RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 BBOX1O75936 387 aa29.02■■■□□ 2.24
TRAF4-211ENST00000478021 PSMD1Q99460 953 aa29.02■■■□□ 2.24
TRAF4-211ENST00000478021 PDE8AO60658 829 aa29.01■■■□□ 2.23
TRAF4-211ENST00000478021 IARSP41252 1262 aaKnown RBP29.01■■■□□ 2.23
TRAF4-211ENST00000478021 CELF1Q92879 486 aaKnown RBP29.01■■■□□ 2.23
TRAF4-211ENST00000478021 TMX4Q9H1E5 349 aaPredicted RBP29.01■■■□□ 2.23
TRAF4-211ENST00000478021 RRAGCQ9HB90 399 aa29.01■■■□□ 2.23
TRAF4-211ENST00000478021 CDHR2Q9BYE9 1310 aa29■■■□□ 2.23
TRAF4-211ENST00000478021 CCDC85AQ96PX6 553 aaPredicted RBP29■■■□□ 2.23
TRAF4-211ENST00000478021 MYH3P11055 1940 aa29■■■□□ 2.23
TRAF4-211ENST00000478021 HSP90B1P14625 803 aaKnown RBP28.99■■■□□ 2.23
TRAF4-211ENST00000478021 SP8Q8IXZ3 490 aa28.99■■■□□ 2.23
TRAF4-211ENST00000478021 LRRC37AA6NMS7 1700 aa28.98■■■□□ 2.23
TRAF4-211ENST00000478021 SEC31BQ9NQW1 1179 aa28.98■■■□□ 2.23
TRAF4-211ENST00000478021 COL4A5P29400 1685 aa28.97■■■□□ 2.23
TRAF4-211ENST00000478021 GCKRQ14397 625 aa28.97■■■□□ 2.23
TRAF4-211ENST00000478021 GRIPAP1Q4V328 841 aa28.97■■■□□ 2.23
TRAF4-211ENST00000478021 DPY19L2Q6NUT2 758 aa28.97■■■□□ 2.23
TRAF4-211ENST00000478021 UBE3BQ7Z3V4 1068 aa28.97■■■□□ 2.23
TRAF4-211ENST00000478021 TRMT2AQ8IZ69 625 aaKnown RBP28.97■■■□□ 2.23
TRAF4-211ENST00000478021 LINS1Q8NG48 757 aa28.97■■■□□ 2.23
TRAF4-211ENST00000478021 MRPL50Q8N5N7 158 aaKnown RBP28.96■■■□□ 2.23
TRAF4-211ENST00000478021 H7C1W4 665 aa28.95■■■□□ 2.22
TRAF4-211ENST00000478021 CCDC152Q4G0S7 254 aa28.95■■■□□ 2.22
TRAF4-211ENST00000478021 BCL2L13Q9BXK5 485 aa28.95■■■□□ 2.22
TRAF4-211ENST00000478021 ZNF541Q9H0D2 1346 aa28.94■■■□□ 2.22
TRAF4-211ENST00000478021 WDR90Q96KV7 1748 aa28.94■■■□□ 2.22
TRAF4-211ENST00000478021 DDNO94850 711 aaPredicted RBP28.94■■■□□ 2.22
TRAF4-211ENST00000478021 CTSWP56202 376 aa28.94■■■□□ 2.22
TRAF4-211ENST00000478021 BEND3Q5T5X7 828 aa28.94■■■□□ 2.22
TRAF4-211ENST00000478021 DPP8Q6V1X1 898 aaPredicted RBP28.94■■■□□ 2.22
TRAF4-211ENST00000478021 MPNDQ8N594 471 aa28.94■■■□□ 2.22
TRAF4-211ENST00000478021 SSH1Q8WYL5 1049 aa28.94■■■□□ 2.22
TRAF4-211ENST00000478021 TMC4Q7Z404 712 aa28.93■■■□□ 2.22
TRAF4-211ENST00000478021 LARGE2Q8N3Y3 721 aa28.93■■■□□ 2.22
TRAF4-211ENST00000478021 SPEF2Q9C093 1822 aa28.92■■■□□ 2.22
TRAF4-211ENST00000478021 RPS8P62241 208 aaKnown RBP28.92■■■□□ 2.22
TRAF4-211ENST00000478021 AOC3Q16853 763 aa28.92■■■□□ 2.22
TRAF4-211ENST00000478021 SLC4A10Q6U841 1118 aa28.92■■■□□ 2.22
TRAF4-211ENST00000478021 C16orf71Q8IYS4 520 aaPredicted RBP28.92■■■□□ 2.22
TRAF4-211ENST00000478021 JDP2Q8WYK2 163 aa28.92■■■□□ 2.22
TRAF4-211ENST00000478021 DUOX1Q9NRD9 1551 aa28.92■■■□□ 2.22
TRAF4-211ENST00000478021 PPIP5K2O43314 1243 aa28.91■■■□□ 2.22
TRAF4-211ENST00000478021 HNRNPUQ00839 825 aaKnown RBP eCLIP28.91■■■□□ 2.22
TRAF4-211ENST00000478021 CASP7P55210 303 aa28.9■■■□□ 2.22
TRAF4-211ENST00000478021 SUPT20HQ8NEM7 779 aa28.9■■■□□ 2.22
TRAF4-211ENST00000478021 TTLL11Q8NHH1 800 aa28.9■■■□□ 2.22
TRAF4-211ENST00000478021 RTFDC1Q9BY42 306 aaPredicted RBP28.9■■■□□ 2.22
TRAF4-211ENST00000478021 POTECB2RU33 542 aa28.89■■■□□ 2.22
TRAF4-211ENST00000478021 FZD9O00144 591 aa28.89■■■□□ 2.22
TRAF4-211ENST00000478021 TOMM70O94826 608 aa28.89■■■□□ 2.22
TRAF4-211ENST00000478021 VEGFAP15692 232 aaPredicted RBP28.88■■■□□ 2.21
TRAF4-211ENST00000478021 GREM2Q9H772 168 aa28.88■■■□□ 2.21
TRAF4-211ENST00000478021 GPSM2P81274 684 aa28.87■■■□□ 2.21
TRAF4-211ENST00000478021 NIM1KQ8IY84 436 aa28.87■■■□□ 2.21
TRAF4-211ENST00000478021 SMC4Q9NTJ3 1288 aa28.87■■■□□ 2.21
TRAF4-211ENST00000478021 NSFL1CQ9UNZ2 370 aaKnown RBP28.87■■■□□ 2.21
TRAF4-211ENST00000478021 LTBP1Q14766 1721 aa28.86■■■□□ 2.21
TRAF4-211ENST00000478021 ALDH1L2Q3SY69 923 aa28.86■■■□□ 2.21
TRAF4-211ENST00000478021 ANKRD18AQ8IVF6 992 aa28.86■■■□□ 2.21
TRAF4-211ENST00000478021 PLA2G12BQ9BX93 195 aa28.85■■■□□ 2.21
TRAF4-211ENST00000478021 SRCIN1Q9C0H9 1055 aa28.85■■■□□ 2.21
TRAF4-211ENST00000478021 EIF6P56537 245 aaKnown RBP28.84■■■□□ 2.21
TRAF4-211ENST00000478021 CDC5LQ99459 802 aaKnown RBP28.84■■■□□ 2.21
TRAF4-211ENST00000478021 PTPRCP08575 1304 aa28.84■■■□□ 2.21
TRAF4-211ENST00000478021 ALDH1L1O75891 902 aa28.83■■■□□ 2.21
TRAF4-211ENST00000478021 KIAA2012Q0VF49 1180 aa28.83■■■□□ 2.21
TRAF4-211ENST00000478021 RBM46Q8TBY0 533 aaKnown RBP28.83■■■□□ 2.21
TRAF4-211ENST00000478021 VPS33BQ9H267 617 aa28.83■■■□□ 2.21
TRAF4-211ENST00000478021 C6orf229H3BNL8 230 aa28.82■■■□□ 2.2
TRAF4-211ENST00000478021 GRM8O00222 908 aa28.82■■■□□ 2.2
TRAF4-211ENST00000478021 CT47B1P0C2W7 299 aaPredicted RBP28.82■■■□□ 2.2
TRAF4-211ENST00000478021 FAM161AQ3B820 660 aa28.82■■■□□ 2.2
TRAF4-211ENST00000478021 GPR101Q96P66 508 aaPredicted RBP28.82■■■□□ 2.2
TRAF4-211ENST00000478021 POLLQ9UGP5 575 aa28.82■■■□□ 2.2
TRAF4-211ENST00000478021 GJA3Q9Y6H8 435 aa28.82■■■□□ 2.2
TRAF4-211ENST00000478021 RTL9Q8NET4 1388 aa28.82■■■□□ 2.2
TRAF4-211ENST00000478021 SCN4AP35499 1836 aa28.81■■■□□ 2.2
TRAF4-211ENST00000478021 L3MBTL3Q96JM7 780 aaPredicted RBP28.81■■■□□ 2.2
TRAF4-211ENST00000478021 C9orf78Q9NZ63 289 aaPredicted RBP28.81■■■□□ 2.2
TRAF4-211ENST00000478021 ANKIB1Q9P2G1 1089 aa28.8■■■□□ 2.2
TRAF4-211ENST00000478021 RIMBP2O15034 1052 aa28.79■■■□□ 2.2
TRAF4-211ENST00000478021 CSF1RP07333 972 aa28.79■■■□□ 2.2
TRAF4-211ENST00000478021 ITGA6P23229 1130 aa28.79■■■□□ 2.2
TRAF4-211ENST00000478021 WASHC4Q2M389 1173 aa28.79■■■□□ 2.2
TRAF4-211ENST00000478021 GPC2Q8N158 579 aa28.79■■■□□ 2.2
TRAF4-211ENST00000478021 TBC1D16Q8TBP0 767 aa28.79■■■□□ 2.2
TRAF4-211ENST00000478021 FOXO4P98177 505 aa28.78■■■□□ 2.2
TRAF4-211ENST00000478021 EPHA10Q5JZY3 1008 aa28.78■■■□□ 2.2
TRAF4-211ENST00000478021 ZNRF3Q9ULT6 936 aa28.78■■■□□ 2.2
TRAF4-211ENST00000478021 CHMP3Q9Y3E7 222 aa28.78■■■□□ 2.2
TRAF4-211ENST00000478021 UFL1O94874 794 aa28.77■■■□□ 2.2
TRAF4-211ENST00000478021 PODXL2Q9NZ53 605 aa28.77■■■□□ 2.2
TRAF4-211ENST00000478021 IQCA1LA6NCM1 817 aa28.76■■■□□ 2.19
TRAF4-211ENST00000478021 HSPA6P17066 643 aa28.76■■■□□ 2.19
TRAF4-211ENST00000478021 IGHMBP2P38935 993 aaKnown RBP28.76■■■□□ 2.19
TRAF4-211ENST00000478021 EYA3Q99504 573 aa28.76■■■□□ 2.19
TRAF4-211ENST00000478021 BSDC1Q9NW68 430 aaPredicted RBP28.76■■■□□ 2.19
TRAF4-211ENST00000478021 GGA1Q9UJY5 639 aa28.76■■■□□ 2.19
TRAF4-211ENST00000478021 NOB1Q9ULX3 412 aaKnown RBP28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms