RNA–Protein interactions for RNA: ENST00000477748.1

PDE6D-204, Transcript of phosphodiesterase 6D, humanhuman

TSL 1 (best)

Gene PDE6D, Length 996 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-204ENST00000477748 SCN4AP35499 1836 aa18.1■□□□□ 0.49
PDE6D-204ENST00000477748 KSR2Q6VAB6 950 aa18.1■□□□□ 0.49
PDE6D-204ENST00000477748 LDHDQ86WU2 507 aa18.1■□□□□ 0.49
PDE6D-204ENST00000477748 GPC2Q8N158 579 aa18.1■□□□□ 0.49
PDE6D-204ENST00000477748 FAM89AQ96GI7 184 aa18.1■□□□□ 0.49
PDE6D-204ENST00000477748 METTL22Q9BUU2 404 aaPredicted RBP18.1■□□□□ 0.49
PDE6D-204ENST00000477748 TAF1DQ9H5J8 278 aaPredicted RBP18.1■□□□□ 0.49
PDE6D-204ENST00000477748 MAP3K2Q9Y2U5 619 aa18.1■□□□□ 0.49
PDE6D-204ENST00000477748 ATP6V0A2Q9Y487 856 aa18.1■□□□□ 0.49
PDE6D-204ENST00000477748 ABCC4O15439 1325 aa18.09■□□□□ 0.49
PDE6D-204ENST00000477748 PI4KAP2A4QPH2 592 aa18.09■□□□□ 0.49
PDE6D-204ENST00000477748 RTL5Q5HYW3 569 aaPredicted RBP18.09■□□□□ 0.49
PDE6D-204ENST00000477748 MIER1Q8N108 512 aa18.09■□□□□ 0.49
PDE6D-204ENST00000477748 PI4KAP1Q8N8J0 262 aa18.09■□□□□ 0.49
PDE6D-204ENST00000477748 VPS33BQ9H267 617 aa18.09■□□□□ 0.49
PDE6D-204ENST00000477748 HACL1Q9UJ83 578 aa18.09■□□□□ 0.49
PDE6D-204ENST00000477748 DDX60Q8IY21 1712 aaKnown RBP18.09■□□□□ 0.49
PDE6D-204ENST00000477748 BBOX1O75936 387 aa18.08■□□□□ 0.48
PDE6D-204ENST00000477748 EIF6P56537 245 aaKnown RBP18.08■□□□□ 0.48
PDE6D-204ENST00000477748 LARGE2Q8N3Y3 721 aa18.08■□□□□ 0.48
PDE6D-204ENST00000477748 CCDC191Q8NCU4 936 aa18.08■□□□□ 0.48
PDE6D-204ENST00000477748 NEXNQ0ZGT2 675 aa18.07■□□□□ 0.48
PDE6D-204ENST00000477748 FLIIQ13045 1269 aa18.07■□□□□ 0.48
PDE6D-204ENST00000477748 DDX46Q7L014 1031 aaKnown RBP18.07■□□□□ 0.48
PDE6D-204ENST00000477748 PNMA8AQ86V59 439 aaPredicted RBP18.07■□□□□ 0.48
PDE6D-204ENST00000477748 SUPT20HQ8NEM7 779 aa18.07■□□□□ 0.48
PDE6D-204ENST00000477748 CWC25Q9NXE8 425 aaPredicted RBP18.07■□□□□ 0.48
PDE6D-204ENST00000477748 E9PSI1 815 aa18.06■□□□□ 0.48
PDE6D-204ENST00000477748 IRS4O14654 1257 aaPredicted RBP18.06■□□□□ 0.48
PDE6D-204ENST00000477748 POTEIP0CG38 1075 aa18.06■□□□□ 0.48
PDE6D-204ENST00000477748 POTEJP0CG39 1038 aa18.06■□□□□ 0.48
PDE6D-204ENST00000477748 FKBP5Q13451 457 aaPredicted RBP18.06■□□□□ 0.48
PDE6D-204ENST00000477748 TMC4Q7Z404 712 aa18.06■□□□□ 0.48
PDE6D-204ENST00000477748 ZBTB38Q8NAP3 1195 aaPredicted RBP18.06■□□□□ 0.48
PDE6D-204ENST00000477748 PPIP5K2O43314 1243 aa18.05■□□□□ 0.48
PDE6D-204ENST00000477748 EPHX2P34913 555 aa18.05■□□□□ 0.48
PDE6D-204ENST00000477748 GRAPQ13588 217 aa18.05■□□□□ 0.48
PDE6D-204ENST00000477748 SP8Q8IXZ3 490 aa18.05■□□□□ 0.48
PDE6D-204ENST00000477748 NIM1KQ8IY84 436 aa18.05■□□□□ 0.48
PDE6D-204ENST00000477748 GRAPLQ8TC17 118 aaPredicted RBP18.05■□□□□ 0.48
PDE6D-204ENST00000477748 RTFDC1Q9BY42 306 aaPredicted RBP18.05■□□□□ 0.48
PDE6D-204ENST00000477748 CREBZFQ9NS37 354 aa18.05■□□□□ 0.48
PDE6D-204ENST00000477748 COL4A5P29400 1685 aa18.05■□□□□ 0.48
PDE6D-204ENST00000477748 TAF1P21675 1872 aa18.05■□□□□ 0.48
PDE6D-204ENST00000477748 PCCAP05165 728 aaPredicted RBP18.04■□□□□ 0.48
PDE6D-204ENST00000477748 HSPA1AP0DMV8 641 aaKnown RBP18.04■□□□□ 0.48
PDE6D-204ENST00000477748 HSPA1BP0DMV9 641 aaKnown RBP18.04■□□□□ 0.48
PDE6D-204ENST00000477748 HSP90B1P14625 803 aaKnown RBP18.04■□□□□ 0.48
PDE6D-204ENST00000477748 DPP8Q6V1X1 898 aaPredicted RBP18.04■□□□□ 0.48
PDE6D-204ENST00000477748 PASKQ96RG2 1323 aa18.03■□□□□ 0.48
PDE6D-204ENST00000477748 IGKV5-2P06315 115 aa18.03■□□□□ 0.48
PDE6D-204ENST00000477748 LMOD1P29536 600 aaPredicted RBP18.03■□□□□ 0.48
PDE6D-204ENST00000477748 SLFN5Q08AF3 891 aa18.03■□□□□ 0.48
PDE6D-204ENST00000477748 SF3B3Q15393 1217 aaKnown RBP18.03■□□□□ 0.48
PDE6D-204ENST00000477748 EAPPQ56P03 285 aaPredicted RBP18.03■□□□□ 0.48
PDE6D-204ENST00000477748 SLC51AQ86UW1 340 aa18.03■□□□□ 0.48
PDE6D-204ENST00000477748 JARID2Q92833 1246 aaPredicted RBP18.03■□□□□ 0.48
PDE6D-204ENST00000477748 AOC3Q16853 763 aa18.02■□□□□ 0.48
PDE6D-204ENST00000477748 CWF19L2Q2TBE0 894 aaKnown RBP18.02■□□□□ 0.48
PDE6D-204ENST00000477748 MPNDQ8N594 471 aa18.02■□□□□ 0.48
PDE6D-204ENST00000477748 DNAAF4Q8WXU2 420 aa18.02■□□□□ 0.48
PDE6D-204ENST00000477748 CDCA7LQ96GN5 454 aa18.02■□□□□ 0.48
PDE6D-204ENST00000477748 GJA3Q9Y6H8 435 aa18.02■□□□□ 0.48
PDE6D-204ENST00000477748 NEURL1BA8MQ27 555 aa18.01■□□□□ 0.47
PDE6D-204ENST00000477748 ADAMTSL1Q8N6G6 1762 aa18.01■□□□□ 0.47
PDE6D-204ENST00000477748 PDE8AO60658 829 aa18■□□□□ 0.47
PDE6D-204ENST00000477748 KIAA2012Q0VF49 1180 aa18■□□□□ 0.47
PDE6D-204ENST00000477748 ZNRF3Q9ULT6 936 aa18■□□□□ 0.47
PDE6D-204ENST00000477748 CLEC11AQ9Y240 323 aa18■□□□□ 0.47
PDE6D-204ENST00000477748 CDHR2Q9BYE9 1310 aa17.99■□□□□ 0.47
PDE6D-204ENST00000477748 SLC34A2O95436 690 aa17.99■□□□□ 0.47
PDE6D-204ENST00000477748 SCNN1DP51172 638 aa17.99■□□□□ 0.47
PDE6D-204ENST00000477748 F6X3S4 739 aa17.98■□□□□ 0.47
PDE6D-204ENST00000477748 ITGBL1O95965 494 aaPredicted RBP17.98■□□□□ 0.47
PDE6D-204ENST00000477748 LINS1Q8NG48 757 aa17.98■□□□□ 0.47
PDE6D-204ENST00000477748 CELF1Q92879 486 aaKnown RBP17.98■□□□□ 0.47
PDE6D-204ENST00000477748 MYH3P11055 1940 aa17.98■□□□□ 0.47
PDE6D-204ENST00000477748 LRRC37AA6NMS7 1700 aa17.98■□□□□ 0.47
PDE6D-204ENST00000477748 GCKRQ14397 625 aa17.97■□□□□ 0.47
PDE6D-204ENST00000477748 CCDC152Q4G0S7 254 aa17.97■□□□□ 0.47
PDE6D-204ENST00000477748 USP50Q70EL3 339 aaPredicted RBP17.97■□□□□ 0.47
PDE6D-204ENST00000477748 CNTROBQ8N137 903 aa17.97■□□□□ 0.47
PDE6D-204ENST00000477748 CNTNAP1P78357 1384 aa17.96■□□□□ 0.47
PDE6D-204ENST00000477748 TMEM88BA6NKF7 163 aa17.96■□□□□ 0.47
PDE6D-204ENST00000477748 H7C1W4 665 aa17.96■□□□□ 0.47
PDE6D-204ENST00000477748 UBE3BQ7Z3V4 1068 aa17.96■□□□□ 0.47
PDE6D-204ENST00000477748 TRMT2AQ8IZ69 625 aaKnown RBP17.96■□□□□ 0.47
PDE6D-204ENST00000477748 CCDC85AQ96PX6 553 aaPredicted RBP17.96■□□□□ 0.47
PDE6D-204ENST00000477748 DUOX1Q9NRD9 1551 aa17.96■□□□□ 0.46
PDE6D-204ENST00000477748 LTBP1Q14766 1721 aa17.95■□□□□ 0.46
PDE6D-204ENST00000477748 EPS15P42566 896 aa17.95■□□□□ 0.46
PDE6D-204ENST00000477748 RPS8P62241 208 aaKnown RBP17.95■□□□□ 0.46
PDE6D-204ENST00000477748 CXCL9Q07325 125 aa17.95■□□□□ 0.46
PDE6D-204ENST00000477748 TNIP1Q15025 636 aa17.95■□□□□ 0.46
PDE6D-204ENST00000477748 MAP1SQ66K74 1059 aaPredicted RBP17.95■□□□□ 0.46
PDE6D-204ENST00000477748 MRPL50Q8N5N7 158 aaKnown RBP17.95■□□□□ 0.46
PDE6D-204ENST00000477748 SEC31BQ9NQW1 1179 aa17.95■□□□□ 0.46
PDE6D-204ENST00000477748 GPRC5DQ9NZD1 345 aa17.95■□□□□ 0.46
PDE6D-204ENST00000477748 COL4A1P02462 1669 aa17.94■□□□□ 0.46
PDE6D-204ENST00000477748 CTSWP56202 376 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms