RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 MYD88Q99836 296 aa15.8■□□□□ 0.12
PDZRN3-208ENST00000479530 ZSWIM6Q9HCJ5 1215 aa15.8■□□□□ 0.12
PDZRN3-208ENST00000479530 NCBP1Q09161 790 aaKnown RBP15.8■□□□□ 0.12
PDZRN3-208ENST00000479530 NMIQ13287 307 aaPredicted RBP15.8■□□□□ 0.12
PDZRN3-208ENST00000479530 SLC52A2Q9HAB3 445 aa15.8■□□□□ 0.12
PDZRN3-208ENST00000479530 N4BP2Q86UW6 1770 aaPredicted RBP15.8■□□□□ 0.12
PDZRN3-208ENST00000479530 NCAPD2Q15021 1401 aa15.79■□□□□ 0.12
PDZRN3-208ENST00000479530 LMO7Q8WWI1 1683 aa15.79■□□□□ 0.12
PDZRN3-208ENST00000479530 MAP3K11Q16584 847 aa15.79■□□□□ 0.12
PDZRN3-208ENST00000479530 LARP1BQ659C4 914 aaKnown RBP15.79■□□□□ 0.12
PDZRN3-208ENST00000479530 RAPGEF4Q8WZA2 1011 aa15.79■□□□□ 0.12
PDZRN3-208ENST00000479530 NUP62CLQ9H1M0 184 aa15.79■□□□□ 0.12
PDZRN3-208ENST00000479530 DACT1Q9NYF0 836 aa15.79■□□□□ 0.12
PDZRN3-208ENST00000479530 TFIP11Q9UBB9 837 aaKnown RBP15.79■□□□□ 0.12
PDZRN3-208ENST00000479530 CYP46A1Q9Y6A2 500 aa15.79■□□□□ 0.12
PDZRN3-208ENST00000479530 NEURL1BA8MQ27 555 aa15.79■□□□□ 0.12
PDZRN3-208ENST00000479530 G3BP1Q13283 466 aaKnown RBP eCLIP15.79■□□□□ 0.12
PDZRN3-208ENST00000479530 ANO6Q4KMQ2 910 aa15.79■□□□□ 0.12
PDZRN3-208ENST00000479530 CBX8Q9HC52 389 aa15.79■□□□□ 0.12
PDZRN3-208ENST00000479530 KDM6AO15550 1401 aaPredicted RBP15.79■□□□□ 0.12
PDZRN3-208ENST00000479530 NPHP3Q7Z494 1330 aa15.78■□□□□ 0.12
PDZRN3-208ENST00000479530 A0A0D9SFI3 127 aa15.78■□□□□ 0.12
PDZRN3-208ENST00000479530 ATP5J2-PTCD1G3V325 749 aa15.78■□□□□ 0.12
PDZRN3-208ENST00000479530 PTCD1O75127 700 aaKnown RBP15.78■□□□□ 0.12
PDZRN3-208ENST00000479530 PHKG2P15735 406 aa15.78■□□□□ 0.12
PDZRN3-208ENST00000479530 GOLGA6L6A8MZA4 724 aa15.78■□□□□ 0.12
PDZRN3-208ENST00000479530 CYP27B1O15528 508 aa15.77■□□□□ 0.12
PDZRN3-208ENST00000479530 NECTIN1Q15223 517 aa15.77■□□□□ 0.12
PDZRN3-208ENST00000479530 GTPBP4Q9BZE4 634 aaKnown RBP15.77■□□□□ 0.12
PDZRN3-208ENST00000479530 CCDC9Q9Y3X0 531 aaKnown RBP15.77■□□□□ 0.12
PDZRN3-208ENST00000479530 RBM8AQ9Y5S9 174 aaKnown RBP15.77■□□□□ 0.12
PDZRN3-208ENST00000479530 SLIT3O75094 1523 aa15.77■□□□□ 0.12
PDZRN3-208ENST00000479530 C1orf167Q5SNV9 1468 aa15.77■□□□□ 0.12
PDZRN3-208ENST00000479530 TPM3P06753 285 aa15.77■□□□□ 0.11
PDZRN3-208ENST00000479530 CSB-PGBD3P0DP91 1061 aa15.77■□□□□ 0.11
PDZRN3-208ENST00000479530 KRT85P78386 507 aa15.77■□□□□ 0.11
PDZRN3-208ENST00000479530 GCKRQ14397 625 aa15.77■□□□□ 0.11
PDZRN3-208ENST00000479530 LRP10Q7Z4F1 713 aa15.77■□□□□ 0.11
PDZRN3-208ENST00000479530 EVI5LQ96CN4 794 aa15.77■□□□□ 0.11
PDZRN3-208ENST00000479530 SH2B1Q9NRF2 756 aaPredicted RBP15.77■□□□□ 0.11
PDZRN3-208ENST00000479530 UTYO14607 1347 aa15.77■□□□□ 0.11
PDZRN3-208ENST00000479530 ZNF589Q86UQ0 364 aaPredicted RBP15.76■□□□□ 0.11
PDZRN3-208ENST00000479530 DRC7Q8IY82 874 aa15.76■□□□□ 0.11
PDZRN3-208ENST00000479530 CHMP4AQ9BY43 222 aa15.76■□□□□ 0.11
PDZRN3-208ENST00000479530 DDX58O95786 925 aaKnown RBP15.76■□□□□ 0.11
PDZRN3-208ENST00000479530 ZSCAN31Q96LW9 406 aaPredicted RBP15.76■□□□□ 0.11
PDZRN3-208ENST00000479530 TNMDQ9H2S6 317 aa15.76■□□□□ 0.11
PDZRN3-208ENST00000479530 C19orf44Q9H6X5 657 aa15.76■□□□□ 0.11
PDZRN3-208ENST00000479530 CREB3L3Q68CJ9 461 aa15.75■□□□□ 0.11
PDZRN3-208ENST00000479530 ZSCAN25Q6NSZ9 544 aa15.75■□□□□ 0.11
PDZRN3-208ENST00000479530 CRYBG1Q9Y4K1 1723 aa15.75■□□□□ 0.11
PDZRN3-208ENST00000479530 CCDC171Q6TFL3 1326 aa15.75■□□□□ 0.11
PDZRN3-208ENST00000479530 ERC1Q8IUD2 1116 aa15.75■□□□□ 0.11
PDZRN3-208ENST00000479530 TRIM5Q9C035 493 aa15.75■□□□□ 0.11
PDZRN3-208ENST00000479530 DNAJC5Q9H3Z4 198 aa15.75■□□□□ 0.11
PDZRN3-208ENST00000479530 MEGF6O75095 1541 aa15.75■□□□□ 0.11
PDZRN3-208ENST00000479530 NR1I2O75469 434 aa15.75■□□□□ 0.11
PDZRN3-208ENST00000479530 CCDC144BQ3MJ40 725 aa15.75■□□□□ 0.11
PDZRN3-208ENST00000479530 LARP1Q6PKG0 1096 aaKnown RBP15.75■□□□□ 0.11
PDZRN3-208ENST00000479530 CCDC144CPQ8IYA2 1237 aa15.75■□□□□ 0.11
PDZRN3-208ENST00000479530 KCNB2Q92953 911 aa15.75■□□□□ 0.11
PDZRN3-208ENST00000479530 TM6SF1Q9BZW5 370 aa15.75■□□□□ 0.11
PDZRN3-208ENST00000479530 RGPD5Q99666 1765 aa15.74■□□□□ 0.11
PDZRN3-208ENST00000479530 PDIA4P13667 645 aaKnown RBP15.74■□□□□ 0.11
PDZRN3-208ENST00000479530 TATP17735 454 aaPredicted RBP15.74■□□□□ 0.11
PDZRN3-208ENST00000479530 KCNJ4P48050 445 aa15.74■□□□□ 0.11
PDZRN3-208ENST00000479530 ZNF75DP51815 510 aa15.74■□□□□ 0.11
PDZRN3-208ENST00000479530 SLFNL1Q499Z3 407 aa15.74■□□□□ 0.11
PDZRN3-208ENST00000479530 ANKRD13DQ6ZTN6 518 aa15.74■□□□□ 0.11
PDZRN3-208ENST00000479530 UBE3BQ7Z3V4 1068 aa15.74■□□□□ 0.11
PDZRN3-208ENST00000479530 PLA2G4DQ86XP0 818 aa15.74■□□□□ 0.11
PDZRN3-208ENST00000479530 CACTINQ8WUQ7 758 aaKnown RBP15.74■□□□□ 0.11
PDZRN3-208ENST00000479530 RUFY2Q8WXA3 655 aa15.74■□□□□ 0.11
PDZRN3-208ENST00000479530 GPATCH3Q96I76 525 aa15.74■□□□□ 0.11
PDZRN3-208ENST00000479530 METTL22Q9BUU2 404 aaPredicted RBP15.74■□□□□ 0.11
PDZRN3-208ENST00000479530 DNAJC25Q9H1X3 360 aa15.74■□□□□ 0.11
PDZRN3-208ENST00000479530 TNNT1P13805 278 aa15.74■□□□□ 0.11
PDZRN3-208ENST00000479530 STK3Q13188 491 aa15.74■□□□□ 0.11
PDZRN3-208ENST00000479530 MAP4K1Q92918 833 aa15.74■□□□□ 0.11
PDZRN3-208ENST00000479530 FSD1Q9BTV5 496 aa15.74■□□□□ 0.11
PDZRN3-208ENST00000479530 SLC27A2O14975 620 aa15.73■□□□□ 0.11
PDZRN3-208ENST00000479530 TFCP2Q12800 502 aa15.73■□□□□ 0.11
PDZRN3-208ENST00000479530 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.73■□□□□ 0.11
PDZRN3-208ENST00000479530 ARID5BQ14865 1188 aa15.73■□□□□ 0.11
PDZRN3-208ENST00000479530 SPATA32Q96LK8 384 aa15.73■□□□□ 0.11
PDZRN3-208ENST00000479530 DBNLQ9UJU6 430 aaKnown RBP15.73■□□□□ 0.11
PDZRN3-208ENST00000479530 ELP1O95163 1332 aa15.73■□□□□ 0.11
PDZRN3-208ENST00000479530 PHRF1Q9P1Y6 1649 aaKnown RBP15.73■□□□□ 0.11
PDZRN3-208ENST00000479530 ZKSCAN1P17029 563 aaPredicted RBP15.72■□□□□ 0.11
PDZRN3-208ENST00000479530 LEO1Q8WVC0 666 aaPredicted RBP15.72■□□□□ 0.11
PDZRN3-208ENST00000479530 PGBD1Q96JS3 809 aa15.72■□□□□ 0.11
PDZRN3-208ENST00000479530 SEC62Q99442 399 aaKnown RBP15.72■□□□□ 0.11
PDZRN3-208ENST00000479530 RFX5P48382 616 aaPredicted RBP15.72■□□□□ 0.11
PDZRN3-208ENST00000479530 PTPN12Q05209 780 aaKnown RBP15.72■□□□□ 0.11
PDZRN3-208ENST00000479530 NEXNQ0ZGT2 675 aa15.72■□□□□ 0.11
PDZRN3-208ENST00000479530 CCDC129Q6ZRS4 1044 aa15.72■□□□□ 0.11
PDZRN3-208ENST00000479530 CTNNA3Q9UI47 895 aa15.72■□□□□ 0.11
PDZRN3-208ENST00000479530 COL15A1P39059 1388 aa15.72■□□□□ 0.11
PDZRN3-208ENST00000479530 KIF20AO95235 890 aa15.71■□□□□ 0.11
PDZRN3-208ENST00000479530 ZNF165P49910 485 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms