RNA–Protein interactions for RNA: ENST00000478264.1

PLOD3-213, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 663 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-213ENST00000478264 A0A0G2JLW4 131 aa22.84■■□□□ 1.25
PLOD3-213ENST00000478264 ZBTB7BO15156 539 aaPredicted RBP22.84■■□□□ 1.25
PLOD3-213ENST00000478264 CCDC152Q4G0S7 254 aa22.84■■□□□ 1.25
PLOD3-213ENST00000478264 STYK1Q6J9G0 422 aa22.84■■□□□ 1.25
PLOD3-213ENST00000478264 CHMP4BQ9H444 224 aaKnown RBP22.84■■□□□ 1.25
PLOD3-213ENST00000478264 FOXO4P98177 505 aa22.83■■□□□ 1.25
PLOD3-213ENST00000478264 TTLL11Q8NHH1 800 aa22.83■■□□□ 1.25
PLOD3-213ENST00000478264 RBM17Q96I25 401 aaKnown RBP22.83■■□□□ 1.25
PLOD3-213ENST00000478264 KAZALD1Q96I82 304 aa22.83■■□□□ 1.25
PLOD3-213ENST00000478264 RTL9Q8NET4 1388 aa22.82■■□□□ 1.24
PLOD3-213ENST00000478264 CSF1RP07333 972 aa22.82■■□□□ 1.24
PLOD3-213ENST00000478264 KCNA3P22001 575 aa22.82■■□□□ 1.24
PLOD3-213ENST00000478264 HOXA10P31260 410 aaPredicted RBP22.82■■□□□ 1.24
PLOD3-213ENST00000478264 BICC1Q9H694 974 aaKnown RBP22.82■■□□□ 1.24
PLOD3-213ENST00000478264 BRCA1P38398 1863 aaKnown RBP22.81■■□□□ 1.24
PLOD3-213ENST00000478264 GNAI2P04899 355 aa22.81■■□□□ 1.24
PLOD3-213ENST00000478264 RABL6Q3YEC7 729 aaPredicted RBP22.81■■□□□ 1.24
PLOD3-213ENST00000478264 EPHA10Q5JZY3 1008 aa22.81■■□□□ 1.24
PLOD3-213ENST00000478264 DDX46Q7L014 1031 aaKnown RBP22.81■■□□□ 1.24
PLOD3-213ENST00000478264 ZNF622Q969S3 477 aaKnown RBP eCLIP22.81■■□□□ 1.24
PLOD3-213ENST00000478264 LRRFIP2Q9Y608 721 aaKnown RBP22.81■■□□□ 1.24
PLOD3-213ENST00000478264 ALDH1B1P30837 517 aa22.8■■□□□ 1.24
PLOD3-213ENST00000478264 LMBR1LQ6UX01 489 aa22.8■■□□□ 1.24
PLOD3-213ENST00000478264 CNKSR1Q969H4 720 aa22.8■■□□□ 1.24
PLOD3-213ENST00000478264 CRAMP1Q96RY5 1269 aa22.8■■□□□ 1.24
PLOD3-213ENST00000478264 PIM2Q9P1W9 311 aa22.8■■□□□ 1.24
PLOD3-213ENST00000478264 ANKRD44Q8N8A2 993 aa22.79■■□□□ 1.24
PLOD3-213ENST00000478264 CCDC85AQ96PX6 553 aaPredicted RBP22.79■■□□□ 1.24
PLOD3-213ENST00000478264 GREM2Q9H772 168 aa22.79■■□□□ 1.24
PLOD3-213ENST00000478264 FAM161AQ3B820 660 aa22.78■■□□□ 1.24
PLOD3-213ENST00000478264 TTLL6Q8N841 843 aa22.78■■□□□ 1.24
PLOD3-213ENST00000478264 CHMP3Q9Y3E7 222 aa22.78■■□□□ 1.24
PLOD3-213ENST00000478264 GRAPQ13588 217 aa22.77■■□□□ 1.24
PLOD3-213ENST00000478264 GRAPLQ8TC17 118 aaPredicted RBP22.77■■□□□ 1.24
PLOD3-213ENST00000478264 ZBTB40Q9NUA8 1239 aa22.77■■□□□ 1.24
PLOD3-213ENST00000478264 ITGA6P23229 1130 aa22.76■■□□□ 1.23
PLOD3-213ENST00000478264 DALRD3Q5D0E6 543 aaKnown RBP22.76■■□□□ 1.23
PLOD3-213ENST00000478264 CRBNQ96SW2 442 aa22.76■■□□□ 1.23
PLOD3-213ENST00000478264 CDC5LQ99459 802 aaKnown RBP22.76■■□□□ 1.23
PLOD3-213ENST00000478264 CACNA1SQ13698 1873 aa22.75■■□□□ 1.23
PLOD3-213ENST00000478264 IFIT5Q13325 482 aaKnown RBP22.75■■□□□ 1.23
PLOD3-213ENST00000478264 PRPF40BQ6NWY9 871 aaKnown RBP22.75■■□□□ 1.23
PLOD3-213ENST00000478264 C1orf115Q9H7X2 142 aa22.75■■□□□ 1.23
PLOD3-213ENST00000478264 SEC31BQ9NQW1 1179 aa22.75■■□□□ 1.23
PLOD3-213ENST00000478264 ANKRD18BA2A2Z9 1011 aa22.74■■□□□ 1.23
PLOD3-213ENST00000478264 MTX1Q13505 466 aa22.74■■□□□ 1.23
PLOD3-213ENST00000478264 CCDC57Q2TAC2 916 aa22.74■■□□□ 1.23
PLOD3-213ENST00000478264 CELF1Q92879 486 aaKnown RBP22.74■■□□□ 1.23
PLOD3-213ENST00000478264 PPEF1O14829 653 aaPredicted RBP22.73■■□□□ 1.23
PLOD3-213ENST00000478264 BBOX1O75936 387 aa22.73■■□□□ 1.23
PLOD3-213ENST00000478264 ANKRD18AQ8IVF6 992 aa22.73■■□□□ 1.23
PLOD3-213ENST00000478264 WWC3Q9ULE0 1092 aa22.73■■□□□ 1.23
PLOD3-213ENST00000478264 BCS1LQ9Y276 419 aa22.73■■□□□ 1.23
PLOD3-213ENST00000478264 COL4A1P02462 1669 aa22.73■■□□□ 1.23
PLOD3-213ENST00000478264 TMC4Q7Z404 712 aa22.72■■□□□ 1.23
PLOD3-213ENST00000478264 SLX4Q8IY92 1834 aa22.72■■□□□ 1.23
PLOD3-213ENST00000478264 ARFGEF1Q9Y6D6 1849 aa22.71■■□□□ 1.23
PLOD3-213ENST00000478264 IGHMBP2P38935 993 aaKnown RBP22.71■■□□□ 1.23
PLOD3-213ENST00000478264 RPS8P62241 208 aaKnown RBP22.71■■□□□ 1.23
PLOD3-213ENST00000478264 TAF7LQ5H9L4 462 aa22.71■■□□□ 1.23
PLOD3-213ENST00000478264 TAF1P21675 1872 aa22.71■■□□□ 1.23
PLOD3-213ENST00000478264 SRGAP3O43295 1099 aa22.7■■□□□ 1.22
PLOD3-213ENST00000478264 CEP85Q6P2H3 762 aa22.7■■□□□ 1.22
PLOD3-213ENST00000478264 LRRC37AA6NMS7 1700 aa22.69■■□□□ 1.22
PLOD3-213ENST00000478264 AAMPQ13685 434 aa22.69■■□□□ 1.22
PLOD3-213ENST00000478264 SOGA3Q5TF21 947 aa22.69■■□□□ 1.22
PLOD3-213ENST00000478264 GOLGB1Q14789 3259 aaKnown RBP22.69■■□□□ 1.22
PLOD3-213ENST00000478264 RFX5P48382 616 aaPredicted RBP22.68■■□□□ 1.22
PLOD3-213ENST00000478264 PELP1Q8IZL8 1130 aaKnown RBP22.68■■□□□ 1.22
PLOD3-213ENST00000478264 C7orf43Q8WVR3 580 aa22.68■■□□□ 1.22
PLOD3-213ENST00000478264 MPHOSPH8Q99549 860 aa22.68■■□□□ 1.22
PLOD3-213ENST00000478264 ATP6V0A2Q9Y487 856 aa22.68■■□□□ 1.22
PLOD3-213ENST00000478264 SPEF2Q9C093 1822 aa22.68■■□□□ 1.22
PLOD3-213ENST00000478264 PNMA6EA0A0J9YXQ4 647 aa22.67■■□□□ 1.22
PLOD3-213ENST00000478264 C21orf2O43822 256 aa22.67■■□□□ 1.22
PLOD3-213ENST00000478264 IRX6P78412 446 aaPredicted RBP22.67■■□□□ 1.22
PLOD3-213ENST00000478264 ATP8B2P98198 1209 aa22.67■■□□□ 1.22
PLOD3-213ENST00000478264 CC2D2BQ6DHV5 1058 aa22.67■■□□□ 1.22
PLOD3-213ENST00000478264 RPAP2Q8IXW5 612 aaPredicted RBP22.67■■□□□ 1.22
PLOD3-213ENST00000478264 EXOC6Q8TAG9 804 aa22.67■■□□□ 1.22
PLOD3-213ENST00000478264 TMX4Q9H1E5 349 aaPredicted RBP22.67■■□□□ 1.22
PLOD3-213ENST00000478264 BSDC1Q9NW68 430 aaPredicted RBP22.67■■□□□ 1.22
PLOD3-213ENST00000478264 YBX3P16989 372 aaKnown RBP eCLIP22.66■■□□□ 1.22
PLOD3-213ENST00000478264 CCDC93Q567U6 631 aa22.66■■□□□ 1.22
PLOD3-213ENST00000478264 SP8Q8IXZ3 490 aa22.66■■□□□ 1.22
PLOD3-213ENST00000478264 ZNF594Q96JF6 807 aaPredicted RBP22.66■■□□□ 1.22
PLOD3-213ENST00000478264 ZNF219Q9P2Y4 722 aaPredicted RBP22.66■■□□□ 1.22
PLOD3-213ENST00000478264 PTPN12Q05209 780 aaKnown RBP22.65■■□□□ 1.22
PLOD3-213ENST00000478264 POLA2Q14181 598 aa22.65■■□□□ 1.22
PLOD3-213ENST00000478264 GPR162Q16538 588 aa22.65■■□□□ 1.22
PLOD3-213ENST00000478264 SSH3Q8TE77 659 aa22.65■■□□□ 1.22
PLOD3-213ENST00000478264 GRIPAP1Q4V328 841 aa22.64■■□□□ 1.21
PLOD3-213ENST00000478264 LDHAL6AQ6ZMR3 332 aa22.64■■□□□ 1.21
PLOD3-213ENST00000478264 KLHDC4Q8TBB5 520 aa22.64■■□□□ 1.21
PLOD3-213ENST00000478264 COPRSQ9NQ92 184 aa22.64■■□□□ 1.21
PLOD3-213ENST00000478264 FBXO3Q9UK99 471 aa22.64■■□□□ 1.21
PLOD3-213ENST00000478264 SNED1Q8TER0 1413 aa22.64■■□□□ 1.21
PLOD3-213ENST00000478264 CNNM1Q9NRU3 951 aa22.63■■□□□ 1.21
PLOD3-213ENST00000478264 HMMRO75330 724 aa22.62■■□□□ 1.21
PLOD3-213ENST00000478264 OLFM4Q6UX06 510 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms