RNA–Protein interactions for RNA: ENST00000478886.1

CMTM6-202, Transcript of CKLF like MARVEL transmembrane domain containing 6, humanhuman

TSL 2

Gene CMTM6, Length 803 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM6-202ENST00000478886 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.43□□□□□ -0.74
CMTM6-202ENST00000478886 DDX17Q92841 729 aaKnown RBP10.43□□□□□ -0.74
CMTM6-202ENST00000478886 TRPM3Q9HCF6 1732 aaPredicted RBP10.43□□□□□ -0.74
CMTM6-202ENST00000478886 PXDNQ92626 1479 aa10.42□□□□□ -0.74
CMTM6-202ENST00000478886 SBNO1A3KN83 1393 aa10.42□□□□□ -0.74
CMTM6-202ENST00000478886 TTC21BQ7Z4L5 1316 aa10.42□□□□□ -0.74
CMTM6-202ENST00000478886 WWC1Q8IX03 1113 aa10.42□□□□□ -0.74
CMTM6-202ENST00000478886 CYLDQ9NQC7 956 aa10.42□□□□□ -0.74
CMTM6-202ENST00000478886 TNS3Q68CZ2 1445 aa10.41□□□□□ -0.74
CMTM6-202ENST00000478886 NSD2O96028 1365 aa10.41□□□□□ -0.74
CMTM6-202ENST00000478886 SOS2Q07890 1332 aaPredicted RBP10.41□□□□□ -0.74
CMTM6-202ENST00000478886 LILRA1O75019 489 aa10.41□□□□□ -0.74
CMTM6-202ENST00000478886 SSH2Q76I76 1423 aa10.41□□□□□ -0.74
CMTM6-202ENST00000478886 ARHGEF10O15013 1369 aa10.4□□□□□ -0.74
CMTM6-202ENST00000478886 ABTB2Q8N961 1025 aa10.4□□□□□ -0.74
CMTM6-202ENST00000478886 CEP126Q9P2H0 1117 aa10.4□□□□□ -0.74
CMTM6-202ENST00000478886 ANKRD26Q9UPS8 1709 aa10.4□□□□□ -0.74
CMTM6-202ENST00000478886 PIK3C2AO00443 1686 aa10.4□□□□□ -0.74
CMTM6-202ENST00000478886 ALS2Q96Q42 1657 aa10.4□□□□□ -0.74
CMTM6-202ENST00000478886 ADH1AP07327 375 aa10.39□□□□□ -0.75
CMTM6-202ENST00000478886 SOX11P35716 441 aa10.39□□□□□ -0.75
CMTM6-202ENST00000478886 CNGB1Q14028 1251 aaPredicted RBP10.39□□□□□ -0.75
CMTM6-202ENST00000478886 NME9Q86XW9 330 aa10.39□□□□□ -0.75
CMTM6-202ENST00000478886 LRRC59Q96AG4 307 aaKnown RBP10.39□□□□□ -0.75
CMTM6-202ENST00000478886 ZNF775Q96BV0 537 aaPredicted RBP10.39□□□□□ -0.75
CMTM6-202ENST00000478886 COG3Q96JB2 828 aa10.39□□□□□ -0.75
CMTM6-202ENST00000478886 AGBL1Q96MI9 1066 aa10.39□□□□□ -0.75
CMTM6-202ENST00000478886 PCDHB11Q9Y5F2 797 aa10.39□□□□□ -0.75
CMTM6-202ENST00000478886 COL16A1Q07092 1604 aaPredicted RBP10.39□□□□□ -0.75
CMTM6-202ENST00000478886 NPC1L1Q9UHC9 1359 aa10.39□□□□□ -0.75
CMTM6-202ENST00000478886 SPATA31A3Q5VYP0 1347 aa10.38□□□□□ -0.75
CMTM6-202ENST00000478886 CC2D1BQ5T0F9 858 aaKnown RBP10.38□□□□□ -0.75
CMTM6-202ENST00000478886 NLRP13Q86W25 1043 aa10.38□□□□□ -0.75
CMTM6-202ENST00000478886 GGNBP2Q9H3C7 697 aa10.38□□□□□ -0.75
CMTM6-202ENST00000478886 FYB1O15117 783 aa10.37□□□□□ -0.75
CMTM6-202ENST00000478886 SPINT1O43278 529 aa10.37□□□□□ -0.75
CMTM6-202ENST00000478886 ANP32CO43423 234 aa10.37□□□□□ -0.75
CMTM6-202ENST00000478886 ERVK-9P63128 1117 aa10.37□□□□□ -0.75
CMTM6-202ENST00000478886 RELBQ01201 579 aa10.37□□□□□ -0.75
CMTM6-202ENST00000478886 NUTM2GQ5VZR2 741 aa10.37□□□□□ -0.75
CMTM6-202ENST00000478886 DIEXFQ68CQ4 756 aaKnown RBP10.37□□□□□ -0.75
CMTM6-202ENST00000478886 MORC1Q86VD1 984 aa10.37□□□□□ -0.75
CMTM6-202ENST00000478886 FBXO41Q8TF61 875 aa10.37□□□□□ -0.75
CMTM6-202ENST00000478886 USP54Q70EL1 1684 aa10.37□□□□□ -0.75
CMTM6-202ENST00000478886 USP31Q70CQ4 1352 aa10.37□□□□□ -0.75
CMTM6-202ENST00000478886 OVOS2A0A0J9YW53 1432 aa10.36□□□□□ -0.75
CMTM6-202ENST00000478886 OVOS2Q6IE36 1432 aa10.36□□□□□ -0.75
CMTM6-202ENST00000478886 MAN1A2O60476 641 aa10.36□□□□□ -0.75
CMTM6-202ENST00000478886 ADD1P35611 737 aaKnown RBP10.36□□□□□ -0.75
CMTM6-202ENST00000478886 SEMA3FQ13275 785 aa10.36□□□□□ -0.75
CMTM6-202ENST00000478886 CC2D2BQ6DHV5 1058 aa10.36□□□□□ -0.75
CMTM6-202ENST00000478886 MED1Q15648 1581 aaPredicted RBP10.35□□□□□ -0.75
CMTM6-202ENST00000478886 HSPA1LP34931 641 aa10.35□□□□□ -0.75
CMTM6-202ENST00000478886 SLFNL1Q499Z3 407 aa10.35□□□□□ -0.75
CMTM6-202ENST00000478886 PHRF1Q9P1Y6 1649 aaKnown RBP10.35□□□□□ -0.75
CMTM6-202ENST00000478886 JCADQ9P266 1359 aa10.35□□□□□ -0.75
CMTM6-202ENST00000478886 SHPRHQ149N8 1683 aa10.34□□□□□ -0.75
CMTM6-202ENST00000478886 COL22A1Q8NFW1 1626 aaPredicted RBP10.34□□□□□ -0.75
CMTM6-202ENST00000478886 MARF1Q9Y4F3 1742 aaKnown RBP10.34□□□□□ -0.75
CMTM6-202ENST00000478886 SOBPA7XYQ1 873 aa10.34□□□□□ -0.75
CMTM6-202ENST00000478886 RALBP1Q15311 655 aa10.34□□□□□ -0.75
CMTM6-202ENST00000478886 RNF135Q8IUD6 432 aa10.34□□□□□ -0.75
CMTM6-202ENST00000478886 KCNH5Q8NCM2 988 aa10.34□□□□□ -0.75
CMTM6-202ENST00000478886 CCDC85AQ96PX6 553 aaPredicted RBP10.34□□□□□ -0.75
CMTM6-202ENST00000478886 PNPLA6Q8IY17 1366 aa10.34□□□□□ -0.75
CMTM6-202ENST00000478886 USP19O94966 1318 aa10.33□□□□□ -0.76
CMTM6-202ENST00000478886 SLIT3O75094 1523 aa10.33□□□□□ -0.76
CMTM6-202ENST00000478886 TTLL8A6PVC2 850 aa10.33□□□□□ -0.76
CMTM6-202ENST00000478886 SCTRP47872 440 aa10.33□□□□□ -0.76
CMTM6-202ENST00000478886 ZNF395Q9H8N7 513 aaPredicted RBP10.33□□□□□ -0.76
CMTM6-202ENST00000478886 ABCA3Q99758 1704 aa10.33□□□□□ -0.76
CMTM6-202ENST00000478886 CRYBG1Q9Y4K1 1723 aa10.33□□□□□ -0.76
CMTM6-202ENST00000478886 PARD3Q8TEW0 1356 aa10.32□□□□□ -0.76
CMTM6-202ENST00000478886 ATP5J2-PTCD1G3V325 749 aa10.32□□□□□ -0.76
CMTM6-202ENST00000478886 PTGIRP43119 386 aa10.32□□□□□ -0.76
CMTM6-202ENST00000478886 TNNT2P45379 298 aaPredicted RBP10.32□□□□□ -0.76
CMTM6-202ENST00000478886 CYP2U1Q7Z449 544 aa10.32□□□□□ -0.76
CMTM6-202ENST00000478886 PHTF2Q8N3S3 785 aa10.32□□□□□ -0.76
CMTM6-202ENST00000478886 KDF1Q8NAX2 398 aaPredicted RBP10.32□□□□□ -0.76
CMTM6-202ENST00000478886 CLUAP1Q96AJ1 413 aa10.32□□□□□ -0.76
CMTM6-202ENST00000478886 INSM2Q96T92 566 aaPredicted RBP10.32□□□□□ -0.76
CMTM6-202ENST00000478886 DNMT3LQ9UJW3 386 aa10.32□□□□□ -0.76
CMTM6-202ENST00000478886 DOLKQ9UPQ8 538 aa10.32□□□□□ -0.76
CMTM6-202ENST00000478886 MYCP01106 439 aaPredicted RBP10.31□□□□□ -0.76
CMTM6-202ENST00000478886 PRKRIP1Q9H875 184 aaPredicted RBP10.31□□□□□ -0.76
CMTM6-202ENST00000478886 POLMQ9NP87 494 aaPredicted RBP10.31□□□□□ -0.76
CMTM6-202ENST00000478886 SPATA31A6Q5VVP1 1343 aa10.31□□□□□ -0.76
CMTM6-202ENST00000478886 MYBBP1AQ9BQG0 1328 aaKnown RBP10.31□□□□□ -0.76
CMTM6-202ENST00000478886 AATKQ6ZMQ8 1374 aa10.3□□□□□ -0.76
CMTM6-202ENST00000478886 NFAT5O94916 1531 aa10.3□□□□□ -0.76
CMTM6-202ENST00000478886 ZBTB7CA1YPR0 619 aa10.3□□□□□ -0.76
CMTM6-202ENST00000478886 GCP02774 474 aa10.3□□□□□ -0.76
CMTM6-202ENST00000478886 CTSOP43234 321 aaPredicted RBP10.3□□□□□ -0.76
CMTM6-202ENST00000478886 CDCA7Q9BWT1 371 aaPredicted RBP10.3□□□□□ -0.76
CMTM6-202ENST00000478886 LTN1O94822 1766 aa10.29□□□□□ -0.76
CMTM6-202ENST00000478886 POM121CA8CG34 1229 aa10.29□□□□□ -0.76
CMTM6-202ENST00000478886 TERTO14746 1132 aaKnown RBP10.29□□□□□ -0.76
CMTM6-202ENST00000478886 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.29□□□□□ -0.76
CMTM6-202ENST00000478886 OSBPL3Q9H4L5 887 aa10.29□□□□□ -0.76
CMTM6-202ENST00000478886 ALG2Q9H553 416 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms