RNA–Protein interactions for RNA: ENST00000477741.5

NELFCD-205, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,070 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-205ENST00000477741 OS9Q13438 667 aaPredicted RBP17.73■□□□□ 0.43
NELFCD-205ENST00000477741 PUS3Q9BZE2 481 aaKnown RBP17.73■□□□□ 0.43
NELFCD-205ENST00000477741 LRRCC1Q9C099 1032 aa17.73■□□□□ 0.43
NELFCD-205ENST00000477741 SASH1O94885 1247 aa17.73■□□□□ 0.43
NELFCD-205ENST00000477741 GTF2E1P29083 439 aaPredicted RBP17.73■□□□□ 0.43
NELFCD-205ENST00000477741 TM4SF1P30408 202 aa17.73■□□□□ 0.43
NELFCD-205ENST00000477741 RHPN1Q8TCX5 695 aa17.73■□□□□ 0.43
NELFCD-205ENST00000477741 COPRSQ9NQ92 184 aa17.73■□□□□ 0.43
NELFCD-205ENST00000477741 STK32BQ9NY57 414 aa17.73■□□□□ 0.43
NELFCD-205ENST00000477741 ITGA6P23229 1130 aa17.72■□□□□ 0.43
NELFCD-205ENST00000477741 LRRC24Q50LG9 513 aa17.72■□□□□ 0.43
NELFCD-205ENST00000477741 SEC31BQ9NQW1 1179 aa17.72■□□□□ 0.43
NELFCD-205ENST00000477741 TSHZ3Q63HK5 1081 aa17.71■□□□□ 0.43
NELFCD-205ENST00000477741 UPF1Q92900 1129 aaKnown RBP eCLIP17.71■□□□□ 0.431e-6■□□□□ 9.8
NELFCD-205ENST00000477741 CCDC57Q2TAC2 916 aa17.71■□□□□ 0.43
NELFCD-205ENST00000477741 CARMIL3Q8ND23 1372 aa17.71■□□□□ 0.43
NELFCD-205ENST00000477741 G3BP1Q13283 466 aaKnown RBP eCLIP17.7■□□□□ 0.427e-8■■■□□ 15.6
NELFCD-205ENST00000477741 TPTE2Q6XPS3 522 aa17.7■□□□□ 0.42
NELFCD-205ENST00000477741 GOLGB1Q14789 3259 aaKnown RBP17.7■□□□□ 0.42
NELFCD-205ENST00000477741 POLRMTO00411 1230 aaKnown RBP17.7■□□□□ 0.42
NELFCD-205ENST00000477741 SERPINB2P05120 415 aa17.7■□□□□ 0.42
NELFCD-205ENST00000477741 IFIT5Q13325 482 aaKnown RBP17.7■□□□□ 0.42
NELFCD-205ENST00000477741 PRR5LQ6MZQ0 368 aa17.7■□□□□ 0.42
NELFCD-205ENST00000477741 ATG9AQ7Z3C6 839 aa17.7■□□□□ 0.42
NELFCD-205ENST00000477741 COL24A1Q17RW2 1714 aa17.69■□□□□ 0.42
NELFCD-205ENST00000477741 COL4A1P02462 1669 aa17.69■□□□□ 0.42
NELFCD-205ENST00000477741 NPHP1O15259 732 aa17.69■□□□□ 0.42
NELFCD-205ENST00000477741 RAB11FIP3O75154 756 aa17.69■□□□□ 0.42
NELFCD-205ENST00000477741 HMGB2P26583 209 aaKnown RBP17.69■□□□□ 0.42
NELFCD-205ENST00000477741 CCDC125Q86Z20 511 aa17.69■□□□□ 0.42
NELFCD-205ENST00000477741 PLEKHM2Q8IWE5 1019 aa17.69■□□□□ 0.42
NELFCD-205ENST00000477741 KIF1BPQ96EK5 621 aa17.69■□□□□ 0.42
NELFCD-205ENST00000477741 NYXQ9GZU5 481 aa17.69■□□□□ 0.42
NELFCD-205ENST00000477741 DDX60Q8IY21 1712 aaKnown RBP17.69■□□□□ 0.42
NELFCD-205ENST00000477741 CNBD1Q8NA66 436 aa17.68■□□□□ 0.42
NELFCD-205ENST00000477741 FLAD1Q8NFF5 587 aa17.68■□□□□ 0.42
NELFCD-205ENST00000477741 TFCP2Q12800 502 aa17.68■□□□□ 0.42
NELFCD-205ENST00000477741 SLC10A5Q5PT55 438 aa17.68■□□□□ 0.42
NELFCD-205ENST00000477741 ZBTB47Q9UFB7 747 aaPredicted RBP17.68■□□□□ 0.42
NELFCD-205ENST00000477741 ANKRD18BA2A2Z9 1011 aa17.67■□□□□ 0.42
NELFCD-205ENST00000477741 MMP10P09238 476 aa17.67■□□□□ 0.42
NELFCD-205ENST00000477741 HSP90AB4PQ58FF6 505 aa17.67■□□□□ 0.42
NELFCD-205ENST00000477741 NLGN1Q8N2Q7 840 aa17.67■□□□□ 0.42
NELFCD-205ENST00000477741 EYA2O00167 538 aa17.66■□□□□ 0.42
NELFCD-205ENST00000477741 TAF7LQ5H9L4 462 aa17.66■□□□□ 0.42
NELFCD-205ENST00000477741 ILDR2Q71H61 639 aa17.66■□□□□ 0.42
NELFCD-205ENST00000477741 SLC51AQ86UW1 340 aa17.66■□□□□ 0.42
NELFCD-205ENST00000477741 EAF2Q96CJ1 260 aaPredicted RBP17.66■□□□□ 0.42
NELFCD-205ENST00000477741 TLR7Q9NYK1 1049 aaKnown RBP17.66■□□□□ 0.42
NELFCD-205ENST00000477741 SALL3Q9BXA9 1300 aa17.66■□□□□ 0.42
NELFCD-205ENST00000477741 CCDC152Q4G0S7 254 aa17.65■□□□□ 0.42
NELFCD-205ENST00000477741 SF3B3Q15393 1217 aaKnown RBP17.65■□□□□ 0.42
NELFCD-205ENST00000477741 LDHAL6AQ6ZMR3 332 aa17.65■□□□□ 0.42
NELFCD-205ENST00000477741 PELP1Q8IZL8 1130 aaKnown RBP17.65■□□□□ 0.42
NELFCD-205ENST00000477741 CCDC8Q9H0W5 538 aaPredicted RBP17.65■□□□□ 0.42
NELFCD-205ENST00000477741 TNRC6CQ9HCJ0 1690 aaKnown RBP17.64■□□□□ 0.41
NELFCD-205ENST00000477741 NLRP3Q96P20 1036 aa17.64■□□□□ 0.41
NELFCD-205ENST00000477741 GSPT1P15170 499 aaKnown RBP17.63■□□□□ 0.41
NELFCD-205ENST00000477741 PDE1AP54750 535 aa17.63■□□□□ 0.41
NELFCD-205ENST00000477741 AACSQ86V21 672 aa17.63■□□□□ 0.41
NELFCD-205ENST00000477741 ERC1Q8IUD2 1116 aa17.63■□□□□ 0.41
NELFCD-205ENST00000477741 CELF1Q92879 486 aaKnown RBP17.63■□□□□ 0.41
NELFCD-205ENST00000477741 RIPOR2Q9Y4F9 1068 aa17.63■□□□□ 0.41
NELFCD-205ENST00000477741 MYH3P11055 1940 aa17.63■□□□□ 0.41
NELFCD-205ENST00000477741 SNAP23O00161 211 aa17.62■□□□□ 0.41
NELFCD-205ENST00000477741 IL15P40933 162 aaPredicted RBP17.62■□□□□ 0.41
NELFCD-205ENST00000477741 CLASRPQ8N2M8 674 aaKnown RBP17.62■□□□□ 0.41
NELFCD-205ENST00000477741 HELBQ8NG08 1087 aaPredicted RBP17.62■□□□□ 0.41
NELFCD-205ENST00000477741 CNNM1Q9NRU3 951 aa17.62■□□□□ 0.41
NELFCD-205ENST00000477741 MX1P20591 662 aa17.62■□□□□ 0.41
NELFCD-205ENST00000477741 TNNI3KQ59H18 835 aa17.62■□□□□ 0.41
NELFCD-205ENST00000477741 FPGT-TNNI3KV9GXZ4 949 aa17.62■□□□□ 0.41
NELFCD-205ENST00000477741 LAMB2P55268 1798 aa17.61■□□□□ 0.41
NELFCD-205ENST00000477741 CIAO1O76071 339 aa17.61■□□□□ 0.41
NELFCD-205ENST00000477741 HSP90B1P14625 803 aaKnown RBP17.61■□□□□ 0.41
NELFCD-205ENST00000477741 TIMM10P62072 90 aa17.61■□□□□ 0.41
NELFCD-205ENST00000477741 SRCAPQ6ZRS2 3230 aa17.61■□□□□ 0.41
NELFCD-205ENST00000477741 TAF1P21675 1872 aa17.61■□□□□ 0.41
NELFCD-205ENST00000477741 ST5P78524 1137 aa17.6■□□□□ 0.41
NELFCD-205ENST00000477741 RIC1Q4ADV7 1423 aa17.6■□□□□ 0.41
NELFCD-205ENST00000477741 RTL9Q8NET4 1388 aa17.6■□□□□ 0.41
NELFCD-205ENST00000477741 WTIPA6NIX2 430 aaPredicted RBP17.6■□□□□ 0.41
NELFCD-205ENST00000477741 R3HDM1Q15032 1099 aaKnown RBP17.6■□□□□ 0.41
NELFCD-205ENST00000477741 DBNLQ9UJU6 430 aaKnown RBP17.6■□□□□ 0.41
NELFCD-205ENST00000477741 PARP3Q9Y6F1 533 aa17.6■□□□□ 0.41
NELFCD-205ENST00000477741 TAF5LO75529 589 aa17.59■□□□□ 0.41
NELFCD-205ENST00000477741 IFIT2P09913 472 aaKnown RBP17.59■□□□□ 0.41
NELFCD-205ENST00000477741 C8orf34Q49A92 452 aa17.59■□□□□ 0.41
NELFCD-205ENST00000477741 METTL24Q5JXM2 366 aa17.59■□□□□ 0.41
NELFCD-205ENST00000477741 MPHOSPH8Q99549 860 aa17.59■□□□□ 0.41
NELFCD-205ENST00000477741 DBNDD2Q9BQY9 259 aa17.59■□□□□ 0.41
NELFCD-205ENST00000477741 ZBTB7AO95365 584 aa17.59■□□□□ 0.41
NELFCD-205ENST00000477741 TTC22Q5TAA0 569 aa17.59■□□□□ 0.41
NELFCD-205ENST00000477741 VGLL2Q8N8G2 317 aa17.59■□□□□ 0.41
NELFCD-205ENST00000477741 CEP126Q9P2H0 1117 aa17.59■□□□□ 0.41
NELFCD-205ENST00000477741 PSDA5PKW4 1024 aaPredicted RBP17.58■□□□□ 0.4
NELFCD-205ENST00000477741 MAP4K4O95819 1239 aaPredicted RBP17.58■□□□□ 0.4
NELFCD-205ENST00000477741 IGHMBP2P38935 993 aaKnown RBP17.58■□□□□ 0.4
NELFCD-205ENST00000477741 PI4K2BQ8TCG2 481 aa17.58■□□□□ 0.4
NELFCD-205ENST00000477741 NEUROD6Q96NK8 337 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms