RNA–Protein interactions for RNA: ENST00000479544.6

USP42-206, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 1 (best)

Gene USP42, Length 4,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-206ENST00000479544 KARSQ15046 597 aaKnown RBP15.7■□□□□ 0.1
USP42-206ENST00000479544 RAI14Q9P0K7 980 aa15.7■□□□□ 0.1
USP42-206ENST00000479544 ZBTB22O15209 634 aa15.7■□□□□ 0.1
USP42-206ENST00000479544 JAK2O60674 1132 aa15.7■□□□□ 0.1
USP42-206ENST00000479544 GOLIM4O00461 696 aa15.7■□□□□ 0.1
USP42-206ENST00000479544 SRRTQ9BXP5 876 aaKnown RBP15.7■□□□□ 0.1
USP42-206ENST00000479544 ZSCAN12O43309 604 aa15.69■□□□□ 0.1
USP42-206ENST00000479544 OTUD7BQ6GQQ9 843 aa15.69■□□□□ 0.1
USP42-206ENST00000479544 ZSCAN25Q6NSZ9 544 aa15.69■□□□□ 0.1
USP42-206ENST00000479544 TTC6Q86TZ1 520 aa15.69■□□□□ 0.1
USP42-206ENST00000479544 RSPH14Q9UHP6 348 aa15.69■□□□□ 0.1
USP42-206ENST00000479544 CTAGE5O15320 804 aa15.69■□□□□ 0.1
USP42-206ENST00000479544 EPB41L2O43491 1005 aaKnown RBP15.69■□□□□ 0.1
USP42-206ENST00000479544 HSP90AB3PQ58FF7 597 aa15.69■□□□□ 0.1
USP42-206ENST00000479544 CCDC191Q8NCU4 936 aa15.69■□□□□ 0.1
USP42-206ENST00000479544 UTP14AQ9BVJ6 771 aaKnown RBP15.69■□□□□ 0.1
USP42-206ENST00000479544 DEF6Q9H4E7 631 aa15.69■□□□□ 0.1
USP42-206ENST00000479544 CFAP65Q6ZU64 1925 aaKnown RBP15.69■□□□□ 0.1
USP42-206ENST00000479544 ATP5J2-PTCD1G3V325 749 aa15.69■□□□□ 0.1
USP42-206ENST00000479544 PTCD1O75127 700 aaKnown RBP15.69■□□□□ 0.1
USP42-206ENST00000479544 DNA2P51530 1060 aa15.69■□□□□ 0.1
USP42-206ENST00000479544 CWF19L2Q2TBE0 894 aaKnown RBP15.69■□□□□ 0.1
USP42-206ENST00000479544 ARFGAP3Q9NP61 516 aa15.69■□□□□ 0.1
USP42-206ENST00000479544 KLHDC4Q8TBB5 520 aa15.68■□□□□ 0.1
USP42-206ENST00000479544 PLEKHF1Q96S99 279 aa15.68■□□□□ 0.1
USP42-206ENST00000479544 ERICH2A1L162 156 aa15.68■□□□□ 0.1
USP42-206ENST00000479544 SGSM2O43147 1006 aa15.68■□□□□ 0.1
USP42-206ENST00000479544 PLEKHO1Q53GL0 409 aaPredicted RBP15.68■□□□□ 0.1
USP42-206ENST00000479544 KIAA1524Q8TCG1 905 aa15.68■□□□□ 0.1
USP42-206ENST00000479544 ORC3Q9UBD5 711 aaPredicted RBP15.68■□□□□ 0.1
USP42-206ENST00000479544 PUF60Q9UHX1 559 aaKnown RBP15.68■□□□□ 0.1
USP42-206ENST00000479544 MARCH6O60337 910 aa15.68■□□□□ 0.1
USP42-206ENST00000479544 PDLIM2Q96JY6 352 aa15.68■□□□□ 0.1
USP42-206ENST00000479544 MYD88Q99836 296 aa15.68■□□□□ 0.1
USP42-206ENST00000479544 ADGBQ8N7X0 1667 aa15.68■□□□□ 0.1
USP42-206ENST00000479544 NR1I2O75469 434 aa15.68■□□□□ 0.1
USP42-206ENST00000479544 GOLGA8BA8MQT2 603 aa15.67■□□□□ 0.1
USP42-206ENST00000479544 ME3Q16798 604 aa15.67■□□□□ 0.1
USP42-206ENST00000479544 RUFY3Q7L099 469 aa15.67■□□□□ 0.1
USP42-206ENST00000479544 CNNM3Q8NE01 707 aa15.67■□□□□ 0.1
USP42-206ENST00000479544 NCOA5Q9HCD5 579 aaKnown RBP15.67■□□□□ 0.1
USP42-206ENST00000479544 ACEP12821 1306 aa15.67■□□□□ 0.1
USP42-206ENST00000479544 APOBRQ0VD83 1088 aa15.67■□□□□ 0.1
USP42-206ENST00000479544 PTPN21Q16825 1174 aa15.67■□□□□ 0.1
USP42-206ENST00000479544 CERS3Q8IU89 383 aa15.67■□□□□ 0.1
USP42-206ENST00000479544 EDC3Q96F86 508 aaKnown RBP15.67■□□□□ 0.1
USP42-206ENST00000479544 CARD6Q9BX69 1037 aa15.67■□□□□ 0.1
USP42-206ENST00000479544 SMARCE1Q969G3 411 aa15.67■□□□□ 0.1
USP42-206ENST00000479544 PUS7Q96PZ0 661 aaKnown RBP15.67■□□□□ 0.1
USP42-206ENST00000479544 KDM5DQ9BY66 1539 aa15.67■□□□□ 0.1
USP42-206ENST00000479544 MAST1Q9Y2H9 1570 aa15.66■□□□□ 0.1
USP42-206ENST00000479544 CEP170BQ9Y4F5 1589 aaPredicted RBP15.66■□□□□ 0.1
USP42-206ENST00000479544 NBPF7P0C2Y1 421 aaPredicted RBP15.66■□□□□ 0.1
USP42-206ENST00000479544 CCDC129Q6ZRS4 1044 aa15.66■□□□□ 0.1
USP42-206ENST00000479544 NEK11Q8NG66 645 aa15.66■□□□□ 0.1
USP42-206ENST00000479544 LEO1Q8WVC0 666 aaPredicted RBP15.66■□□□□ 0.1
USP42-206ENST00000479544 ABCC4O15439 1325 aa15.66■□□□□ 0.1
USP42-206ENST00000479544 SOS1Q07889 1333 aaPredicted RBP15.66■□□□□ 0.1
USP42-206ENST00000479544 CAPN2P17655 700 aa15.66■□□□□ 0.1
USP42-206ENST00000479544 LZTFL1Q9NQ48 299 aa15.66■□□□□ 0.1
USP42-206ENST00000479544 UGGT1Q9NYU2 1555 aa15.66■□□□□ 0.1
USP42-206ENST00000479544 IDH1O75874 414 aaKnown RBP15.66■□□□□ 0.1
USP42-206ENST00000479544 PTH1RQ03431 593 aa15.66■□□□□ 0.1
USP42-206ENST00000479544 ARID5BQ14865 1188 aa15.66■□□□□ 0.1
USP42-206ENST00000479544 MTMR6Q9Y217 621 aa15.66■□□□□ 0.1
USP42-206ENST00000479544 CDC42BPBQ9Y5S2 1711 aa15.66■□□□□ 0.1
USP42-206ENST00000479544 HSPA4P34932 840 aa15.65■□□□□ 0.1
USP42-206ENST00000479544 ADCK5Q3MIX3 580 aa15.65■□□□□ 0.1
USP42-206ENST00000479544 TTC39AQ5SRH9 613 aa15.65■□□□□ 0.1
USP42-206ENST00000479544 KRBA2Q6ZNG9 492 aa15.65■□□□□ 0.1
USP42-206ENST00000479544 CACTINQ8WUQ7 758 aaKnown RBP15.65■□□□□ 0.1
USP42-206ENST00000479544 KIF5CO60282 957 aa15.65■□□□□ 0.1
USP42-206ENST00000479544 VPS53Q5VIR6 699 aa15.65■□□□□ 0.1
USP42-206ENST00000479544 RABEP2Q9H5N1 569 aa15.65■□□□□ 0.1
USP42-206ENST00000479544 U3KPZ7 1027 aaPredicted RBP15.65■□□□□ 0.1
USP42-206ENST00000479544 CPS1P31327 1500 aa15.65■□□□□ 0.1
USP42-206ENST00000479544 ERO1AQ96HE7 468 aa15.65■□□□□ 0.1
USP42-206ENST00000479544 IL13P35225 146 aa15.65■□□□□ 0.1
USP42-206ENST00000479544 EVCP57679 992 aa15.65■□□□□ 0.1
USP42-206ENST00000479544 MICU3Q86XE3 530 aa15.65■□□□□ 0.1
USP42-206ENST00000479544 MRPS27Q92552 414 aaKnown RBP15.65■□□□□ 0.1
USP42-206ENST00000479544 CRACR2AQ9BSW2 395 aa15.65■□□□□ 0.1
USP42-206ENST00000479544 UBE3BQ7Z3V4 1068 aa15.64■□□□□ 0.09
USP42-206ENST00000479544 VPS18Q9P253 973 aa15.64■□□□□ 0.09
USP42-206ENST00000479544 RHOXF2BP0C7M4 288 aa15.64■□□□□ 0.09
USP42-206ENST00000479544 RHOXF2Q9BQY4 288 aa15.64■□□□□ 0.09
USP42-206ENST00000479544 RTL1A6NKG5 1358 aa15.64■□□□□ 0.09
USP42-206ENST00000479544 PPARDQ03181 441 aa15.64■□□□□ 0.09
USP42-206ENST00000479544 RAD50Q92878 1312 aa15.64■□□□□ 0.09
USP42-206ENST00000479544 LARGE1O95461 756 aa15.63■□□□□ 0.09
USP42-206ENST00000479544 IBTKQ9P2D0 1353 aaPredicted RBP15.63■□□□□ 0.09
USP42-206ENST00000479544 CCDC158Q5M9N0 1113 aa15.63■□□□□ 0.09
USP42-206ENST00000479544 PDIA4P13667 645 aaKnown RBP15.63■□□□□ 0.09
USP42-206ENST00000479544 RXRAP19793 462 aa15.63■□□□□ 0.09
USP42-206ENST00000479544 RDXP35241 583 aaKnown RBP15.63■□□□□ 0.09
USP42-206ENST00000479544 SYKP43405 635 aa15.63■□□□□ 0.09
USP42-206ENST00000479544 CCDC150Q8NCX0 1101 aa15.63■□□□□ 0.09
USP42-206ENST00000479544 ZSCAN16Q9H4T2 348 aaPredicted RBP15.63■□□□□ 0.09
USP42-206ENST00000479544 CEP126Q9P2H0 1117 aa15.63■□□□□ 0.09
USP42-206ENST00000479544 AMOTL2Q9Y2J4 779 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms