RNA–Protein interactions for RNA: ENST00000478452.1

MMS19-215, Transcript of MMS19 homolog, cytosolic iron-sulfur assembly component, human

TSL 2

Gene MMS19, Length 835 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MMS19-215	ENST00000478452	GRM1	Q13255	1194 aa		11.44	□□□□□ -0.58
MMS19-215	ENST00000478452	WDR43	Q15061	677 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
MMS19-215	ENST00000478452	KRT24	Q2M2I5	525 aa		11.44	□□□□□ -0.58
MMS19-215	ENST00000478452	CYP4F22	Q6NT55	531 aa		11.44	□□□□□ -0.58
MMS19-215	ENST00000478452	TMC4	Q7Z404	712 aa		11.44	□□□□□ -0.58
MMS19-215	ENST00000478452	PLBD2	Q8NHP8	589 aa		11.44	□□□□□ -0.58
MMS19-215	ENST00000478452	ZNF428	Q96B54	188 aa		11.44	□□□□□ -0.58
MMS19-215	ENST00000478452	CAPNS2	Q96L46	248 aa		11.44	□□□□□ -0.58
MMS19-215	ENST00000478452	CHPF2	Q9P2E5	772 aa		11.44	□□□□□ -0.58
MMS19-215	ENST00000478452	DBF4	Q9UBU7	674 aa	Predicted RBP	11.44	□□□□□ -0.58
MMS19-215	ENST00000478452	TRIM35	Q9UPQ4	493 aa		11.44	□□□□□ -0.58
MMS19-215	ENST00000478452	BCOR	Q6W2J9	1755 aa		11.44	□□□□□ -0.58
MMS19-215	ENST00000478452		H7C1D1	291 aa		11.43	□□□□□ -0.58
MMS19-215	ENST00000478452	CELF2	O95319	508 aa	Known RBP	11.43	□□□□□ -0.58
MMS19-215	ENST00000478452	HSPA8	P11142	646 aa	Known RBP	11.43	□□□□□ -0.58
MMS19-215	ENST00000478452	WASHC4	Q2M389	1173 aa		11.43	□□□□□ -0.58
MMS19-215	ENST00000478452	HDGFL1	Q5TGJ6	251 aa		11.43	□□□□□ -0.58
MMS19-215	ENST00000478452	ZC3H15	Q8WU90	426 aa	Known RBP	11.43	□□□□□ -0.58
MMS19-215	ENST00000478452	FAM89A	Q96GI7	184 aa		11.43	□□□□□ -0.58
MMS19-215	ENST00000478452	PGAP2	Q9UHJ9	254 aa		11.43	□□□□□ -0.58
MMS19-215	ENST00000478452	CNOT7	Q9UIV1	285 aa	Known RBP	11.43	□□□□□ -0.58
MMS19-215	ENST00000478452	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.43	□□□□□ -0.58
MMS19-215	ENST00000478452	ADAMTS8	Q9UP79	889 aa		11.43	□□□□□ -0.58
MMS19-215	ENST00000478452	TLL2	Q9Y6L7	1015 aa		11.43	□□□□□ -0.58
MMS19-215	ENST00000478452	DICER1	Q9UPY3	1922 aa	Known RBP	11.43	□□□□□ -0.58
MMS19-215	ENST00000478452	MYBBP1A	Q9BQG0	1328 aa	Known RBP	11.42	□□□□□ -0.58
MMS19-215	ENST00000478452	ATP5J2-PTCD1	G3V325	749 aa		11.42	□□□□□ -0.58
MMS19-215	ENST00000478452	HOXB7	P09629	217 aa		11.42	□□□□□ -0.58
MMS19-215	ENST00000478452	MAP2K2	P36507	400 aa		11.42	□□□□□ -0.58
MMS19-215	ENST00000478452	SF3B3	Q15393	1217 aa	Known RBP	11.42	□□□□□ -0.58
MMS19-215	ENST00000478452	CDC37L1	Q7L3B6	337 aa		11.42	□□□□□ -0.58
MMS19-215	ENST00000478452	CFAP44	Q96MT7	982 aa		11.42	□□□□□ -0.58
MMS19-215	ENST00000478452	HYPK	Q9NX55	129 aa		11.42	□□□□□ -0.58
MMS19-215	ENST00000478452	SCN4A	P35499	1836 aa		11.42	□□□□□ -0.58
MMS19-215	ENST00000478452	C6orf229	H3BNL8	230 aa		11.41	□□□□□ -0.58
MMS19-215	ENST00000478452	RIMBP2	O15034	1052 aa		11.41	□□□□□ -0.58
MMS19-215	ENST00000478452	HIRA	P54198	1017 aa	Predicted RBP	11.41	□□□□□ -0.58
MMS19-215	ENST00000478452	RTL5	Q5HYW3	569 aa	Predicted RBP	11.41	□□□□□ -0.58
MMS19-215	ENST00000478452	SAPCD2	Q86UD0	394 aa		11.41	□□□□□ -0.58
MMS19-215	ENST00000478452	ISCA1	Q9BUE6	129 aa		11.41	□□□□□ -0.58
MMS19-215	ENST00000478452	GLIS2	Q9BZE0	524 aa	Predicted RBP	11.41	□□□□□ -0.58
MMS19-215	ENST00000478452	COL4A5	P29400	1685 aa		11.4	□□□□□ -0.58
MMS19-215	ENST00000478452	YDJC	A8MPS7	323 aa		11.4	□□□□□ -0.58
MMS19-215	ENST00000478452	RPS8	P62241	208 aa	Known RBP	11.4	□□□□□ -0.58
MMS19-215	ENST00000478452	TRIM28	Q13263	835 aa	Known RBP	11.4	□□□□□ -0.58
MMS19-215	ENST00000478452	DUSP27	Q5VZP5	1158 aa		11.4	□□□□□ -0.58
MMS19-215	ENST00000478452	RIC3	Q7Z5B4	369 aa		11.4	□□□□□ -0.58
MMS19-215	ENST00000478452	DPF2	Q92785	391 aa		11.4	□□□□□ -0.58
MMS19-215	ENST00000478452	CELF1	Q92879	486 aa	Known RBP	11.4	□□□□□ -0.58
MMS19-215	ENST00000478452	HHIPL1	Q96JK4	782 aa		11.4	□□□□□ -0.58
MMS19-215	ENST00000478452	ZNF408	Q9H9D4	720 aa		11.4	□□□□□ -0.58
MMS19-215	ENST00000478452	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.4	□□□□□ -0.58
MMS19-215	ENST00000478452	CDHR2	Q9BYE9	1310 aa		11.39	□□□□□ -0.59
MMS19-215	ENST00000478452	IRS4	O14654	1257 aa	Predicted RBP	11.39	□□□□□ -0.59
MMS19-215	ENST00000478452	AOC2	O75106	756 aa		11.39	□□□□□ -0.59
MMS19-215	ENST00000478452	HSP90B1	P14625	803 aa	Known RBP	11.39	□□□□□ -0.59
MMS19-215	ENST00000478452	GPSM2	P81274	684 aa		11.39	□□□□□ -0.59
MMS19-215	ENST00000478452	USP48	Q86UV5	1035 aa		11.39	□□□□□ -0.59
MMS19-215	ENST00000478452	MICALL2	Q8IY33	904 aa		11.39	□□□□□ -0.59
MMS19-215	ENST00000478452	EYA3	Q99504	573 aa		11.39	□□□□□ -0.59
MMS19-215	ENST00000478452	ZC3H12C	Q9C0D7	883 aa	Known RBP	11.39	□□□□□ -0.59
MMS19-215	ENST00000478452	POLL	Q9UGP5	575 aa		11.39	□□□□□ -0.59
MMS19-215	ENST00000478452		G3V3G9	751 aa		11.38	□□□□□ -0.59
MMS19-215	ENST00000478452	PSMD14	O00487	310 aa		11.38	□□□□□ -0.59
MMS19-215	ENST00000478452	RBM26	Q5T8P6	1007 aa	Known RBP	11.38	□□□□□ -0.59
MMS19-215	ENST00000478452	DCAF8	Q5TAQ9	597 aa		11.38	□□□□□ -0.59
MMS19-215	ENST00000478452	SAMD7	Q7Z3H4	446 aa		11.38	□□□□□ -0.59
MMS19-215	ENST00000478452	TRPM4	Q8TD43	1214 aa		11.38	□□□□□ -0.59
MMS19-215	ENST00000478452	ABHD8	Q96I13	439 aa		11.38	□□□□□ -0.59
MMS19-215	ENST00000478452	DBNDD1	Q9H9R9	158 aa		11.38	□□□□□ -0.59
MMS19-215	ENST00000478452	MBIP	Q9NS73	344 aa		11.38	□□□□□ -0.59
MMS19-215	ENST00000478452	ARFGEF2	Q9Y6D5	1785 aa		11.38	□□□□□ -0.59
MMS19-215	ENST00000478452	SHTN1	A0MZ66	631 aa		11.37	□□□□□ -0.59
MMS19-215	ENST00000478452	ELL2	O00472	640 aa	Predicted RBP	11.37	□□□□□ -0.59
MMS19-215	ENST00000478452	CA12	O43570	354 aa		11.37	□□□□□ -0.59
MMS19-215	ENST00000478452	CALD1	Q05682	793 aa	Known RBP	11.37	□□□□□ -0.59
MMS19-215	ENST00000478452	GOLGA2	Q08379	1002 aa		11.37	□□□□□ -0.59
MMS19-215	ENST00000478452	DOK7	Q18PE1	504 aa		11.37	□□□□□ -0.59
MMS19-215	ENST00000478452	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.37	□□□□□ -0.59
MMS19-215	ENST00000478452	TBC1D16	Q8TBP0	767 aa		11.37	□□□□□ -0.59
MMS19-215	ENST00000478452	DCPS	Q96C86	337 aa	Known RBP	11.37	□□□□□ -0.59
MMS19-215	ENST00000478452	CHMP4A	Q9BY43	222 aa		11.37	□□□□□ -0.59
MMS19-215	ENST00000478452	KCNQ5	Q9NR82	932 aa		11.37	□□□□□ -0.59
MMS19-215	ENST00000478452	ECE2	O60344	883 aa		11.36	□□□□□ -0.59
MMS19-215	ENST00000478452	ZNF853	P0CG23	659 aa		11.36	□□□□□ -0.59
MMS19-215	ENST00000478452	RPS12	P25398	132 aa	Known RBP	11.36	□□□□□ -0.59
MMS19-215	ENST00000478452	GNAI1	P63096	354 aa		11.36	□□□□□ -0.59
MMS19-215	ENST00000478452	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	11.36	□□□□□ -0.59
MMS19-215	ENST00000478452	KRT26	Q7Z3Y9	468 aa		11.36	□□□□□ -0.59
MMS19-215	ENST00000478452	PHAX	Q9H814	394 aa	Known RBP	11.36	□□□□□ -0.59
MMS19-215	ENST00000478452	ANKIB1	Q9P2G1	1089 aa		11.36	□□□□□ -0.59
MMS19-215	ENST00000478452	TSKS	Q9UJT2	592 aa		11.36	□□□□□ -0.59
MMS19-215	ENST00000478452	KDM3B	Q7LBC6	1761 aa		11.36	□□□□□ -0.59
MMS19-215	ENST00000478452	NUP98	P52948	1817 aa		11.35	□□□□□ -0.59
MMS19-215	ENST00000478452	CCDC85C	A6NKD9	419 aa		11.35	□□□□□ -0.59
MMS19-215	ENST00000478452	APAF1	O14727	1248 aa		11.35	□□□□□ -0.59
MMS19-215	ENST00000478452	VIL1	P09327	827 aa	Known RBP	11.35	□□□□□ -0.59
MMS19-215	ENST00000478452	BRPF1	P55201	1214 aa	Predicted RBP	11.35	□□□□□ -0.59
MMS19-215	ENST00000478452	HUNK	P57058	714 aa		11.35	□□□□□ -0.59
MMS19-215	ENST00000478452	DLK2	Q6UY11	383 aa		11.35	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms