RNA–Protein interactions for RNA: ENST00000478693.1

SRRT-211, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-211ENST00000478693 SF3B3Q15393 1217 aaKnown RBP14.32□□□□□ -0.12
SRRT-211ENST00000478693 ITPRIPQ8IWB1 547 aa14.32□□□□□ -0.12
SRRT-211ENST00000478693 PLIN1O60240 522 aa14.31□□□□□ -0.12
SRRT-211ENST00000478693 NBPF7P0C2Y1 421 aaPredicted RBP14.31□□□□□ -0.12
SRRT-211ENST00000478693 CASP7P55210 303 aa14.31□□□□□ -0.12
SRRT-211ENST00000478693 GRAPQ13588 217 aa14.31□□□□□ -0.12
SRRT-211ENST00000478693 INTS3Q68E01 1043 aaKnown RBP14.31□□□□□ -0.12
SRRT-211ENST00000478693 TMEM57Q8N5G2 664 aa14.31□□□□□ -0.12
SRRT-211ENST00000478693 GRAPLQ8TC17 118 aaPredicted RBP14.31□□□□□ -0.12
SRRT-211ENST00000478693 SUCLG2Q96I99 432 aa14.31□□□□□ -0.12
SRRT-211ENST00000478693 CRAMP1Q96RY5 1269 aa14.31□□□□□ -0.12
SRRT-211ENST00000478693 BRCA1P38398 1863 aaKnown RBP14.3□□□□□ -0.12
SRRT-211ENST00000478693 CACNA1SQ13698 1873 aa14.3□□□□□ -0.12
SRRT-211ENST00000478693 HOXA10P31260 410 aaPredicted RBP14.3□□□□□ -0.12
SRRT-211ENST00000478693 SOGA3Q5TF21 947 aa14.3□□□□□ -0.12
SRRT-211ENST00000478693 ARHGAP27Q6ZUM4 889 aa14.3□□□□□ -0.12
SRRT-211ENST00000478693 PLA2G12BQ9BX93 195 aa14.3□□□□□ -0.12
SRRT-211ENST00000478693 HDAC5Q9UQL6 1122 aa14.3□□□□□ -0.12
SRRT-211ENST00000478693 GNAI3P08754 354 aa14.29□□□□□ -0.12
SRRT-211ENST00000478693 FAM161AQ3B820 660 aa14.29□□□□□ -0.12
SRRT-211ENST00000478693 CCDC93Q567U6 631 aa14.29□□□□□ -0.12
SRRT-211ENST00000478693 TAF7LQ5H9L4 462 aa14.29□□□□□ -0.12
SRRT-211ENST00000478693 ANKRD18AQ8IVF6 992 aa14.29□□□□□ -0.12
SRRT-211ENST00000478693 TTLL11Q8NHH1 800 aa14.29□□□□□ -0.12
SRRT-211ENST00000478693 CDC5LQ99459 802 aaKnown RBP14.29□□□□□ -0.12
SRRT-211ENST00000478693 GREM2Q9H772 168 aa14.29□□□□□ -0.12
SRRT-211ENST00000478693 UTYO14607 1347 aa14.28□□□□□ -0.12
SRRT-211ENST00000478693 LMBR1LQ6UX01 489 aa14.28□□□□□ -0.12
SRRT-211ENST00000478693 PANK1Q8TE04 598 aa14.28□□□□□ -0.12
SRRT-211ENST00000478693 MEIS3Q99687 375 aa14.28□□□□□ -0.12
SRRT-211ENST00000478693 USP44Q9H0E7 712 aa14.28□□□□□ -0.12
SRRT-211ENST00000478693 SEC31BQ9NQW1 1179 aa14.28□□□□□ -0.12
SRRT-211ENST00000478693 ANKRD18BA2A2Z9 1011 aa14.27□□□□□ -0.13
SRRT-211ENST00000478693 BBOX1O75936 387 aa14.27□□□□□ -0.13
SRRT-211ENST00000478693 RLBP1P12271 317 aa14.27□□□□□ -0.13
SRRT-211ENST00000478693 ITGA6P23229 1130 aa14.27□□□□□ -0.13
SRRT-211ENST00000478693 IGHMBP2P38935 993 aaKnown RBP14.27□□□□□ -0.13
SRRT-211ENST00000478693 IFIT5Q13325 482 aaKnown RBP14.27□□□□□ -0.13
SRRT-211ENST00000478693 TMC4Q7Z404 712 aa14.27□□□□□ -0.13
SRRT-211ENST00000478693 CELF1Q92879 486 aaKnown RBP14.27□□□□□ -0.13
SRRT-211ENST00000478693 BICC1Q9H694 974 aaKnown RBP14.27□□□□□ -0.13
SRRT-211ENST00000478693 RRP1P56182 461 aaKnown RBP14.26□□□□□ -0.13
SRRT-211ENST00000478693 FOXO4P98177 505 aa14.26□□□□□ -0.13
SRRT-211ENST00000478693 RASSF7Q02833 373 aa14.26□□□□□ -0.13
SRRT-211ENST00000478693 CCDC57Q2TAC2 916 aa14.26□□□□□ -0.13
SRRT-211ENST00000478693 EPHA10Q5JZY3 1008 aa14.26□□□□□ -0.13
SRRT-211ENST00000478693 MPHOSPH8Q99549 860 aa14.26□□□□□ -0.13
SRRT-211ENST00000478693 LRRFIP2Q9Y608 721 aaKnown RBP14.26□□□□□ -0.13
SRRT-211ENST00000478693 ARFGEF1Q9Y6D6 1849 aa14.26□□□□□ -0.13
SRRT-211ENST00000478693 RTL9Q8NET4 1388 aa14.25□□□□□ -0.13
SRRT-211ENST00000478693 SLX4Q8IY92 1834 aa14.25□□□□□ -0.13
SRRT-211ENST00000478693 CSF1RP07333 972 aa14.25□□□□□ -0.13
SRRT-211ENST00000478693 RPS8P62241 208 aaKnown RBP14.25□□□□□ -0.13
SRRT-211ENST00000478693 CC2D2BQ6DHV5 1058 aa14.25□□□□□ -0.13
SRRT-211ENST00000478693 OLFM4Q6UX06 510 aa14.25□□□□□ -0.13
SRRT-211ENST00000478693 RTKN2Q8IZC4 609 aa14.25□□□□□ -0.13
SRRT-211ENST00000478693 TAOK3Q9H2K8 898 aa14.25□□□□□ -0.13
SRRT-211ENST00000478693 COG6Q9Y2V7 657 aa14.25□□□□□ -0.13
SRRT-211ENST00000478693 ATP6V0A2Q9Y487 856 aa14.25□□□□□ -0.13
SRRT-211ENST00000478693 MYH3P11055 1940 aa14.25□□□□□ -0.13
SRRT-211ENST00000478693 MVPQ14764 893 aaKnown RBP14.24□□□□□ -0.13
SRRT-211ENST00000478693 GNAI2P04899 355 aa14.23□□□□□ -0.13
SRRT-211ENST00000478693 DPP8Q6V1X1 898 aaPredicted RBP14.23□□□□□ -0.13
SRRT-211ENST00000478693 SLC51AQ86UW1 340 aa14.23□□□□□ -0.13
SRRT-211ENST00000478693 SP8Q8IXZ3 490 aa14.23□□□□□ -0.13
SRRT-211ENST00000478693 ANKRD44Q8N8A2 993 aa14.23□□□□□ -0.13
SRRT-211ENST00000478693 KAZALD1Q96I82 304 aa14.23□□□□□ -0.13
SRRT-211ENST00000478693 CHMP4BQ9H444 224 aaKnown RBP14.23□□□□□ -0.13
SRRT-211ENST00000478693 DDX19BQ9UMR2 479 aa14.23□□□□□ -0.13
SRRT-211ENST00000478693 COL4A1P02462 1669 aa14.23□□□□□ -0.13
SRRT-211ENST00000478693 NFKBIEO00221 500 aa14.22□□□□□ -0.13
SRRT-211ENST00000478693 FKBP4Q02790 459 aaKnown RBP eCLIP14.22□□□□□ -0.13
SRRT-211ENST00000478693 PDE3AQ14432 1141 aa14.22□□□□□ -0.13
SRRT-211ENST00000478693 RABL6Q3YEC7 729 aaPredicted RBP14.22□□□□□ -0.13
SRRT-211ENST00000478693 GRIPAP1Q4V328 841 aa14.22□□□□□ -0.13
SRRT-211ENST00000478693 C20orf194Q5TEA3 1177 aa14.22□□□□□ -0.13
SRRT-211ENST00000478693 MPNDQ8N594 471 aa14.22□□□□□ -0.13
SRRT-211ENST00000478693 C7orf43Q8WVR3 580 aa14.22□□□□□ -0.13
SRRT-211ENST00000478693 C1orf115Q9H7X2 142 aa14.22□□□□□ -0.13
SRRT-211ENST00000478693 CNNM1Q9NRU3 951 aa14.22□□□□□ -0.13
SRRT-211ENST00000478693 RNF181Q9P0P0 153 aa14.22□□□□□ -0.13
SRRT-211ENST00000478693 ANKIB1Q9P2G1 1089 aa14.22□□□□□ -0.13
SRRT-211ENST00000478693 NSFL1CQ9UNZ2 370 aaKnown RBP14.22□□□□□ -0.13
SRRT-211ENST00000478693 SUPT20HQ8NEM7 779 aa14.21□□□□□ -0.13
SRRT-211ENST00000478693 ZNF594Q96JF6 807 aaPredicted RBP14.21□□□□□ -0.13
SRRT-211ENST00000478693 BSDC1Q9NW68 430 aaPredicted RBP14.21□□□□□ -0.13
SRRT-211ENST00000478693 C6orf229H3BNL8 230 aa14.2□□□□□ -0.14
SRRT-211ENST00000478693 LMNB1P20700 586 aa14.2□□□□□ -0.14
SRRT-211ENST00000478693 GPSM2P81274 684 aa14.2□□□□□ -0.14
SRRT-211ENST00000478693 C9orf131Q5VYM1 1079 aa14.2□□□□□ -0.14
SRRT-211ENST00000478693 LDHAL6AQ6ZMR3 332 aa14.2□□□□□ -0.14
SRRT-211ENST00000478693 ZNF277Q9NRM2 450 aaPredicted RBP14.2□□□□□ -0.14
SRRT-211ENST00000478693 LRRC37AA6NMS7 1700 aa14.2□□□□□ -0.14
SRRT-211ENST00000478693 SPEF2Q9C093 1822 aa14.2□□□□□ -0.14
SRRT-211ENST00000478693 LTBP3Q9NS15 1303 aa14.19□□□□□ -0.14
SRRT-211ENST00000478693 TAF1P21675 1872 aa14.19□□□□□ -0.14
SRRT-211ENST00000478693 ZBTB7BO15156 539 aaPredicted RBP14.19□□□□□ -0.14
SRRT-211ENST00000478693 SRGAP3O43295 1099 aa14.19□□□□□ -0.14
SRRT-211ENST00000478693 UFL1O94874 794 aa14.19□□□□□ -0.14
SRRT-211ENST00000478693 KCNJ4P48050 445 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms