RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 ALDH1B1P30837 517 aa8.73□□□□□ -1.01
BRCA1-215ENST00000478531 DDX46Q7L014 1031 aaKnown RBP8.73□□□□□ -1.01
BRCA1-215ENST00000478531 SLC51AQ86UW1 340 aa8.73□□□□□ -1.01
BRCA1-215ENST00000478531 CDHR2Q9BYE9 1310 aa8.73□□□□□ -1.01
BRCA1-215ENST00000478531 PPEF1O14829 653 aaPredicted RBP8.73□□□□□ -1.01
BRCA1-215ENST00000478531 ZBTB22O15209 634 aa8.73□□□□□ -1.01
BRCA1-215ENST00000478531 PDE8AO60658 829 aa8.73□□□□□ -1.01
BRCA1-215ENST00000478531 HSP90B1P14625 803 aaKnown RBP8.73□□□□□ -1.01
BRCA1-215ENST00000478531 YY1P25490 414 aa8.73□□□□□ -1.01
BRCA1-215ENST00000478531 C9orf78Q9NZ63 289 aaPredicted RBP8.73□□□□□ -1.01
BRCA1-215ENST00000478531 DICER1Q9UPY3 1922 aaKnown RBP8.72□□□□□ -1.01
BRCA1-215ENST00000478531 LRRC37AA6NMS7 1700 aa8.72□□□□□ -1.01
BRCA1-215ENST00000478531 HOXA10P31260 410 aaPredicted RBP8.72□□□□□ -1.01
BRCA1-215ENST00000478531 CTSWP56202 376 aa8.72□□□□□ -1.01
BRCA1-215ENST00000478531 CRAMP1Q96RY5 1269 aa8.72□□□□□ -1.01
BRCA1-215ENST00000478531 H7C1W4 665 aa8.72□□□□□ -1.01
BRCA1-215ENST00000478531 GRM8O00222 908 aa8.72□□□□□ -1.01
BRCA1-215ENST00000478531 ALDH1L1O75891 902 aa8.72□□□□□ -1.01
BRCA1-215ENST00000478531 BRPF1P55201 1214 aaPredicted RBP8.72□□□□□ -1.01
BRCA1-215ENST00000478531 CCDC152Q4G0S7 254 aa8.72□□□□□ -1.01
BRCA1-215ENST00000478531 CCDC93Q567U6 631 aa8.72□□□□□ -1.01
BRCA1-215ENST00000478531 API5Q9BZZ5 524 aaKnown RBP8.72□□□□□ -1.01
BRCA1-215ENST00000478531 NFKBIEO00221 500 aa8.71□□□□□ -1.02
BRCA1-215ENST00000478531 GRAPQ13588 217 aa8.71□□□□□ -1.02
BRCA1-215ENST00000478531 SF3B3Q15393 1217 aaKnown RBP8.71□□□□□ -1.02
BRCA1-215ENST00000478531 SOGA3Q5TF21 947 aa8.71□□□□□ -1.02
BRCA1-215ENST00000478531 GRAPLQ8TC17 118 aaPredicted RBP8.71□□□□□ -1.02
BRCA1-215ENST00000478531 CELF1Q92879 486 aaKnown RBP8.71□□□□□ -1.02
BRCA1-215ENST00000478531 CLUAP1Q96AJ1 413 aa8.71□□□□□ -1.02
BRCA1-215ENST00000478531 SEC31BQ9NQW1 1179 aa8.71□□□□□ -1.02
BRCA1-215ENST00000478531 TNNQ9UQP3 1299 aa8.71□□□□□ -1.02
BRCA1-215ENST00000478531 CHMP3Q9Y3E7 222 aa8.71□□□□□ -1.02
BRCA1-215ENST00000478531 IPO8O15397 1037 aaKnown RBP8.7□□□□□ -1.02
BRCA1-215ENST00000478531 TRIM27P14373 513 aa8.7□□□□□ -1.02
BRCA1-215ENST00000478531 CASP7P55210 303 aa8.7□□□□□ -1.02
BRCA1-215ENST00000478531 C7orf43Q8WVR3 580 aa8.7□□□□□ -1.02
BRCA1-215ENST00000478531 TMX4Q9H1E5 349 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-215ENST00000478531 TAOK3Q9H2K8 898 aa8.7□□□□□ -1.02
BRCA1-215ENST00000478531 GREM2Q9H772 168 aa8.7□□□□□ -1.02
BRCA1-215ENST00000478531 RNF181Q9P0P0 153 aa8.7□□□□□ -1.02
BRCA1-215ENST00000478531 NBPF7P0C2Y1 421 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-215ENST00000478531 CCT4P50991 539 aaKnown RBP8.7□□□□□ -1.02
BRCA1-215ENST00000478531 FAM161AQ3B820 660 aa8.7□□□□□ -1.02
BRCA1-215ENST00000478531 C9orf131Q5VYM1 1079 aa8.7□□□□□ -1.02
BRCA1-215ENST00000478531 ATF7IPQ6VMQ6 1270 aa8.7□□□□□ -1.02
BRCA1-215ENST00000478531 FTSJ3Q8IY81 847 aaKnown RBP8.7□□□□□ -1.02
BRCA1-215ENST00000478531 TTLL11Q8NHH1 800 aa8.7□□□□□ -1.02
BRCA1-215ENST00000478531 A0A1B0GUL6 1792 aa8.69□□□□□ -1.02
BRCA1-215ENST00000478531 ZKSCAN2Q63HK3 967 aa8.69□□□□□ -1.02
BRCA1-215ENST00000478531 RTKN2Q8IZC4 609 aa8.69□□□□□ -1.02
BRCA1-215ENST00000478531 ARHGAP45Q92619 1136 aa8.69□□□□□ -1.02
BRCA1-215ENST00000478531 SUCLG2Q96I99 432 aa8.69□□□□□ -1.02
BRCA1-215ENST00000478531 ATP6V0A2Q9Y487 856 aa8.69□□□□□ -1.02
BRCA1-215ENST00000478531 LTBP1Q14766 1721 aa8.68□□□□□ -1.02
BRCA1-215ENST00000478531 BBOX1O75936 387 aa8.68□□□□□ -1.02
BRCA1-215ENST00000478531 LMNB1P20700 586 aa8.68□□□□□ -1.02
BRCA1-215ENST00000478531 PRELPP51888 382 aa8.68□□□□□ -1.02
BRCA1-215ENST00000478531 FKBP4Q02790 459 aaKnown RBP eCLIP8.68□□□□□ -1.02
BRCA1-215ENST00000478531 EPHA10Q5JZY3 1008 aa8.68□□□□□ -1.02
BRCA1-215ENST00000478531 ANKRD18AQ8IVF6 992 aa8.68□□□□□ -1.02
BRCA1-215ENST00000478531 ZNF526Q8TF50 670 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-215ENST00000478531 CDC5LQ99459 802 aaKnown RBP8.68□□□□□ -1.02
BRCA1-215ENST00000478531 PLA2G12BQ9BX93 195 aa8.68□□□□□ -1.02
BRCA1-215ENST00000478531 ZNF277Q9NRM2 450 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-215ENST00000478531 RCAN3Q9UKA8 241 aa8.68□□□□□ -1.02
BRCA1-215ENST00000478531 SNED1Q8TER0 1413 aa8.68□□□□□ -1.02
BRCA1-215ENST00000478531 DUOX1Q9NRD9 1551 aa8.68□□□□□ -1.02
BRCA1-215ENST00000478531 ITGA6P23229 1130 aa8.68□□□□□ -1.02
BRCA1-215ENST00000478531 RPS8P62241 208 aaKnown RBP8.68□□□□□ -1.02
BRCA1-215ENST00000478531 FOXO4P98177 505 aa8.68□□□□□ -1.02
BRCA1-215ENST00000478531 LMBR1LQ6UX01 489 aa8.68□□□□□ -1.02
BRCA1-215ENST00000478531 DPP8Q6V1X1 898 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-215ENST00000478531 USP44Q9H0E7 712 aa8.68□□□□□ -1.02
BRCA1-215ENST00000478531 BICC1Q9H694 974 aaKnown RBP8.68□□□□□ -1.02
BRCA1-215ENST00000478531 RTL9Q8NET4 1388 aa8.67□□□□□ -1.02
BRCA1-215ENST00000478531 LTBP3Q9NS15 1303 aa8.67□□□□□ -1.02
BRCA1-215ENST00000478531 UBTFL1P0CB47 393 aaPredicted RBP8.67□□□□□ -1.02
BRCA1-215ENST00000478531 CC2D2BQ6DHV5 1058 aa8.67□□□□□ -1.02
BRCA1-215ENST00000478531 TMC4Q7Z404 712 aa8.67□□□□□ -1.02
BRCA1-215ENST00000478531 SP8Q8IXZ3 490 aa8.67□□□□□ -1.02
BRCA1-215ENST00000478531 UTYO14607 1347 aa8.67□□□□□ -1.02
BRCA1-215ENST00000478531 ANKRD18BA2A2Z9 1011 aa8.66□□□□□ -1.02
BRCA1-215ENST00000478531 PLIN1O60240 522 aa8.66□□□□□ -1.02
BRCA1-215ENST00000478531 CSF1RP07333 972 aa8.66□□□□□ -1.02
BRCA1-215ENST00000478531 IGHMBP2P38935 993 aaKnown RBP8.66□□□□□ -1.02
BRCA1-215ENST00000478531 IFIT5Q13325 482 aaKnown RBP8.66□□□□□ -1.02
BRCA1-215ENST00000478531 TAF7LQ5H9L4 462 aa8.66□□□□□ -1.02
BRCA1-215ENST00000478531 INTS3Q68E01 1043 aaKnown RBP8.66□□□□□ -1.02
BRCA1-215ENST00000478531 ITPRIPQ8IWB1 547 aa8.66□□□□□ -1.02
BRCA1-215ENST00000478531 DZIP1LQ8IYY4 767 aaKnown RBP8.66□□□□□ -1.02
BRCA1-215ENST00000478531 MPNDQ8N594 471 aa8.66□□□□□ -1.02
BRCA1-215ENST00000478531 TMEM57Q8N5G2 664 aa8.66□□□□□ -1.02
BRCA1-215ENST00000478531 KAZALD1Q96I82 304 aa8.66□□□□□ -1.02
BRCA1-215ENST00000478531 PSMD1Q99460 953 aa8.66□□□□□ -1.02
BRCA1-215ENST00000478531 MEIS3Q99687 375 aa8.66□□□□□ -1.02
BRCA1-215ENST00000478531 ANKIB1Q9P2G1 1089 aa8.66□□□□□ -1.02
BRCA1-215ENST00000478531 NSFL1CQ9UNZ2 370 aaKnown RBP8.66□□□□□ -1.02
BRCA1-215ENST00000478531 COL4A5P29400 1685 aa8.66□□□□□ -1.02
BRCA1-215ENST00000478531 RLBP1P12271 317 aa8.66□□□□□ -1.02
BRCA1-215ENST00000478531 PRKCSHP14314 528 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms