RNA–Protein interactions for RNA: ENST00000477692.6

EXOSC1-209, Transcript of exosome component 1, humanhuman

TSL 5

Gene EXOSC1, Length 480 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-209ENST00000477692 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.64■□□□□ 0.25
EXOSC1-209ENST00000477692 CRAMP1Q96RY5 1269 aa16.64■□□□□ 0.25
EXOSC1-209ENST00000477692 YBX3P16989 372 aaKnown RBP eCLIP16.63■□□□□ 0.254e-8■□□□□ 10.7
EXOSC1-209ENST00000477692 CTSWP56202 376 aa16.63■□□□□ 0.25
EXOSC1-209ENST00000477692 FOXO4P98177 505 aa16.63■□□□□ 0.25
EXOSC1-209ENST00000477692 TTLL11Q8NHH1 800 aa16.63■□□□□ 0.25
EXOSC1-209ENST00000477692 BCS1LQ9Y276 419 aa16.63■□□□□ 0.25
EXOSC1-209ENST00000477692 CSF1RP07333 972 aa16.62■□□□□ 0.25
EXOSC1-209ENST00000477692 CCDC152Q4G0S7 254 aa16.62■□□□□ 0.25
EXOSC1-209ENST00000477692 EPHA10Q5JZY3 1008 aa16.62■□□□□ 0.25
EXOSC1-209ENST00000477692 DDX46Q7L014 1031 aaKnown RBP16.62■□□□□ 0.25
EXOSC1-209ENST00000477692 PELP1Q8IZL8 1130 aaKnown RBP16.62■□□□□ 0.25
EXOSC1-209ENST00000477692 PANK1Q8TE04 598 aa16.62■□□□□ 0.25
EXOSC1-209ENST00000477692 KAZALD1Q96I82 304 aa16.62■□□□□ 0.25
EXOSC1-209ENST00000477692 SUCLG2Q96I99 432 aa16.62■□□□□ 0.25
EXOSC1-209ENST00000477692 COL4A1P02462 1669 aa16.62■□□□□ 0.25
EXOSC1-209ENST00000477692 RTL9Q8NET4 1388 aa16.62■□□□□ 0.25
EXOSC1-209ENST00000477692 GPR162Q16538 588 aa16.61■□□□□ 0.25
EXOSC1-209ENST00000477692 PRPF40BQ6NWY9 871 aaKnown RBP16.61■□□□□ 0.25
EXOSC1-209ENST00000477692 CCDC85AQ96PX6 553 aaPredicted RBP16.61■□□□□ 0.25
EXOSC1-209ENST00000477692 MEIS3Q99687 375 aa16.61■□□□□ 0.25
EXOSC1-209ENST00000477692 RRP1P56182 461 aaKnown RBP16.6■□□□□ 0.25
EXOSC1-209ENST00000477692 GRAPQ13588 217 aa16.6■□□□□ 0.25
EXOSC1-209ENST00000477692 GRAPLQ8TC17 118 aaPredicted RBP16.6■□□□□ 0.25
EXOSC1-209ENST00000477692 GREM2Q9H772 168 aa16.6■□□□□ 0.25
EXOSC1-209ENST00000477692 GNAI3P08754 354 aa16.59■□□□□ 0.25
EXOSC1-209ENST00000477692 UBTFL1P0CB47 393 aaPredicted RBP16.59■□□□□ 0.25
EXOSC1-209ENST00000477692 PDE3AQ14432 1141 aa16.59■□□□□ 0.25
EXOSC1-209ENST00000477692 C20orf194Q5TEA3 1177 aa16.59■□□□□ 0.25
EXOSC1-209ENST00000477692 ITPRIPQ8IWB1 547 aa16.59■□□□□ 0.25
EXOSC1-209ENST00000477692 C7orf43Q8WVR3 580 aa16.59■□□□□ 0.25
EXOSC1-209ENST00000477692 CELF1Q92879 486 aaKnown RBP16.59■□□□□ 0.25
EXOSC1-209ENST00000477692 SEC31BQ9NQW1 1179 aa16.59■□□□□ 0.25
EXOSC1-209ENST00000477692 LRRC37AA6NMS7 1700 aa16.59■□□□□ 0.25
EXOSC1-209ENST00000477692 SPEF2Q9C093 1822 aa16.59■□□□□ 0.25
EXOSC1-209ENST00000477692 DCAF8L1A6NGE4 600 aa16.58■□□□□ 0.24
EXOSC1-209ENST00000477692 PPEF1O14829 653 aaPredicted RBP16.58■□□□□ 0.24
EXOSC1-209ENST00000477692 C21orf2O43822 256 aa16.58■□□□□ 0.24
EXOSC1-209ENST00000477692 BBOX1O75936 387 aa16.58■□□□□ 0.24
EXOSC1-209ENST00000477692 FAM161AQ3B820 660 aa16.58■□□□□ 0.24
EXOSC1-209ENST00000477692 RABL6Q3YEC7 729 aaPredicted RBP16.58■□□□□ 0.24
EXOSC1-209ENST00000477692 LMBR1LQ6UX01 489 aa16.58■□□□□ 0.24
EXOSC1-209ENST00000477692 ANKRD44Q8N8A2 993 aa16.58■□□□□ 0.24
EXOSC1-209ENST00000477692 BICC1Q9H694 974 aaKnown RBP16.58■□□□□ 0.24
EXOSC1-209ENST00000477692 HDAC5Q9UQL6 1122 aa16.58■□□□□ 0.24
EXOSC1-209ENST00000477692 FER1L6Q2WGJ9 1857 aa16.58■□□□□ 0.24
EXOSC1-209ENST00000477692 GOLGB1Q14789 3259 aaKnown RBP16.58■□□□□ 0.24
EXOSC1-209ENST00000477692 ZBTB7BO15156 539 aaPredicted RBP16.57■□□□□ 0.24
EXOSC1-209ENST00000477692 GRIN3BO60391 1043 aa16.57■□□□□ 0.24
EXOSC1-209ENST00000477692 MVPQ14764 893 aaKnown RBP16.57■□□□□ 0.24
EXOSC1-209ENST00000477692 ZNF219Q9P2Y4 722 aaPredicted RBP16.57■□□□□ 0.24
EXOSC1-209ENST00000477692 LRRFIP2Q9Y608 721 aaKnown RBP16.57■□□□□ 0.24
EXOSC1-209ENST00000477692 ITGA6P23229 1130 aa16.56■□□□□ 0.24
EXOSC1-209ENST00000477692 RPS8P62241 208 aaKnown RBP16.56■□□□□ 0.24
EXOSC1-209ENST00000477692 TMC4Q7Z404 712 aa16.56■□□□□ 0.24
EXOSC1-209ENST00000477692 COG6Q9Y2V7 657 aa16.56■□□□□ 0.24
EXOSC1-209ENST00000477692 CHMP3Q9Y3E7 222 aa16.56■□□□□ 0.24
EXOSC1-209ENST00000477692 ATP6V0A2Q9Y487 856 aa16.56■□□□□ 0.24
EXOSC1-209ENST00000477692 SNED1Q8TER0 1413 aa16.55■□□□□ 0.24
EXOSC1-209ENST00000477692 SOGA3Q5TF21 947 aa16.55■□□□□ 0.24
EXOSC1-209ENST00000477692 OLFM4Q6UX06 510 aa16.55■□□□□ 0.24
EXOSC1-209ENST00000477692 SP8Q8IXZ3 490 aa16.55■□□□□ 0.24
EXOSC1-209ENST00000477692 CDC5LQ99459 802 aaKnown RBP16.55■□□□□ 0.24
EXOSC1-209ENST00000477692 DDX19BQ9UMR2 479 aa16.55■□□□□ 0.24
EXOSC1-209ENST00000477692 ANKRD18BA2A2Z9 1011 aa16.54■□□□□ 0.24
EXOSC1-209ENST00000477692 GNAI2P04899 355 aa16.54■□□□□ 0.24
EXOSC1-209ENST00000477692 IFIT5Q13325 482 aaKnown RBP16.54■□□□□ 0.24
EXOSC1-209ENST00000477692 CC2D2BQ6DHV5 1058 aa16.54■□□□□ 0.24
EXOSC1-209ENST00000477692 SLC51AQ86UW1 340 aa16.54■□□□□ 0.24
EXOSC1-209ENST00000477692 ANKRD18AQ8IVF6 992 aa16.54■□□□□ 0.24
EXOSC1-209ENST00000477692 CCDC57Q2TAC2 916 aa16.53■□□□□ 0.24
EXOSC1-209ENST00000477692 CCDC93Q567U6 631 aa16.53■□□□□ 0.24
EXOSC1-209ENST00000477692 ARHGAP27Q6ZUM4 889 aa16.53■□□□□ 0.24
EXOSC1-209ENST00000477692 SBF1O95248 1867 aa16.52■□□□□ 0.24
EXOSC1-209ENST00000477692 IGHMBP2P38935 993 aaKnown RBP16.52■□□□□ 0.24
EXOSC1-209ENST00000477692 GRIPAP1Q4V328 841 aa16.52■□□□□ 0.24
EXOSC1-209ENST00000477692 RTKN2Q8IZC4 609 aa16.52■□□□□ 0.24
EXOSC1-209ENST00000477692 SUPT16HQ9Y5B9 1047 aaKnown RBP16.52■□□□□ 0.24
EXOSC1-209ENST00000477692 LTBP1Q14766 1721 aa16.52■□□□□ 0.24
EXOSC1-209ENST00000477692 UTRNP46939 3433 aa16.52■□□□□ 0.23
EXOSC1-209ENST00000477692 A0A1B0GUL6 1792 aa16.51■□□□□ 0.23
EXOSC1-209ENST00000477692 CCDC88AQ3V6T2 1871 aa16.51■□□□□ 0.23
EXOSC1-209ENST00000477692 NFKBIEO00221 500 aa16.51■□□□□ 0.23
EXOSC1-209ENST00000477692 MTX1Q13505 466 aa16.51■□□□□ 0.23
EXOSC1-209ENST00000477692 ZNF594Q96JF6 807 aaPredicted RBP16.51■□□□□ 0.23
EXOSC1-209ENST00000477692 TMX4Q9H1E5 349 aaPredicted RBP16.51■□□□□ 0.23
EXOSC1-209ENST00000477692 CHMP4BQ9H444 224 aaKnown RBP16.51■□□□□ 0.23
EXOSC1-209ENST00000477692 BSDC1Q9NW68 430 aaPredicted RBP16.51■□□□□ 0.23
EXOSC1-209ENST00000477692 CHD4Q14839 1912 aa16.51■□□□□ 0.23
EXOSC1-209ENST00000477692 RFX5P48382 616 aaPredicted RBP16.5■□□□□ 0.23
EXOSC1-209ENST00000477692 C1orf115Q9H7X2 142 aa16.5■□□□□ 0.23
EXOSC1-209ENST00000477692 ZBTB40Q9NUA8 1239 aa16.5■□□□□ 0.23
EXOSC1-209ENST00000477692 LTBP3Q9NS15 1303 aa16.49■□□□□ 0.23
EXOSC1-209ENST00000477692 TAF7LQ5H9L4 462 aa16.49■□□□□ 0.23
EXOSC1-209ENST00000477692 MPHOSPH8Q99549 860 aa16.49■□□□□ 0.23
EXOSC1-209ENST00000477692 TAOK3Q9H2K8 898 aa16.49■□□□□ 0.23
EXOSC1-209ENST00000477692 DUOX1Q9NRD9 1551 aa16.49■□□□□ 0.23
EXOSC1-209ENST00000477692 GPSM2P81274 684 aa16.48■□□□□ 0.23
EXOSC1-209ENST00000477692 FKBP4Q02790 459 aaKnown RBP eCLIP16.48■□□□□ 0.23
EXOSC1-209ENST00000477692 RASSF7Q02833 373 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms