV1 296 aa15.22■□□□□ 0.03
LYSMD4-206ENST00000479791 SOX12O15370 315 aa15.22■□□□□ 0.03
LYSMD4-206ENST00000479791 STK3Q13188 491 aa15.22■□□□□ 0.03
LYSMD4-206ENST00000479791 KRT32Q14532 448 aa15.22■□□□□ 0.03
LYSMD4-206ENST00000479791 IFFO2Q5TF58 517 aa15.22■□□□□ 0.03
LYSMD4-206ENST00000479791 E4F1Q66K89 784 aaPredicted RBP15.22■□□□□ 0.03
LYSMD4-206ENST00000479791 CCAR1Q8IX12 1150 aaKnown RBP15.22■□□□□ 0.03
LYSMD4-206ENST00000479791 MED23Q9ULK4 1368 aa15.22■□□□□ 0.03
LYSMD4-206ENST00000479791 HOXB7P09629 217 aa15.21■□□□□ 0.03
LYSMD4-206ENST00000479791 CLCN6P51797 869 aa15.21■□□□□ 0.03
LYSMD4-206ENST00000479791 CCDC150Q8NCX0 1101 aa15.21■□□□□ 0.03
LYSMD4-206ENST00000479791 PI4KAP2A4QPH2 592 aa15.21■□□□□ 0.02
LYSMD4-206ENST00000479791 JAK2O60674 1132 aa15.21■□□□□ 0.02
LYSMD4-206ENST00000479791 ADD1P35611 737 aaKnown RBP15.21■□□□□ 0.02
LYSMD4-206ENST00000479791 ATL3Q6DD88 541 aa15.21■□□□□ 0.02
LYSMD4-206ENST00000479791 CCDC73Q6ZRK6 1079 aa15.21■□□□□ 0.02
LYSMD4-206ENST00000479791 AACSQ86V21 672 aa15.21■□□□□ 0.02
LYSMD4-206ENST00000479791 PI4KAP1Q8N8J0 262 aa15.21■□□□□ 0.02
LYSMD4-206ENST00000479791 HDAC5Q9UQL6 1122 aa15.21■□□□□ 0.02
LYSMD4-206ENST00000479791 KINO60870 393 aaKnown RBP15.2■□□□□ 0.02
LYSMD4-206ENST00000479791 PNMA6AP0CW24 399 aaPredicted RBP15.2■□□□□ 0.02
LYSMD4-206ENST00000479791 AMPHP49418 695 aa15.2■□□□□ 0.02
LYSMD4-206ENST00000479791 NBPF11Q86T75 865 aa15.2■□□□□ 0.02
LYSMD4-206ENST00000479791 PPP1R13BQ96KQ4 1090 aa15.2■□□□□ 0.02
LYSMD4-206ENST00000479791 A0A0D9SFI3 127 aa15.2■□□□□ 0.02
LYSMD4-206ENST00000479791 ENGASEQ8NFI3 743 aa15.2■□□□□ 0.02
LYSMD4-206ENST00000479791 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.2■□□□□ 0.02
LYSMD4-206ENST00000479791 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.2■□□□□ 0.02
LYSMD4-206ENST00000479791 FAM160A1Q05DH4 1040 aa15.19■□□□□ 0.02
LYSMD4-206ENST00000479791 USPL1Q5W0Q7 1092 aa15.19■□□□□ 0.02
LYSMD4-206ENST00000479791 ZRANB2O95218 330 aaKnown RBP eCLIP15.19■□□□□ 0.02
LYSMD4-206ENST00000479791 NAA16Q6N069 864 aaPredicted RBP15.19■□□□□ 0.02
LYSMD4-206ENST00000479791 IPO4Q8TEX9 1081 aaKnown RBP15.19■□□□□ 0.02
LYSMD4-206ENST00000479791 LLPHQ9BRT6 129 aaKnown RBP15.19■□□□□ 0.02
LYSMD4-206ENST00000479791 GOLPH3LQ9H4A5 285 aa15.19■□□□□ 0.02
LYSMD4-206ENST00000479791 ARGLU1Q9NWB6 273 aaPredicted RBP15.19■□□□□ 0.02
LYSMD4-206ENST00000479791 NAP1L2Q9ULW6 460 aaPredicted RBP15.19■□□□□ 0.02
LYSMD4-206ENST00000479791 TAF6LQ9Y6J9 622 aa15.19■□□□□ 0.02
LYSMD4-206ENST00000479791 PTPRUQ92729 1446 aa15.19■□□□□ 0.02
LYSMD4-206ENST00000479791 NPHP1O15259 732 aa15.19■□□□□ 0.02
LYSMD4-206ENST00000479791 NRDCO43847 1150 aa15.19■□□□□ 0.02
LYSMD4-206ENST00000479791 PLA2G4AP47712 749 aa15.19■□□□□ 0.02
LYSMD4-206ENST00000479791 PDE4CQ08493 712 aa15.19■□□□□ 0.02
LYSMD4-206ENST00000479791 TEX35Q5T0J7 233 aa15.19■□□□□ 0.02
LYSMD4-206ENST00000479791 AOPEPQ8N6M6 819 aa15.19■□□□□ 0.02
LYSMD4-206ENST00000479791 CAPN2P17655 700 aa15.18■□□□□ 0.02
LYSMD4-206ENST00000479791 HNRNPH2P55795 449 aaKnown RBP15.18■□□□□ 0.02
LYSMD4-206ENST00000479791 SYT10Q6XYQ8 523 aa15.18■□□□□ 0.02
LYSMD4-206ENST00000479791 SMARCC2Q8TAQ2 1214 aa15.18■□□□□ 0.02
LYSMD4-206ENST00000479791 DDX11Q96FC9 970 aa15.18■□□□□ 0.02
LYSMD4-206ENST00000479791 ATP8B1O43520 1251 aa15.18■□□□□ 0.02
LYSMD4-206ENST00000479791 ARHGAP29Q52LW3 1261 aa15.18■□□□□ 0.02
LYSMD4-206ENST00000479791 ROBO2Q9HCK4 1378 aa15.18■□□□□ 0.02
LYSMD4-206ENST00000479791 ALDH1L1O75891 902 aa15.17■□□□□ 0.02
LYSMD4-206ENST00000479791 EIF2S2P20042 333 aaKnown RBP15.17■□□□□ 0.02
LYSMD4-206ENST00000479791 TPM4P67936 248 aa15.17■□□□□ 0.02
LYSMD4-206ENST00000479791 BPIFA3Q9BQP9 254 aa15.17■□□□□ 0.02
LYSMD4-206ENST00000479791 FSD1Q9BTV5 496 aa15.17■□□□□ 0.02
LYSMD4-206ENST00000479791 CHPF2Q9P2E5 772 aa15.17■□□□□ 0.02
LYSMD4-206ENST00000479791 CCP110O43303 1012 aa15.17■□□□□ 0.02
LYSMD4-206ENST00000479791 HDGFP51858 240 aaKnown RBP15.17■□□□□ 0.02
LYSMD4-206ENST00000479791 TMCO3Q6UWJ1 677 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms