RNA–Protein interactions for RNA: ENST00000479398.5

PKP4-209, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-209ENST00000479398 KIF3CO14782 793 aa26.43■■□□□ 1.82
PKP4-209ENST00000479398 PDE8AO60658 829 aa26.43■■□□□ 1.82
PKP4-209ENST00000479398 C1QTNF8P60827 252 aa26.43■■□□□ 1.82
PKP4-209ENST00000479398 NMRK2Q9NPI5 230 aa26.43■■□□□ 1.82
PKP4-209ENST00000479398 CDHR2Q9BYE9 1310 aa26.41■■□□□ 1.82
PKP4-209ENST00000479398 H7C1W4 665 aa26.41■■□□□ 1.82
PKP4-209ENST00000479398 IARSP41252 1262 aaKnown RBP26.41■■□□□ 1.82
PKP4-209ENST00000479398 DPY19L2Q6NUT2 758 aa26.41■■□□□ 1.82
PKP4-209ENST00000479398 SLC51AQ86UW1 340 aa26.41■■□□□ 1.82
PKP4-209ENST00000479398 LINS1Q8NG48 757 aa26.41■■□□□ 1.82
PKP4-209ENST00000479398 F6X3S4 739 aa26.4■■□□□ 1.82
PKP4-209ENST00000479398 GCKRQ14397 625 aa26.4■■□□□ 1.82
PKP4-209ENST00000479398 TMC4Q7Z404 712 aa26.4■■□□□ 1.82
PKP4-209ENST00000479398 RRAGCQ9HB90 399 aa26.4■■□□□ 1.82
PKP4-209ENST00000479398 CELF1Q92879 486 aaKnown RBP26.39■■□□□ 1.82
PKP4-209ENST00000479398 MRPL50Q8N5N7 158 aaKnown RBP26.38■■□□□ 1.81
PKP4-209ENST00000479398 TIAM2Q8IVF5 1701 aa26.38■■□□□ 1.81
PKP4-209ENST00000479398 RPS8P62241 208 aaKnown RBP26.37■■□□□ 1.81
PKP4-209ENST00000479398 CCDC152Q4G0S7 254 aa26.37■■□□□ 1.81
PKP4-209ENST00000479398 BEND3Q5T5X7 828 aa26.36■■□□□ 1.81
PKP4-209ENST00000479398 UBE3BQ7Z3V4 1068 aa26.36■■□□□ 1.81
PKP4-209ENST00000479398 MPNDQ8N594 471 aa26.36■■□□□ 1.81
PKP4-209ENST00000479398 SSH1Q8WYL5 1049 aa26.36■■□□□ 1.81
PKP4-209ENST00000479398 RTFDC1Q9BY42 306 aaPredicted RBP26.35■■□□□ 1.81
PKP4-209ENST00000479398 SEC31BQ9NQW1 1179 aa26.35■■□□□ 1.81
PKP4-209ENST00000479398 CASP7P55210 303 aa26.34■■□□□ 1.81
PKP4-209ENST00000479398 DPP8Q6V1X1 898 aaPredicted RBP26.34■■□□□ 1.81
PKP4-209ENST00000479398 SUPT20HQ8NEM7 779 aa26.34■■□□□ 1.81
PKP4-209ENST00000479398 TTLL11Q8NHH1 800 aa26.34■■□□□ 1.81
PKP4-209ENST00000479398 CCDC85AQ96PX6 553 aaPredicted RBP26.34■■□□□ 1.81
PKP4-209ENST00000479398 VPS33BQ9H267 617 aa26.34■■□□□ 1.81
PKP4-209ENST00000479398 TOMM70O94826 608 aa26.33■■□□□ 1.81
PKP4-209ENST00000479398 CT47B1P0C2W7 299 aaPredicted RBP26.33■■□□□ 1.81
PKP4-209ENST00000479398 CTSWP56202 376 aa26.33■■□□□ 1.81
PKP4-209ENST00000479398 ALDH1L2Q3SY69 923 aa26.33■■□□□ 1.81
PKP4-209ENST00000479398 JDP2Q8WYK2 163 aa26.33■■□□□ 1.81
PKP4-209ENST00000479398 FZD9O00144 591 aa26.32■■□□□ 1.8
PKP4-209ENST00000479398 DDNO94850 711 aaPredicted RBP26.32■■□□□ 1.8
PKP4-209ENST00000479398 VEGFAP15692 232 aaPredicted RBP26.32■■□□□ 1.8
PKP4-209ENST00000479398 LARGE2Q8N3Y3 721 aa26.32■■□□□ 1.8
PKP4-209ENST00000479398 PLA2G12BQ9BX93 195 aa26.32■■□□□ 1.8
PKP4-209ENST00000479398 HNRNPUQ00839 825 aaKnown RBP eCLIP26.31■■□□□ 1.8
PKP4-209ENST00000479398 SLC4A10Q6U841 1118 aa26.31■■□□□ 1.8
PKP4-209ENST00000479398 C16orf71Q8IYS4 520 aaPredicted RBP26.31■■□□□ 1.8
PKP4-209ENST00000479398 POTECB2RU33 542 aa26.3■■□□□ 1.8
PKP4-209ENST00000479398 NSFL1CQ9UNZ2 370 aaKnown RBP26.3■■□□□ 1.8
PKP4-209ENST00000479398 PTPRCP08575 1304 aa26.3■■□□□ 1.8
PKP4-209ENST00000479398 MYH3P11055 1940 aa26.29■■□□□ 1.8
PKP4-209ENST00000479398 COL4A1P02462 1669 aa26.29■■□□□ 1.8
PKP4-209ENST00000479398 PPIP5K2O43314 1243 aa26.29■■□□□ 1.8
PKP4-209ENST00000479398 ALDH1L1O75891 902 aa26.29■■□□□ 1.8
PKP4-209ENST00000479398 BCL2L13Q9BXK5 485 aa26.29■■□□□ 1.8
PKP4-209ENST00000479398 AOC3Q16853 763 aa26.28■■□□□ 1.8
PKP4-209ENST00000479398 ANKRD18AQ8IVF6 992 aa26.28■■□□□ 1.8
PKP4-209ENST00000479398 SRCIN1Q9C0H9 1055 aa26.28■■□□□ 1.8
PKP4-209ENST00000479398 GREM2Q9H772 168 aa26.28■■□□□ 1.8
PKP4-209ENST00000479398 CSF1RP07333 972 aa26.27■■□□□ 1.8
PKP4-209ENST00000479398 GPSM2P81274 684 aa26.27■■□□□ 1.8
PKP4-209ENST00000479398 CDC5LQ99459 802 aaKnown RBP26.27■■□□□ 1.8
PKP4-209ENST00000479398 SMC4Q9NTJ3 1288 aa26.27■■□□□ 1.8
PKP4-209ENST00000479398 ZNF541Q9H0D2 1346 aa26.27■■□□□ 1.8
PKP4-209ENST00000479398 WDR90Q96KV7 1748 aa26.27■■□□□ 1.8
PKP4-209ENST00000479398 LRRC37AA6NMS7 1700 aa26.26■■□□□ 1.79
PKP4-209ENST00000479398 EIF6P56537 245 aaKnown RBP26.26■■□□□ 1.79
PKP4-209ENST00000479398 NIM1KQ8IY84 436 aa26.26■■□□□ 1.79
PKP4-209ENST00000479398 C9orf78Q9NZ63 289 aaPredicted RBP26.26■■□□□ 1.79
PKP4-209ENST00000479398 COL4A5P29400 1685 aa26.25■■□□□ 1.79
PKP4-209ENST00000479398 RTL9Q8NET4 1388 aa26.25■■□□□ 1.79
PKP4-209ENST00000479398 GRM8O00222 908 aa26.25■■□□□ 1.79
PKP4-209ENST00000479398 KIAA2012Q0VF49 1180 aa26.25■■□□□ 1.79
PKP4-209ENST00000479398 RBM46Q8TBY0 533 aaKnown RBP26.25■■□□□ 1.79
PKP4-209ENST00000479398 L3MBTL3Q96JM7 780 aaPredicted RBP26.24■■□□□ 1.79
PKP4-209ENST00000479398 POLLQ9UGP5 575 aa26.24■■□□□ 1.79
PKP4-209ENST00000479398 C6orf229H3BNL8 230 aa26.23■■□□□ 1.79
PKP4-209ENST00000479398 BRPF1P55201 1214 aaPredicted RBP26.23■■□□□ 1.79
PKP4-209ENST00000479398 FOXO4P98177 505 aa26.23■■□□□ 1.79
PKP4-209ENST00000479398 GPC2Q8N158 579 aa26.23■■□□□ 1.79
PKP4-209ENST00000479398 PODXL2Q9NZ53 605 aa26.23■■□□□ 1.79
PKP4-209ENST00000479398 WASHC4Q2M389 1173 aa26.22■■□□□ 1.79
PKP4-209ENST00000479398 BSDC1Q9NW68 430 aaPredicted RBP26.22■■□□□ 1.79
PKP4-209ENST00000479398 ZNRF3Q9ULT6 936 aa26.22■■□□□ 1.79
PKP4-209ENST00000479398 ITGA6P23229 1130 aa26.21■■□□□ 1.79
PKP4-209ENST00000479398 RARSP54136 660 aaKnown RBP26.21■■□□□ 1.79
PKP4-209ENST00000479398 TBC1D16Q8TBP0 767 aa26.21■■□□□ 1.79
PKP4-209ENST00000479398 ANKIB1Q9P2G1 1089 aa26.21■■□□□ 1.79
PKP4-209ENST00000479398 IQCA1LA6NCM1 817 aa26.2■■□□□ 1.78
PKP4-209ENST00000479398 NOB1Q9ULX3 412 aaKnown RBP26.2■■□□□ 1.78
PKP4-209ENST00000479398 GJA3Q9Y6H8 435 aa26.2■■□□□ 1.78
PKP4-209ENST00000479398 DUOX1Q9NRD9 1551 aa26.2■■□□□ 1.78
PKP4-209ENST00000479398 RIMBP2O15034 1052 aa26.19■■□□□ 1.78
PKP4-209ENST00000479398 FSTL1Q12841 308 aa26.19■■□□□ 1.78
PKP4-209ENST00000479398 FAM161AQ3B820 660 aa26.19■■□□□ 1.78
PKP4-209ENST00000479398 EYA3Q99504 573 aa26.19■■□□□ 1.78
PKP4-209ENST00000479398 MINPP1Q9UNW1 487 aa26.19■■□□□ 1.78
PKP4-209ENST00000479398 UTYO14607 1347 aa26.18■■□□□ 1.78
PKP4-209ENST00000479398 IGHMBP2P38935 993 aaKnown RBP26.18■■□□□ 1.78
PKP4-209ENST00000479398 CXCL9Q07325 125 aa26.18■■□□□ 1.78
PKP4-209ENST00000479398 EPHA10Q5JZY3 1008 aa26.18■■□□□ 1.78
PKP4-209ENST00000479398 LMBR1LQ6UX01 489 aa26.18■■□□□ 1.78
PKP4-209ENST00000479398 GGA1Q9UJY5 639 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms