RNA–Protein interactions for RNA: ENST00000479197.1

RFK-204, Transcript of riboflavin kinase, human

TSL 1 (best)

Gene RFK, Length 1,501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFK-204	ENST00000479197	TAF1	P21675	1872 aa		22.7	■■□□□ 1.22
RFK-204	ENST00000479197	NBPF7	P0C2Y1	421 aa	Predicted RBP	22.7	■■□□□ 1.22
RFK-204	ENST00000479197	CTSW	P56202	376 aa		22.7	■■□□□ 1.22
RFK-204	ENST00000479197	FTSJ3	Q8IY81	847 aa	Known RBP	22.7	■■□□□ 1.22
RFK-204	ENST00000479197	GRIN3B	O60391	1043 aa		22.69	■■□□□ 1.22
RFK-204	ENST00000479197	CCDC152	Q4G0S7	254 aa		22.69	■■□□□ 1.22
RFK-204	ENST00000479197	DDX46	Q7L014	1031 aa	Known RBP	22.69	■■□□□ 1.22
RFK-204	ENST00000479197	USP44	Q9H0E7	712 aa		22.69	■■□□□ 1.22
RFK-204	ENST00000479197	DZIP1L	Q8IYY4	767 aa	Known RBP	22.68	■■□□□ 1.22
RFK-204	ENST00000479197	TTLL11	Q8NHH1	800 aa		22.67	■■□□□ 1.22
RFK-204	ENST00000479197	TMEM57	Q8N5G2	664 aa		22.67	■■□□□ 1.22
RFK-204	ENST00000479197	CCDC85A	Q96PX6	553 aa	Predicted RBP	22.67	■■□□□ 1.22
RFK-204	ENST00000479197	C21orf2	O43822	256 aa		22.66	■■□□□ 1.22
RFK-204	ENST00000479197	GRAP	Q13588	217 aa		22.66	■■□□□ 1.22
RFK-204	ENST00000479197	GRAPL	Q8TC17	118 aa	Predicted RBP	22.66	■■□□□ 1.22
RFK-204	ENST00000479197	MS4A1	P11836	297 aa		22.65	■■□□□ 1.22
RFK-204	ENST00000479197	RLBP1	P12271	317 aa		22.65	■■□□□ 1.22
RFK-204	ENST00000479197	FOXO4	P98177	505 aa		22.65	■■□□□ 1.22
RFK-204	ENST00000479197	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	22.65	■■□□□ 1.22
RFK-204	ENST00000479197	SUCLG2	Q96I99	432 aa		22.65	■■□□□ 1.22
RFK-204	ENST00000479197	ZNF219	Q9P2Y4	722 aa	Predicted RBP	22.65	■■□□□ 1.22
RFK-204	ENST00000479197	RTL9	Q8NET4	1388 aa		22.65	■■□□□ 1.22
RFK-204	ENST00000479197	PPEF1	O14829	653 aa	Predicted RBP	22.64	■■□□□ 1.21
RFK-204	ENST00000479197	PLIN1	O60240	522 aa		22.64	■■□□□ 1.21
RFK-204	ENST00000479197	CSF1R	P07333	972 aa		22.64	■■□□□ 1.21
RFK-204	ENST00000479197	GREM2	Q9H772	168 aa		22.64	■■□□□ 1.21
RFK-204	ENST00000479197	COL4A1	P02462	1669 aa		22.64	■■□□□ 1.21
RFK-204	ENST00000479197	BBOX1	O75936	387 aa		22.63	■■□□□ 1.21
RFK-204	ENST00000479197	UBTFL1	P0CB47	393 aa	Predicted RBP	22.63	■■□□□ 1.21
RFK-204	ENST00000479197	EPHA10	Q5JZY3	1008 aa		22.63	■■□□□ 1.21
RFK-204	ENST00000479197	SOGA3	Q5TF21	947 aa		22.63	■■□□□ 1.21
RFK-204	ENST00000479197	C7orf43	Q8WVR3	580 aa		22.63	■■□□□ 1.21
RFK-204	ENST00000479197	KAZALD1	Q96I82	304 aa		22.63	■■□□□ 1.21
RFK-204	ENST00000479197	FER1L6	Q2WGJ9	1857 aa		22.63	■■□□□ 1.21
RFK-204	ENST00000479197	CELF1	Q92879	486 aa	Known RBP	22.62	■■□□□ 1.21
RFK-204	ENST00000479197	MEIS3	Q99687	375 aa		22.62	■■□□□ 1.21
RFK-204	ENST00000479197	SEC31B	Q9NQW1	1179 aa		22.62	■■□□□ 1.21
RFK-204	ENST00000479197	FAM161A	Q3B820	660 aa		22.62	■■□□□ 1.21
RFK-204	ENST00000479197	LMBR1L	Q6UX01	489 aa		22.62	■■□□□ 1.21
RFK-204	ENST00000479197	ARHGAP27	Q6ZUM4	889 aa		22.62	■■□□□ 1.21
RFK-204	ENST00000479197	ITPRIP	Q8IWB1	547 aa		22.62	■■□□□ 1.21
RFK-204	ENST00000479197	PANK1	Q8TE04	598 aa		22.62	■■□□□ 1.21
RFK-204	ENST00000479197	SPEF2	Q9C093	1822 aa		22.61	■■□□□ 1.21
RFK-204	ENST00000479197	GNAI3	P08754	354 aa		22.61	■■□□□ 1.21
RFK-204	ENST00000479197	BICC1	Q9H694	974 aa	Known RBP	22.61	■■□□□ 1.21
RFK-204	ENST00000479197	HDAC5	Q9UQL6	1122 aa		22.61	■■□□□ 1.21
RFK-204	ENST00000479197	LRRC37A	A6NMS7	1700 aa		22.61	■■□□□ 1.21
RFK-204	ENST00000479197	CHD4	Q14839	1912 aa		22.6	■■□□□ 1.21
RFK-204	ENST00000479197	ITGA6	P23229	1130 aa		22.6	■■□□□ 1.21
RFK-204	ENST00000479197	RPS8	P62241	208 aa	Known RBP	22.6	■■□□□ 1.21
RFK-204	ENST00000479197	CCDC93	Q567U6	631 aa		22.6	■■□□□ 1.21
RFK-204	ENST00000479197	OLFM4	Q6UX06	510 aa		22.6	■■□□□ 1.21
RFK-204	ENST00000479197	TMC4	Q7Z404	712 aa		22.6	■■□□□ 1.21
RFK-204	ENST00000479197	CDC5L	Q99459	802 aa	Known RBP	22.6	■■□□□ 1.21
RFK-204	ENST00000479197	CHMP3	Q9Y3E7	222 aa		22.6	■■□□□ 1.21
RFK-204	ENST00000479197	ATP6V0A2	Q9Y487	856 aa		22.6	■■□□□ 1.21
RFK-204	ENST00000479197	RABL6	Q3YEC7	729 aa	Predicted RBP	22.59	■■□□□ 1.21
RFK-204	ENST00000479197	CC2D2B	Q6DHV5	1058 aa		22.59	■■□□□ 1.21
RFK-204	ENST00000479197	ANKRD18A	Q8IVF6	992 aa		22.58	■■□□□ 1.21
RFK-204	ENST00000479197	ANKRD44	Q8N8A2	993 aa		22.58	■■□□□ 1.21
RFK-204	ENST00000479197	TMX4	Q9H1E5	349 aa	Predicted RBP	22.58	■■□□□ 1.21
RFK-204	ENST00000479197	SNED1	Q8TER0	1413 aa		22.58	■■□□□ 1.2
RFK-204	ENST00000479197	IFIT5	Q13325	482 aa	Known RBP	22.57	■■□□□ 1.2
RFK-204	ENST00000479197	PDE3A	Q14432	1141 aa		22.57	■■□□□ 1.2
RFK-204	ENST00000479197	SLC51A	Q86UW1	340 aa		22.57	■■□□□ 1.2
RFK-204	ENST00000479197	SP8	Q8IXZ3	490 aa		22.57	■■□□□ 1.2
RFK-204	ENST00000479197	RTKN2	Q8IZC4	609 aa		22.57	■■□□□ 1.2
RFK-204	ENST00000479197	LRRFIP2	Q9Y608	721 aa	Known RBP	22.57	■■□□□ 1.2
RFK-204	ENST00000479197	ANKRD18B	A2A2Z9	1011 aa		22.57	■■□□□ 1.2
RFK-204	ENST00000479197	RRP1	P56182	461 aa	Known RBP	22.57	■■□□□ 1.2
RFK-204	ENST00000479197	SBF1	O95248	1867 aa		22.56	■■□□□ 1.2
RFK-204	ENST00000479197	NFKBIE	O00221	500 aa		22.56	■■□□□ 1.2
RFK-204	ENST00000479197	CCDC57	Q2TAC2	916 aa		22.56	■■□□□ 1.2
RFK-204	ENST00000479197	GRIPAP1	Q4V328	841 aa		22.56	■■□□□ 1.2
RFK-204	ENST00000479197	IGHMBP2	P38935	993 aa	Known RBP	22.55	■■□□□ 1.2
RFK-204	ENST00000479197	RASSF7	Q02833	373 aa		22.55	■■□□□ 1.2
RFK-204	ENST00000479197	MVP	Q14764	893 aa	Known RBP	22.55	■■□□□ 1.2
RFK-204	ENST00000479197	C20orf194	Q5TEA3	1177 aa		22.55	■■□□□ 1.2
RFK-204	ENST00000479197	TAOK3	Q9H2K8	898 aa		22.55	■■□□□ 1.2
RFK-204	ENST00000479197	CCDC88A	Q3V6T2	1871 aa		22.55	■■□□□ 1.2
RFK-204	ENST00000479197	LTBP3	Q9NS15	1303 aa		22.54	■■□□□ 1.2
RFK-204	ENST00000479197	ZBTB7B	O15156	539 aa	Predicted RBP	22.54	■■□□□ 1.2
RFK-204	ENST00000479197	COG6	Q9Y2V7	657 aa		22.54	■■□□□ 1.2
RFK-204	ENST00000479197	GNAI2	P04899	355 aa		22.53	■■□□□ 1.2
RFK-204	ENST00000479197	BSDC1	Q9NW68	430 aa	Predicted RBP	22.53	■■□□□ 1.2
RFK-204	ENST00000479197	FKBP4	Q02790	459 aa	Known RBP eCLIP	22.52	■■□□□ 1.2
RFK-204	ENST00000479197	TAF7L	Q5H9L4	462 aa		22.52	■■□□□ 1.2
RFK-204	ENST00000479197	MPHOSPH8	Q99549	860 aa		22.52	■■□□□ 1.2
RFK-204	ENST00000479197	DDX19B	Q9UMR2	479 aa		22.52	■■□□□ 1.2
RFK-204	ENST00000479197	LTBP1	Q14766	1721 aa		22.52	■■□□□ 1.2
RFK-204	ENST00000479197	PSMD1	Q99460	953 aa		22.52	■■□□□ 1.19
RFK-204	ENST00000479197	DPP8	Q6V1X1	898 aa	Predicted RBP	22.51	■■□□□ 1.19
RFK-204	ENST00000479197	MPND	Q8N594	471 aa		22.51	■■□□□ 1.19
RFK-204	ENST00000479197	DICER1	Q9UPY3	1922 aa	Known RBP	22.5	■■□□□ 1.19
RFK-204	ENST00000479197	LMNB1	P20700	586 aa		22.5	■■□□□ 1.19
RFK-204	ENST00000479197	ZNF594	Q96JF6	807 aa	Predicted RBP	22.5	■■□□□ 1.19
RFK-204	ENST00000479197	DUOX1	Q9NRD9	1551 aa		22.49	■■□□□ 1.19
RFK-204	ENST00000479197	NSFL1C	Q9UNZ2	370 aa	Known RBP	22.49	■■□□□ 1.19
RFK-204	ENST00000479197	PRELP	P51888	382 aa		22.48	■■□□□ 1.19
RFK-204	ENST00000479197	GPSM2	P81274	684 aa		22.48	■■□□□ 1.19

Retrieved 100 of 20,778 RNA–protein pairs in 152.2 ms