RNA–Protein interactions for RNA: ENST00000479365.5

SSR1-206, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-206ENST00000479365 CCDC87Q9NVE4 849 aa9.74□□□□□ -0.85
SSR1-206ENST00000479365 VIRMAQ69YN4 1812 aaKnown RBP9.74□□□□□ -0.85
SSR1-206ENST00000479365 SOS1Q07889 1333 aaPredicted RBP9.74□□□□□ -0.85
SSR1-206ENST00000479365 CEMIPQ8WUJ3 1361 aa9.74□□□□□ -0.85
SSR1-206ENST00000479365 KIF13BQ9NQT8 1826 aa9.73□□□□□ -0.85
SSR1-206ENST00000479365 A0A0G2JLW4 131 aa9.73□□□□□ -0.85
SSR1-206ENST00000479365 TRAK2O60296 914 aa9.73□□□□□ -0.85
SSR1-206ENST00000479365 CCDC82Q8N4S0 544 aa9.73□□□□□ -0.85
SSR1-206ENST00000479365 ZNF496Q96IT1 587 aaPredicted RBP9.73□□□□□ -0.85
SSR1-206ENST00000479365 ZBTB1Q9Y2K1 713 aa9.73□□□□□ -0.85
SSR1-206ENST00000479365 SIPA1L3O60292 1781 aaPredicted RBP9.73□□□□□ -0.85
SSR1-206ENST00000479365 RCCD1A6NED2 376 aa9.72□□□□□ -0.85
SSR1-206ENST00000479365 KCNQ3O43525 872 aa9.72□□□□□ -0.85
SSR1-206ENST00000479365 U2AF1L5P0DN76 240 aaPredicted RBP9.72□□□□□ -0.85
SSR1-206ENST00000479365 DPEP1P16444 411 aa9.72□□□□□ -0.85
SSR1-206ENST00000479365 U2AF1Q01081 240 aaKnown RBP eCLIP9.72□□□□□ -0.85
SSR1-206ENST00000479365 USPL1Q5W0Q7 1092 aa9.72□□□□□ -0.85
SSR1-206ENST00000479365 CLUAP1Q96AJ1 413 aa9.72□□□□□ -0.85
SSR1-206ENST00000479365 N4BP2Q86UW6 1770 aaPredicted RBP9.71□□□□□ -0.85
SSR1-206ENST00000479365 POLRMTO00411 1230 aaKnown RBP9.71□□□□□ -0.86
SSR1-206ENST00000479365 KCNA3P22001 575 aa9.71□□□□□ -0.86
SSR1-206ENST00000479365 TM4SF1P30408 202 aa9.71□□□□□ -0.86
SSR1-206ENST00000479365 TEFQ10587 303 aa9.71□□□□□ -0.86
SSR1-206ENST00000479365 ZNF790Q6PG37 636 aa9.71□□□□□ -0.86
SSR1-206ENST00000479365 NUDCQ9Y266 331 aa9.71□□□□□ -0.86
SSR1-206ENST00000479365 PARP3Q9Y6F1 533 aa9.71□□□□□ -0.86
SSR1-206ENST00000479365 ADCY9O60503 1353 aa9.71□□□□□ -0.86
SSR1-206ENST00000479365 COL15A1P39059 1388 aa9.71□□□□□ -0.86
SSR1-206ENST00000479365 HEG1Q9ULI3 1381 aa9.71□□□□□ -0.86
SSR1-206ENST00000479365 ATP10DQ9P241 1426 aa9.71□□□□□ -0.86
SSR1-206ENST00000479365 CANXP27824 592 aaKnown RBP9.7□□□□□ -0.86
SSR1-206ENST00000479365 TGFB2P61812 414 aa9.7□□□□□ -0.86
SSR1-206ENST00000479365 MCM10Q7L590 875 aa9.7□□□□□ -0.86
SSR1-206ENST00000479365 LAPTM4BQ86VI4 370 aa9.7□□□□□ -0.86
SSR1-206ENST00000479365 TTC5Q8N0Z6 440 aa9.7□□□□□ -0.86
SSR1-206ENST00000479365 NECTIN2Q92692 538 aa9.7□□□□□ -0.86
SSR1-206ENST00000479365 ZFRQ96KR1 1074 aaKnown RBP9.7□□□□□ -0.86
SSR1-206ENST00000479365 NARFQ9UHQ1 456 aa9.7□□□□□ -0.86
SSR1-206ENST00000479365 EIF5P55010 431 aaKnown RBP9.69□□□□□ -0.86
SSR1-206ENST00000479365 DCTN1Q14203 1278 aa9.69□□□□□ -0.86
SSR1-206ENST00000479365 NFIXQ14938 502 aa9.69□□□□□ -0.86
SSR1-206ENST00000479365 PRAMEF22A3QJZ6 481 aa9.68□□□□□ -0.86
SSR1-206ENST00000479365 BTBD11A6QL63 1104 aa9.68□□□□□ -0.86
SSR1-206ENST00000479365 ZPR1O75312 459 aa9.68□□□□□ -0.86
SSR1-206ENST00000479365 A1BGP04217 495 aa9.68□□□□□ -0.86
SSR1-206ENST00000479365 DNAJB2P25686 324 aa9.68□□□□□ -0.86
SSR1-206ENST00000479365 CHRNA5P30532 468 aa9.68□□□□□ -0.86
SSR1-206ENST00000479365 C1QTNF8P60827 252 aa9.68□□□□□ -0.86
SSR1-206ENST00000479365 MDM2Q00987 491 aaPredicted RBP9.68□□□□□ -0.86
SSR1-206ENST00000479365 SPNS2Q8IVW8 549 aa9.68□□□□□ -0.86
SSR1-206ENST00000479365 BCS1LQ9Y276 419 aa9.68□□□□□ -0.86
SSR1-206ENST00000479365 CARMIL3Q8ND23 1372 aa9.67□□□□□ -0.86
SSR1-206ENST00000479365 GOLGA8CPA6NN73 597 aa9.67□□□□□ -0.86
SSR1-206ENST00000479365 STARD3NLO95772 234 aa9.67□□□□□ -0.86
SSR1-206ENST00000479365 TTLL12Q14166 644 aaPredicted RBP9.67□□□□□ -0.86
SSR1-206ENST00000479365 MCM6Q14566 821 aa9.67□□□□□ -0.86
SSR1-206ENST00000479365 SWT1Q5T5J6 900 aaKnown RBP9.67□□□□□ -0.86
SSR1-206ENST00000479365 SAMD7Q7Z3H4 446 aa9.67□□□□□ -0.86
SSR1-206ENST00000479365 PCMTD1Q96MG8 357 aaPredicted RBP9.67□□□□□ -0.86
SSR1-206ENST00000479365 FMNL2Q96PY5 1086 aa9.67□□□□□ -0.86
SSR1-206ENST00000479365 PLEKHF1Q96S99 279 aa9.67□□□□□ -0.86
SSR1-206ENST00000479365 BRCA1P38398 1863 aaKnown RBP9.67□□□□□ -0.86
SSR1-206ENST00000479365 NRXN2Q9P2S2 1712 aa9.67□□□□□ -0.86
SSR1-206ENST00000479365 GIGYF1O75420 1035 aaPredicted RBP9.66□□□□□ -0.86
SSR1-206ENST00000479365 MS4A1P11836 297 aa9.66□□□□□ -0.86
SSR1-206ENST00000479365 IL6STP40189 918 aaPredicted RBP9.66□□□□□ -0.86
SSR1-206ENST00000479365 PIP4K2AP48426 406 aaPredicted RBP9.66□□□□□ -0.86
SSR1-206ENST00000479365 GIGYF2Q6Y7W6 1299 aaKnown RBP9.66□□□□□ -0.86
SSR1-206ENST00000479365 ZNF526Q8TF50 670 aaPredicted RBP9.66□□□□□ -0.86
SSR1-206ENST00000479365 TEX13AQ9BXU3 409 aaPredicted RBP9.66□□□□□ -0.86
SSR1-206ENST00000479365 TMEM134Q9H6X4 195 aa9.66□□□□□ -0.86
SSR1-206ENST00000479365 TBC1D2BQ9UPU7 963 aa9.66□□□□□ -0.86
SSR1-206ENST00000479365 USP16Q9Y5T5 823 aa9.66□□□□□ -0.86
SSR1-206ENST00000479365 SCN7AQ01118 1682 aa9.65□□□□□ -0.86
SSR1-206ENST00000479365 HTATSF1O43719 755 aaKnown RBP9.65□□□□□ -0.86
SSR1-206ENST00000479365 SERPINB2P05120 415 aa9.65□□□□□ -0.86
SSR1-206ENST00000479365 TBC1D9BQ66K14 1250 aa9.65□□□□□ -0.86
SSR1-206ENST00000479365 BICDL1Q6ZP65 573 aa9.65□□□□□ -0.86
SSR1-206ENST00000479365 ARHGAP27Q6ZUM4 889 aa9.65□□□□□ -0.86
SSR1-206ENST00000479365 RTF1Q92541 710 aaKnown RBP9.65□□□□□ -0.86
SSR1-206ENST00000479365 WNT2BQ93097 391 aa9.65□□□□□ -0.86
SSR1-206ENST00000479365 KCTD12Q96CX2 325 aaKnown RBP9.65□□□□□ -0.86
SSR1-206ENST00000479365 REPIN1Q9BWE0 567 aaKnown RBP9.65□□□□□ -0.86
SSR1-206ENST00000479365 MIS18AQ9NYP9 233 aa9.65□□□□□ -0.86
SSR1-206ENST00000479365 PIM2Q9P1W9 311 aa9.65□□□□□ -0.86
SSR1-206ENST00000479365 ZNF330Q9Y3S2 320 aaPredicted RBP9.65□□□□□ -0.86
SSR1-206ENST00000479365 AFDNP55196 1824 aaKnown RBP9.65□□□□□ -0.86
SSR1-206ENST00000479365 A0A087WZG4 1122 aa9.64□□□□□ -0.87
SSR1-206ENST00000479365 CAMTA2O94983 1202 aa9.64□□□□□ -0.87
SSR1-206ENST00000479365 DDX10Q13206 875 aaKnown RBP9.64□□□□□ -0.87
SSR1-206ENST00000479365 DALRD3Q5D0E6 543 aaKnown RBP9.64□□□□□ -0.87
SSR1-206ENST00000479365 THUMPD2Q9BTF0 503 aaKnown RBP9.64□□□□□ -0.87
SSR1-206ENST00000479365 SNRPA1P09661 255 aaKnown RBP9.63□□□□□ -0.87
SSR1-206ENST00000479365 BCAMP50895 628 aa9.63□□□□□ -0.87
SSR1-206ENST00000479365 NFE2L2Q16236 605 aa9.63□□□□□ -0.87
SSR1-206ENST00000479365 SH3D19Q5HYK7 790 aa9.63□□□□□ -0.87
SSR1-206ENST00000479365 NBPF10Q6P3W6 841 aaKnown RBP9.63□□□□□ -0.87
SSR1-206ENST00000479365 CCDC24Q8N4L8 307 aa9.63□□□□□ -0.87
SSR1-206ENST00000479365 NBPF15Q8N660 670 aa9.63□□□□□ -0.87
SSR1-206ENST00000479365 ANKK1Q8NFD2 765 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms