RNA–Protein interactions for RNA: ENST00000479707.1

AGRN-208, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-208ENST00000479707 BRPF1P55201 1214 aaPredicted RBP23.9■■□□□ 1.42
AGRN-208ENST00000479707 GRAPQ13588 217 aa23.9■■□□□ 1.42
AGRN-208ENST00000479707 C9orf131Q5VYM1 1079 aa23.9■■□□□ 1.42
AGRN-208ENST00000479707 GRAPLQ8TC17 118 aaPredicted RBP23.9■■□□□ 1.42
AGRN-208ENST00000479707 PRELPP51888 382 aa23.89■■□□□ 1.41
AGRN-208ENST00000479707 CASP7P55210 303 aa23.89■■□□□ 1.41
AGRN-208ENST00000479707 CCDC152Q4G0S7 254 aa23.89■■□□□ 1.41
AGRN-208ENST00000479707 FRAT1Q92837 279 aaPredicted RBP23.89■■□□□ 1.41
AGRN-208ENST00000479707 CELF1Q92879 486 aaKnown RBP23.89■■□□□ 1.41
AGRN-208ENST00000479707 SEC31BQ9NQW1 1179 aa23.89■■□□□ 1.41
AGRN-208ENST00000479707 C9orf78Q9NZ63 289 aaPredicted RBP23.89■■□□□ 1.41
AGRN-208ENST00000479707 RNF181Q9P0P0 153 aa23.89■■□□□ 1.41
AGRN-208ENST00000479707 BBOX1O75936 387 aa23.88■■□□□ 1.41
AGRN-208ENST00000479707 CTSWP56202 376 aa23.88■■□□□ 1.41
AGRN-208ENST00000479707 MYH3P11055 1940 aa23.88■■□□□ 1.41
AGRN-208ENST00000479707 GRM8O00222 908 aa23.87■■□□□ 1.41
AGRN-208ENST00000479707 API5Q9BZZ5 524 aaKnown RBP23.87■■□□□ 1.41
AGRN-208ENST00000479707 TAOK3Q9H2K8 898 aa23.87■■□□□ 1.41
AGRN-208ENST00000479707 KIF16BQ96L93 1317 aa23.86■■□□□ 1.41
AGRN-208ENST00000479707 RTKN2Q8IZC4 609 aa23.86■■□□□ 1.41
AGRN-208ENST00000479707 TTLL11Q8NHH1 800 aa23.86■■□□□ 1.41
AGRN-208ENST00000479707 TMX4Q9H1E5 349 aaPredicted RBP23.86■■□□□ 1.41
AGRN-208ENST00000479707 COL4A1P02462 1669 aa23.86■■□□□ 1.41
AGRN-208ENST00000479707 LMNB1P20700 586 aa23.85■■□□□ 1.41
AGRN-208ENST00000479707 ATP6V0A2Q9Y487 856 aa23.85■■□□□ 1.41
AGRN-208ENST00000479707 CC2D2BQ6DHV5 1058 aa23.84■■□□□ 1.41
AGRN-208ENST00000479707 SP8Q8IXZ3 490 aa23.84■■□□□ 1.41
AGRN-208ENST00000479707 PLA2G12BQ9BX93 195 aa23.84■■□□□ 1.41
AGRN-208ENST00000479707 GREM2Q9H772 168 aa23.84■■□□□ 1.41
AGRN-208ENST00000479707 IPO8O15397 1037 aaKnown RBP23.83■■□□□ 1.41
AGRN-208ENST00000479707 NBPF7P0C2Y1 421 aaPredicted RBP23.83■■□□□ 1.41
AGRN-208ENST00000479707 RPS8P62241 208 aaKnown RBP23.83■■□□□ 1.41
AGRN-208ENST00000479707 FKBP4Q02790 459 aaKnown RBP eCLIP23.83■■□□□ 1.41
AGRN-208ENST00000479707 ZNF277Q9NRM2 450 aaPredicted RBP23.83■■□□□ 1.41
AGRN-208ENST00000479707 TNNQ9UQP3 1299 aa23.83■■□□□ 1.41
AGRN-208ENST00000479707 ZNF526Q8TF50 670 aaPredicted RBP23.82■■□□□ 1.4
AGRN-208ENST00000479707 ARHGAP45Q92619 1136 aa23.82■■□□□ 1.4
AGRN-208ENST00000479707 LTBP3Q9NS15 1303 aa23.82■■□□□ 1.4
AGRN-208ENST00000479707 CCT4P50991 539 aaKnown RBP23.81■■□□□ 1.4
AGRN-208ENST00000479707 FOXO4P98177 505 aa23.81■■□□□ 1.4
AGRN-208ENST00000479707 EPHA10Q5JZY3 1008 aa23.81■■□□□ 1.4
AGRN-208ENST00000479707 ZNF784Q8NCA9 323 aaPredicted RBP23.81■■□□□ 1.4
AGRN-208ENST00000479707 SUCLG2Q96I99 432 aa23.81■■□□□ 1.4
AGRN-208ENST00000479707 CHMP3Q9Y3E7 222 aa23.81■■□□□ 1.4
AGRN-208ENST00000479707 CSF1RP07333 972 aa23.8■■□□□ 1.4
AGRN-208ENST00000479707 ANKRD18AQ8IVF6 992 aa23.8■■□□□ 1.4
AGRN-208ENST00000479707 CLUAP1Q96AJ1 413 aa23.8■■□□□ 1.4
AGRN-208ENST00000479707 SNED1Q8TER0 1413 aa23.79■■□□□ 1.4
AGRN-208ENST00000479707 TRIM27P14373 513 aa23.79■■□□□ 1.4
AGRN-208ENST00000479707 FAM161AQ3B820 660 aa23.79■■□□□ 1.4
AGRN-208ENST00000479707 ATF7IPQ6VMQ6 1270 aa23.79■■□□□ 1.4
AGRN-208ENST00000479707 TMC4Q7Z404 712 aa23.79■■□□□ 1.4
AGRN-208ENST00000479707 MPNDQ8N594 471 aa23.79■■□□□ 1.4
AGRN-208ENST00000479707 USP44Q9H0E7 712 aa23.79■■□□□ 1.4
AGRN-208ENST00000479707 SPEF2Q9C093 1822 aa23.78■■□□□ 1.4
AGRN-208ENST00000479707 ITGA6P23229 1130 aa23.78■■□□□ 1.4
AGRN-208ENST00000479707 GRIPAP1Q4V328 841 aa23.78■■□□□ 1.4
AGRN-208ENST00000479707 ZKSCAN2Q63HK3 967 aa23.78■■□□□ 1.4
AGRN-208ENST00000479707 LMBR1LQ6UX01 489 aa23.78■■□□□ 1.4
AGRN-208ENST00000479707 DPP8Q6V1X1 898 aaPredicted RBP23.78■■□□□ 1.4
AGRN-208ENST00000479707 CDC5LQ99459 802 aaKnown RBP23.78■■□□□ 1.4
AGRN-208ENST00000479707 PSMD1Q99460 953 aa23.78■■□□□ 1.4
AGRN-208ENST00000479707 DICER1Q9UPY3 1922 aaKnown RBP23.78■■□□□ 1.4
AGRN-208ENST00000479707 UTYO14607 1347 aa23.78■■□□□ 1.4
AGRN-208ENST00000479707 NSFL1CQ9UNZ2 370 aaKnown RBP23.77■■□□□ 1.4
AGRN-208ENST00000479707 IARSP41252 1262 aaKnown RBP23.76■■□□□ 1.39
AGRN-208ENST00000479707 GPSM2P81274 684 aa23.76■■□□□ 1.39
AGRN-208ENST00000479707 KAZALD1Q96I82 304 aa23.76■■□□□ 1.39
AGRN-208ENST00000479707 ANKRD18BA2A2Z9 1011 aa23.75■■□□□ 1.39
AGRN-208ENST00000479707 TIAM2Q8IVF5 1701 aa23.75■■□□□ 1.39
AGRN-208ENST00000479707 RTL9Q8NET4 1388 aa23.75■■□□□ 1.39
AGRN-208ENST00000479707 LRRC37AA6NMS7 1700 aa23.74■■□□□ 1.39
AGRN-208ENST00000479707 IGHMBP2P38935 993 aaKnown RBP23.74■■□□□ 1.39
AGRN-208ENST00000479707 IFIT5Q13325 482 aaKnown RBP23.74■■□□□ 1.39
AGRN-208ENST00000479707 INTS3Q68E01 1043 aaKnown RBP23.74■■□□□ 1.39
AGRN-208ENST00000479707 BICC1Q9H694 974 aaKnown RBP23.74■■□□□ 1.39
AGRN-208ENST00000479707 ANKIB1Q9P2G1 1089 aa23.73■■□□□ 1.39
AGRN-208ENST00000479707 RCAN3Q9UKA8 241 aa23.73■■□□□ 1.39
AGRN-208ENST00000479707 PPIP5K2O43314 1243 aa23.72■■□□□ 1.39
AGRN-208ENST00000479707 UBTFL1P0CB47 393 aaPredicted RBP23.72■■□□□ 1.39
AGRN-208ENST00000479707 AOC3Q16853 763 aa23.72■■□□□ 1.39
AGRN-208ENST00000479707 CCDC57Q2TAC2 916 aa23.72■■□□□ 1.39
AGRN-208ENST00000479707 LARGE2Q8N3Y3 721 aa23.72■■□□□ 1.39
AGRN-208ENST00000479707 SUPT20HQ8NEM7 779 aa23.72■■□□□ 1.39
AGRN-208ENST00000479707 ZNF594Q96JF6 807 aaPredicted RBP23.72■■□□□ 1.39
AGRN-208ENST00000479707 MPHOSPH8Q99549 860 aa23.72■■□□□ 1.39
AGRN-208ENST00000479707 GPBP1L1Q9HC44 474 aaPredicted RBP23.72■■□□□ 1.39
AGRN-208ENST00000479707 BSDC1Q9NW68 430 aaPredicted RBP23.72■■□□□ 1.39
AGRN-208ENST00000479707 C6orf229H3BNL8 230 aa23.71■■□□□ 1.39
AGRN-208ENST00000479707 TMEM57Q8N5G2 664 aa23.71■■□□□ 1.39
AGRN-208ENST00000479707 MEIS3Q99687 375 aa23.71■■□□□ 1.39
AGRN-208ENST00000479707 RTFDC1Q9BY42 306 aaPredicted RBP23.71■■□□□ 1.39
AGRN-208ENST00000479707 POLLQ9UGP5 575 aa23.71■■□□□ 1.39
AGRN-208ENST00000479707 TAF7LQ5H9L4 462 aa23.7■■□□□ 1.38
AGRN-208ENST00000479707 FTSJ3Q8IY81 847 aaKnown RBP23.7■■□□□ 1.38
AGRN-208ENST00000479707 ANKRD44Q8N8A2 993 aa23.7■■□□□ 1.38
AGRN-208ENST00000479707 JDP2Q8WYK2 163 aa23.7■■□□□ 1.38
AGRN-208ENST00000479707 GPR101Q96P66 508 aaPredicted RBP23.7■■□□□ 1.38
AGRN-208ENST00000479707 MINPP1Q9UNW1 487 aa23.7■■□□□ 1.38
AGRN-208ENST00000479707 RIMBP2O15034 1052 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms