RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 HHIPL1Q96JK4 782 aa12.68□□□□□ -0.38
CCM2-210ENST00000478169 PGAP2Q9UHJ9 254 aa12.68□□□□□ -0.38
CCM2-210ENST00000478169 GMPSP49915 693 aaPredicted RBP12.67□□□□□ -0.38
CCM2-210ENST00000478169 LMOD3Q0VAK6 560 aa12.67□□□□□ -0.38
CCM2-210ENST00000478169 KIAA2012Q0VF49 1180 aa12.67□□□□□ -0.38
CCM2-210ENST00000478169 PROSER3Q2NL68 480 aa12.67□□□□□ -0.38
CCM2-210ENST00000478169 DDX46Q7L014 1031 aaKnown RBP12.67□□□□□ -0.38
CCM2-210ENST00000478169 COPS6Q7L5N1 327 aa12.67□□□□□ -0.38
CCM2-210ENST00000478169 SAPCD2Q86UD0 394 aa12.67□□□□□ -0.38
CCM2-210ENST00000478169 NLRP10Q86W26 655 aa12.67□□□□□ -0.38
CCM2-210ENST00000478169 CASP8AP2Q9UKL3 1982 aa12.67□□□□□ -0.38
CCM2-210ENST00000478169 CA12O43570 354 aa12.66□□□□□ -0.38
CCM2-210ENST00000478169 CELF2O95319 508 aaKnown RBP12.66□□□□□ -0.38
CCM2-210ENST00000478169 GRM1Q13255 1194 aa12.66□□□□□ -0.38
CCM2-210ENST00000478169 TCIRG1Q13488 830 aa12.66□□□□□ -0.38
CCM2-210ENST00000478169 TMC4Q7Z404 712 aa12.66□□□□□ -0.38
CCM2-210ENST00000478169 TRMT112Q9UI30 125 aaKnown RBP12.66□□□□□ -0.38
CCM2-210ENST00000478169 SH3TC1Q8TE82 1336 aa12.65□□□□□ -0.38
CCM2-210ENST00000478169 ANXA1P04083 346 aa12.65□□□□□ -0.38
CCM2-210ENST00000478169 HCLS1P14317 486 aaPredicted RBP12.65□□□□□ -0.38
CCM2-210ENST00000478169 AIMP1Q12904 312 aaKnown RBP12.65□□□□□ -0.38
CCM2-210ENST00000478169 GRAPQ13588 217 aa12.65□□□□□ -0.38
CCM2-210ENST00000478169 CDC37L1Q7L3B6 337 aa12.65□□□□□ -0.38
CCM2-210ENST00000478169 GRAPLQ8TC17 118 aaPredicted RBP12.65□□□□□ -0.38
CCM2-210ENST00000478169 XAGE3Q8WTP9 111 aa12.65□□□□□ -0.38
CCM2-210ENST00000478169 BCL2L13Q9BXK5 485 aa12.65□□□□□ -0.38
CCM2-210ENST00000478169 LRRC37AA6NMS7 1700 aa12.65□□□□□ -0.38
CCM2-210ENST00000478169 AOC2O75106 756 aa12.64□□□□□ -0.39
CCM2-210ENST00000478169 RAD17O75943 681 aa12.64□□□□□ -0.39
CCM2-210ENST00000478169 TMPOP42166 694 aaKnown RBP12.64□□□□□ -0.39
CCM2-210ENST00000478169 HIRAP54198 1017 aaPredicted RBP12.64□□□□□ -0.39
CCM2-210ENST00000478169 GLIS2Q9BZE0 524 aaPredicted RBP12.64□□□□□ -0.39
CCM2-210ENST00000478169 CNOT7Q9UIV1 285 aaKnown RBP12.64□□□□□ -0.39
CCM2-210ENST00000478169 DDX60Q8IY21 1712 aaKnown RBP12.64□□□□□ -0.39
CCM2-210ENST00000478169 H7C1D1 291 aa12.63□□□□□ -0.39
CCM2-210ENST00000478169 BRPF1P55201 1214 aaPredicted RBP12.63□□□□□ -0.39
CCM2-210ENST00000478169 RALBP1Q15311 655 aa12.63□□□□□ -0.39
CCM2-210ENST00000478169 DUOX1Q9NRD9 1551 aa12.62□□□□□ -0.39
CCM2-210ENST00000478169 YDJCA8MPS7 323 aa12.62□□□□□ -0.39
CCM2-210ENST00000478169 CHL1O00533 1208 aa12.62□□□□□ -0.39
CCM2-210ENST00000478169 RGS19P49795 217 aa12.62□□□□□ -0.39
CCM2-210ENST00000478169 NECTIN2Q92692 538 aa12.62□□□□□ -0.39
CCM2-210ENST00000478169 DPF2Q92785 391 aa12.62□□□□□ -0.39
CCM2-210ENST00000478169 CCDC85CA6NKD9 419 aa12.61□□□□□ -0.39
CCM2-210ENST00000478169 WASHC4Q2M389 1173 aa12.61□□□□□ -0.39
CCM2-210ENST00000478169 FAM161AQ3B820 660 aa12.61□□□□□ -0.39
CCM2-210ENST00000478169 MICALL2Q8IY33 904 aa12.61□□□□□ -0.39
CCM2-210ENST00000478169 PLBD2Q8NHP8 589 aa12.61□□□□□ -0.39
CCM2-210ENST00000478169 TRPM4Q8TD43 1214 aa12.61□□□□□ -0.39
CCM2-210ENST00000478169 ZNF408Q9H9D4 720 aa12.61□□□□□ -0.39
CCM2-210ENST00000478169 TSKSQ9UJT2 592 aa12.61□□□□□ -0.39
CCM2-210ENST00000478169 AKAP11Q9UKA4 1901 aa12.6□□□□□ -0.39
CCM2-210ENST00000478169 HOXB7P09629 217 aa12.6□□□□□ -0.39
CCM2-210ENST00000478169 NOGQ13253 232 aa12.6□□□□□ -0.39
CCM2-210ENST00000478169 SF3B3Q15393 1217 aaKnown RBP12.6□□□□□ -0.39
CCM2-210ENST00000478169 ANKRD13DQ6ZTN6 518 aa12.6□□□□□ -0.39
CCM2-210ENST00000478169 CHPF2Q9P2E5 772 aa12.6□□□□□ -0.39
CCM2-210ENST00000478169 SHTN1A0MZ66 631 aa12.59□□□□□ -0.39
CCM2-210ENST00000478169 PSMD14O00487 310 aa12.59□□□□□ -0.39
CCM2-210ENST00000478169 RPS12P25398 132 aaKnown RBP12.59□□□□□ -0.39
CCM2-210ENST00000478169 MLLT1Q03111 559 aaPredicted RBP12.59□□□□□ -0.39
CCM2-210ENST00000478169 HDGFL1Q5TGJ6 251 aa12.59□□□□□ -0.39
CCM2-210ENST00000478169 USP48Q86UV5 1035 aa12.59□□□□□ -0.39
CCM2-210ENST00000478169 CELF1Q92879 486 aaKnown RBP12.59□□□□□ -0.39
CCM2-210ENST00000478169 EYA3Q99504 573 aa12.59□□□□□ -0.39
CCM2-210ENST00000478169 ISCA1Q9BUE6 129 aa12.59□□□□□ -0.39
CCM2-210ENST00000478169 DBF4Q9UBU7 674 aaPredicted RBP12.59□□□□□ -0.39
CCM2-210ENST00000478169 NSFL1CQ9UNZ2 370 aaKnown RBP12.59□□□□□ -0.39
CCM2-210ENST00000478169 ZBTB12Q9Y330 459 aaPredicted RBP12.59□□□□□ -0.39
CCM2-210ENST00000478169 HUNKP57058 714 aa12.58□□□□□ -0.4
CCM2-210ENST00000478169 TRIM28Q13263 835 aaKnown RBP12.58□□□□□ -0.4
CCM2-210ENST00000478169 NEUROD2Q15784 382 aa12.58□□□□□ -0.4
CCM2-210ENST00000478169 KRT24Q2M2I5 525 aa12.58□□□□□ -0.4
CCM2-210ENST00000478169 SAMD7Q7Z3H4 446 aa12.58□□□□□ -0.4
CCM2-210ENST00000478169 FAM89AQ96GI7 184 aa12.58□□□□□ -0.4
CCM2-210ENST00000478169 MCOLN1Q9GZU1 580 aa12.58□□□□□ -0.4
CCM2-210ENST00000478169 HYPKQ9NX55 129 aa12.58□□□□□ -0.4
CCM2-210ENST00000478169 POLLQ9UGP5 575 aa12.58□□□□□ -0.4
CCM2-210ENST00000478169 SCN9AQ15858 1988 aa12.58□□□□□ -0.4
CCM2-210ENST00000478169 C6orf229H3BNL8 230 aa12.57□□□□□ -0.4
CCM2-210ENST00000478169 KRT26Q7Z3Y9 468 aa12.57□□□□□ -0.4
CCM2-210ENST00000478169 RUNDC1Q96C34 613 aa12.57□□□□□ -0.4
CCM2-210ENST00000478169 DCPSQ96C86 337 aaKnown RBP12.57□□□□□ -0.4
CCM2-210ENST00000478169 DBNDD1Q9H9R9 158 aa12.57□□□□□ -0.4
CCM2-210ENST00000478169 TRIM35Q9UPQ4 493 aa12.57□□□□□ -0.4
CCM2-210ENST00000478169 LAS1LQ9Y4W2 734 aaKnown RBP12.57□□□□□ -0.4
CCM2-210ENST00000478169 PSME4Q14997 1843 aa12.56□□□□□ -0.4
CCM2-210ENST00000478169 ATP5J2-PTCD1G3V325 749 aa12.56□□□□□ -0.4
CCM2-210ENST00000478169 RIMBP2O15034 1052 aa12.56□□□□□ -0.4
CCM2-210ENST00000478169 ECE2O60344 883 aa12.56□□□□□ -0.4
CCM2-210ENST00000478169 SLC34A2O95436 690 aa12.56□□□□□ -0.4
CCM2-210ENST00000478169 RPS8P62241 208 aaKnown RBP12.56□□□□□ -0.4
CCM2-210ENST00000478169 GPSM2P81274 684 aa12.56□□□□□ -0.4
CCM2-210ENST00000478169 TBC1D10BQ4KMP7 808 aaPredicted RBP12.56□□□□□ -0.4
CCM2-210ENST00000478169 RGMBQ6NW40 437 aa12.56□□□□□ -0.4
CCM2-210ENST00000478169 CCDC146Q8IYE0 955 aa12.56□□□□□ -0.4
CCM2-210ENST00000478169 C2orf69Q8N8R5 385 aa12.56□□□□□ -0.4
CCM2-210ENST00000478169 TBC1D16Q8TBP0 767 aa12.56□□□□□ -0.4
CCM2-210ENST00000478169 CCDC102AQ96A19 550 aa12.56□□□□□ -0.4
CCM2-210ENST00000478169 GBA2Q9HCG7 927 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms