RNA–Protein interactions for RNA: ENST00000478230.5

SNX21-210, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 907 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-210ENST00000478230 MPNDQ8N594 471 aa19.21■□□□□ 0.67
SNX21-210ENST00000478230 LINS1Q8NG48 757 aa19.21■□□□□ 0.67
SNX21-210ENST00000478230 RRAGCQ9HB90 399 aa19.21■□□□□ 0.67
SNX21-210ENST00000478230 NEURL1BA8MQ27 555 aa19.2■□□□□ 0.66
SNX21-210ENST00000478230 SLFN5Q08AF3 891 aa19.2■□□□□ 0.66
SNX21-210ENST00000478230 DPP8Q6V1X1 898 aaPredicted RBP19.2■□□□□ 0.66
SNX21-210ENST00000478230 IGKV5-2P06315 115 aa19.19■□□□□ 0.66
SNX21-210ENST00000478230 CT47B1P0C2W7 299 aaPredicted RBP19.19■□□□□ 0.66
SNX21-210ENST00000478230 RPS8P62241 208 aaKnown RBP19.19■□□□□ 0.66
SNX21-210ENST00000478230 OLFM4Q6UX06 510 aa19.19■□□□□ 0.66
SNX21-210ENST00000478230 RBM46Q8TBY0 533 aaKnown RBP19.19■□□□□ 0.66
SNX21-210ENST00000478230 EIF6P56537 245 aaKnown RBP19.18■□□□□ 0.66
SNX21-210ENST00000478230 LARGE2Q8N3Y3 721 aa19.18■□□□□ 0.66
SNX21-210ENST00000478230 CCDC88AQ3V6T2 1871 aa19.18■□□□□ 0.66
SNX21-210ENST00000478230 DICER1Q9UPY3 1922 aaKnown RBP19.17■□□□□ 0.66
SNX21-210ENST00000478230 IQCA1LA6NCM1 817 aa19.17■□□□□ 0.66
SNX21-210ENST00000478230 FSTL1Q12841 308 aa19.17■□□□□ 0.66
SNX21-210ENST00000478230 GCKRQ14397 625 aa19.17■□□□□ 0.66
SNX21-210ENST00000478230 CDC5LQ99459 802 aaKnown RBP19.17■□□□□ 0.66
SNX21-210ENST00000478230 RTFDC1Q9BY42 306 aaPredicted RBP19.17■□□□□ 0.66
SNX21-210ENST00000478230 H7C1W4 665 aa19.16■□□□□ 0.66
SNX21-210ENST00000478230 CWF19L2Q2TBE0 894 aaKnown RBP19.16■□□□□ 0.66
SNX21-210ENST00000478230 NIM1KQ8IY84 436 aa19.16■□□□□ 0.66
SNX21-210ENST00000478230 MIER1Q8N108 512 aa19.16■□□□□ 0.66
SNX21-210ENST00000478230 FZD9O00144 591 aa19.15■□□□□ 0.66
SNX21-210ENST00000478230 PPIP5K2O43314 1243 aa19.15■□□□□ 0.66
SNX21-210ENST00000478230 CTSWP56202 376 aa19.15■□□□□ 0.66
SNX21-210ENST00000478230 ALDH1L2Q3SY69 923 aa19.15■□□□□ 0.66
SNX21-210ENST00000478230 ANKRD18AQ8IVF6 992 aa19.15■□□□□ 0.66
SNX21-210ENST00000478230 DDNO94850 711 aaPredicted RBP19.14■□□□□ 0.65
SNX21-210ENST00000478230 UBE3BQ7Z3V4 1068 aa19.14■□□□□ 0.65
SNX21-210ENST00000478230 SMC1BQ8NDV3 1235 aa19.14■□□□□ 0.65
SNX21-210ENST00000478230 CELF1Q92879 486 aaKnown RBP19.14■□□□□ 0.65
SNX21-210ENST00000478230 EYA3Q99504 573 aa19.14■□□□□ 0.65
SNX21-210ENST00000478230 SNED1Q8TER0 1413 aa19.14■□□□□ 0.65
SNX21-210ENST00000478230 ALDH1L1O75891 902 aa19.13■□□□□ 0.65
SNX21-210ENST00000478230 TRMT2AQ8IZ69 625 aaKnown RBP19.13■□□□□ 0.65
SNX21-210ENST00000478230 GPC2Q8N158 579 aa19.13■□□□□ 0.65
SNX21-210ENST00000478230 L3MBTL3Q96JM7 780 aaPredicted RBP19.13■□□□□ 0.65
SNX21-210ENST00000478230 PLA2G12BQ9BX93 195 aa19.13■□□□□ 0.65
SNX21-210ENST00000478230 NSFL1CQ9UNZ2 370 aaKnown RBP19.13■□□□□ 0.65
SNX21-210ENST00000478230 PTPRCP08575 1304 aa19.13■□□□□ 0.65
SNX21-210ENST00000478230 TIAM2Q8IVF5 1701 aa19.13■□□□□ 0.65
SNX21-210ENST00000478230 LAMB2P55268 1798 aa19.12■□□□□ 0.65
SNX21-210ENST00000478230 DDX60Q8IY21 1712 aaKnown RBP19.12■□□□□ 0.65
SNX21-210ENST00000478230 HSPA6P17066 643 aa19.12■□□□□ 0.65
SNX21-210ENST00000478230 KIAA2012Q0VF49 1180 aa19.12■□□□□ 0.65
SNX21-210ENST00000478230 BEND3Q5T5X7 828 aa19.12■□□□□ 0.65
SNX21-210ENST00000478230 TTLL11Q8NHH1 800 aa19.12■□□□□ 0.65
SNX21-210ENST00000478230 JARID2Q92833 1246 aaPredicted RBP19.12■□□□□ 0.65
SNX21-210ENST00000478230 SRCIN1Q9C0H9 1055 aa19.12■□□□□ 0.65
SNX21-210ENST00000478230 F6X3S4 739 aa19.11■□□□□ 0.65
SNX21-210ENST00000478230 AOC3Q16853 763 aa19.11■□□□□ 0.65
SNX21-210ENST00000478230 WASHC4Q2M389 1173 aa19.11■□□□□ 0.65
SNX21-210ENST00000478230 SLC4A10Q6U841 1118 aa19.11■□□□□ 0.65
SNX21-210ENST00000478230 C9orf78Q9NZ63 289 aaPredicted RBP19.11■□□□□ 0.65
SNX21-210ENST00000478230 ZNRF3Q9ULT6 936 aa19.11■□□□□ 0.65
SNX21-210ENST00000478230 RTL9Q8NET4 1388 aa19.1■□□□□ 0.65
SNX21-210ENST00000478230 C6orf229H3BNL8 230 aa19.1■□□□□ 0.65
SNX21-210ENST00000478230 TNIP1Q15025 636 aa19.1■□□□□ 0.65
SNX21-210ENST00000478230 MRPL50Q8N5N7 158 aaKnown RBP19.1■□□□□ 0.65
SNX21-210ENST00000478230 CDCA7LQ96GN5 454 aa19.1■□□□□ 0.65
SNX21-210ENST00000478230 SEC31BQ9NQW1 1179 aa19.1■□□□□ 0.65
SNX21-210ENST00000478230 ANKIB1Q9P2G1 1089 aa19.1■□□□□ 0.65
SNX21-210ENST00000478230 WDR90Q96KV7 1748 aa19.09■□□□□ 0.65
SNX21-210ENST00000478230 LMOD1P29536 600 aaPredicted RBP19.09■□□□□ 0.65
SNX21-210ENST00000478230 IGHMBP2P38935 993 aaKnown RBP19.09■□□□□ 0.65
SNX21-210ENST00000478230 PNMA8AQ86V59 439 aaPredicted RBP19.09■□□□□ 0.65
SNX21-210ENST00000478230 PODXL2Q9NZ53 605 aa19.09■□□□□ 0.65
SNX21-210ENST00000478230 HACL1Q9UJ83 578 aa19.09■□□□□ 0.65
SNX21-210ENST00000478230 G3V3G9 751 aa19.08■□□□□ 0.64
SNX21-210ENST00000478230 APLP1P51693 650 aa19.08■□□□□ 0.64
SNX21-210ENST00000478230 DCAF8Q5TAQ9 597 aa19.08■□□□□ 0.64
SNX21-210ENST00000478230 CCDC85AQ96PX6 553 aaPredicted RBP19.08■□□□□ 0.64
SNX21-210ENST00000478230 ZC3H12CQ9C0D7 883 aaKnown RBP19.08■□□□□ 0.64
SNX21-210ENST00000478230 SMC4Q9NTJ3 1288 aa19.08■□□□□ 0.64
SNX21-210ENST00000478230 BSDC1Q9NW68 430 aaPredicted RBP19.08■□□□□ 0.64
SNX21-210ENST00000478230 GGA1Q9UJY5 639 aa19.08■□□□□ 0.64
SNX21-210ENST00000478230 ZNF541Q9H0D2 1346 aa19.07■□□□□ 0.64
SNX21-210ENST00000478230 POTECB2RU33 542 aa19.07■□□□□ 0.64
SNX21-210ENST00000478230 GRM8O00222 908 aa19.07■□□□□ 0.64
SNX21-210ENST00000478230 CSF1RP07333 972 aa19.07■□□□□ 0.64
SNX21-210ENST00000478230 GPSM2P81274 684 aa19.07■□□□□ 0.64
SNX21-210ENST00000478230 SSH1Q8WYL5 1049 aa19.07■□□□□ 0.64
SNX21-210ENST00000478230 MPHOSPH8Q99549 860 aa19.07■□□□□ 0.64
SNX21-210ENST00000478230 GJA3Q9Y6H8 435 aa19.07■□□□□ 0.64
SNX21-210ENST00000478230 XDHP47989 1333 aa19.06■□□□□ 0.64
SNX21-210ENST00000478230 ANKRD18BA2A2Z9 1011 aa19.06■□□□□ 0.64
SNX21-210ENST00000478230 ATP2B4P23634 1241 aa19.06■□□□□ 0.64
SNX21-210ENST00000478230 CASP7P55210 303 aa19.06■□□□□ 0.64
SNX21-210ENST00000478230 GREM2Q9H772 168 aa19.06■□□□□ 0.64
SNX21-210ENST00000478230 ITGA6P23229 1130 aa19.05■□□□□ 0.64
SNX21-210ENST00000478230 HNRNPUQ00839 825 aaKnown RBP eCLIP19.05■□□□□ 0.64
SNX21-210ENST00000478230 CIAPIN1Q6FI81 312 aa19.05■□□□□ 0.64
SNX21-210ENST00000478230 TBC1D16Q8TBP0 767 aa19.05■□□□□ 0.64
SNX21-210ENST00000478230 TAF1DQ9H5J8 278 aaPredicted RBP19.05■□□□□ 0.64
SNX21-210ENST00000478230 UFL1O94874 794 aa19.04■□□□□ 0.64
SNX21-210ENST00000478230 EPHX2P34913 555 aa19.04■□□□□ 0.64
SNX21-210ENST00000478230 BRPF1P55201 1214 aaPredicted RBP19.04■□□□□ 0.64
SNX21-210ENST00000478230 IFIT5Q13325 482 aaKnown RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms