RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 CLEC4GQ6UXB4 293 aa14.95□□□□□ -0.02
PRPF39-203ENST00000477626 DZIP3Q86Y13 1208 aaKnown RBP14.95□□□□□ -0.02
PRPF39-203ENST00000477626 NUTM1Q86Y26 1132 aa14.95□□□□□ -0.02
PRPF39-203ENST00000477626 IRS2Q9Y4H2 1338 aa14.95□□□□□ -0.02
PRPF39-203ENST00000477626 TNNI3KQ59H18 835 aa14.95□□□□□ -0.02
PRPF39-203ENST00000477626 FPGT-TNNI3KV9GXZ4 949 aa14.95□□□□□ -0.02
PRPF39-203ENST00000477626 QTRT2Q9H974 415 aaKnown RBP14.94□□□□□ -0.02
PRPF39-203ENST00000477626 HSP90AB3PQ58FF7 597 aa14.93□□□□□ -0.02
PRPF39-203ENST00000477626 KIF6Q6ZMV9 814 aa14.93□□□□□ -0.02
PRPF39-203ENST00000477626 C22orf23Q9BZE7 217 aa14.93□□□□□ -0.02
PRPF39-203ENST00000477626 SNX21Q969T3 373 aa14.93□□□□□ -0.02
PRPF39-203ENST00000477626 CTSWP56202 376 aa14.93□□□□□ -0.02
PRPF39-203ENST00000477626 TFCP2Q12800 502 aa14.93□□□□□ -0.02
PRPF39-203ENST00000477626 LRRC24Q50LG9 513 aa14.93□□□□□ -0.02
PRPF39-203ENST00000477626 SLC10A5Q5PT55 438 aa14.93□□□□□ -0.02
PRPF39-203ENST00000477626 ESYT1Q9BSJ8 1104 aa14.93□□□□□ -0.02
PRPF39-203ENST00000477626 CDK5RAP2Q96SN8 1893 aa14.93□□□□□ -0.02
PRPF39-203ENST00000477626 FAM89AQ96GI7 184 aa14.92□□□□□ -0.02
PRPF39-203ENST00000477626 TIAM2Q8IVF5 1701 aa14.92□□□□□ -0.02
PRPF39-203ENST00000477626 DDX60LQ5H9U9 1706 aaKnown RBP14.92□□□□□ -0.02
PRPF39-203ENST00000477626 RPS6KA4O75676 772 aa14.92□□□□□ -0.02
PRPF39-203ENST00000477626 CD2BP2O95400 341 aaKnown RBP14.92□□□□□ -0.02
PRPF39-203ENST00000477626 FGFR2P21802 821 aa14.92□□□□□ -0.02
PRPF39-203ENST00000477626 FAM182BQ5T319 152 aa14.92□□□□□ -0.02
PRPF39-203ENST00000477626 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.92□□□□□ -0.02
PRPF39-203ENST00000477626 ATP5JP18859 108 aa14.92□□□□□ -0.02
PRPF39-203ENST00000477626 TICAM2Q86XR7 235 aa14.92□□□□□ -0.02
PRPF39-203ENST00000477626 PUS3Q9BZE2 481 aaKnown RBP14.92□□□□□ -0.02
PRPF39-203ENST00000477626 SYTL4Q96C24 671 aaPredicted RBP14.91□□□□□ -0.02
PRPF39-203ENST00000477626 ECHDC1Q9NTX5 307 aa14.91□□□□□ -0.02
PRPF39-203ENST00000477626 TBC1D2BQ9UPU7 963 aa14.91□□□□□ -0.02
PRPF39-203ENST00000477626 CHD4Q14839 1912 aa14.91□□□□□ -0.02
PRPF39-203ENST00000477626 EYA2O00167 538 aa14.91□□□□□ -0.02
PRPF39-203ENST00000477626 C3orf67Q6ZVT6 689 aa14.91□□□□□ -0.02
PRPF39-203ENST00000477626 FOCADQ5VW36 1801 aa14.9□□□□□ -0.02
PRPF39-203ENST00000477626 ZNF512BQ96KM6 892 aaPredicted RBP14.9□□□□□ -0.02
PRPF39-203ENST00000477626 TBC1D2Q9BYX2 928 aa14.9□□□□□ -0.02
PRPF39-203ENST00000477626 LSG1Q9H089 658 aaKnown RBP14.9□□□□□ -0.02
PRPF39-203ENST00000477626 GREM2Q9H772 168 aa14.9□□□□□ -0.02
PRPF39-203ENST00000477626 NARFQ9UHQ1 456 aa14.9□□□□□ -0.02
PRPF39-203ENST00000477626 DUOX1Q9NRD9 1551 aa14.9□□□□□ -0.02
PRPF39-203ENST00000477626 KCNQ4P56696 695 aa14.89□□□□□ -0.03
PRPF39-203ENST00000477626 ZNF594Q96JF6 807 aaPredicted RBP14.89□□□□□ -0.03
PRPF39-203ENST00000477626 COL1A1P02452 1464 aaPredicted RBP14.89□□□□□ -0.03
PRPF39-203ENST00000477626 APBB1O00213 710 aa14.89□□□□□ -0.03
PRPF39-203ENST00000477626 SGSM2O43147 1006 aa14.89□□□□□ -0.03
PRPF39-203ENST00000477626 TM4SF1P30408 202 aa14.89□□□□□ -0.03
PRPF39-203ENST00000477626 GLRX3O76003 335 aaKnown RBP14.88□□□□□ -0.03
PRPF39-203ENST00000477626 HAUS7Q99871 368 aa14.88□□□□□ -0.03
PRPF39-203ENST00000477626 IL15P40933 162 aaPredicted RBP14.88□□□□□ -0.03
PRPF39-203ENST00000477626 PARP10Q53GL7 1025 aa14.88□□□□□ -0.03
PRPF39-203ENST00000477626 PDE8AO60658 829 aa14.88□□□□□ -0.03
PRPF39-203ENST00000477626 ANP32AP39687 249 aaKnown RBP14.88□□□□□ -0.03
PRPF39-203ENST00000477626 SMIM5Q71RC9 77 aa14.88□□□□□ -0.03
PRPF39-203ENST00000477626 LAMB1P07942 1786 aa14.87□□□□□ -0.03
PRPF39-203ENST00000477626 MFAP1P55081 439 aaKnown RBP14.87□□□□□ -0.03
PRPF39-203ENST00000477626 SF3B3Q15393 1217 aaKnown RBP14.87□□□□□ -0.03
PRPF39-203ENST00000477626 TBC1D9BQ66K14 1250 aa14.87□□□□□ -0.03
PRPF39-203ENST00000477626 AKT1S1Q96B36 256 aa14.87□□□□□ -0.03
PRPF39-203ENST00000477626 ZNF772Q68DY9 489 aaPredicted RBP14.87□□□□□ -0.03
PRPF39-203ENST00000477626 AACSQ86V21 672 aa14.87□□□□□ -0.03
PRPF39-203ENST00000477626 BRCA1P38398 1863 aaKnown RBP14.86□□□□□ -0.03
PRPF39-203ENST00000477626 IRS4O14654 1257 aaPredicted RBP14.86□□□□□ -0.03
PRPF39-203ENST00000477626 FOXP2O15409 715 aa14.86□□□□□ -0.03
PRPF39-203ENST00000477626 CLASRPQ8N2M8 674 aaKnown RBP14.86□□□□□ -0.03
PRPF39-203ENST00000477626 SLC27A3Q5K4L6 730 aa14.86□□□□□ -0.03
PRPF39-203ENST00000477626 ERC2O15083 957 aa14.86□□□□□ -0.03
PRPF39-203ENST00000477626 DBNDD2Q9BQY9 259 aa14.86□□□□□ -0.03
PRPF39-203ENST00000477626 SIL1Q9H173 461 aa14.86□□□□□ -0.03
PRPF39-203ENST00000477626 ECM29Q5VYK3 1845 aa14.85□□□□□ -0.03
PRPF39-203ENST00000477626 ARHGEF1Q92888 912 aaKnown RBP14.85□□□□□ -0.03
PRPF39-203ENST00000477626 RAD50Q92878 1312 aa14.85□□□□□ -0.03
PRPF39-203ENST00000477626 PSME4Q14997 1843 aa14.85□□□□□ -0.03
PRPF39-203ENST00000477626 RPAP1Q9BWH6 1393 aaPredicted RBP14.85□□□□□ -0.03
PRPF39-203ENST00000477626 GPTP24298 496 aa14.85□□□□□ -0.03
PRPF39-203ENST00000477626 RBM6P78332 1123 aaKnown RBP14.85□□□□□ -0.03
PRPF39-203ENST00000477626 POTEAQ6S8J7 498 aa14.85□□□□□ -0.03
PRPF39-203ENST00000477626 FAM196AQ6ZSG2 479 aa14.85□□□□□ -0.03
PRPF39-203ENST00000477626 DDRGK1Q96HY6 314 aa14.85□□□□□ -0.03
PRPF39-203ENST00000477626 PALD1Q9ULE6 856 aa14.85□□□□□ -0.03
PRPF39-203ENST00000477626 SNED1Q8TER0 1413 aa14.84□□□□□ -0.03
PRPF39-203ENST00000477626 HSPA4P34932 840 aa14.84□□□□□ -0.03
PRPF39-203ENST00000477626 G3BP1Q13283 466 aaKnown RBP eCLIP14.84□□□□□ -0.03
PRPF39-203ENST00000477626 KRT27Q7Z3Y8 459 aa14.84□□□□□ -0.03
PRPF39-203ENST00000477626 PLSCR1O15162 318 aa14.84□□□□□ -0.03
PRPF39-203ENST00000477626 ITGA6P23229 1130 aa14.84□□□□□ -0.03
PRPF39-203ENST00000477626 USPL1Q5W0Q7 1092 aa14.84□□□□□ -0.03
PRPF39-203ENST00000477626 EVI5LQ96CN4 794 aa14.84□□□□□ -0.03
PRPF39-203ENST00000477626 CCDC8Q9H0W5 538 aaPredicted RBP14.84□□□□□ -0.03
PRPF39-203ENST00000477626 SH3TC1Q8TE82 1336 aa14.84□□□□□ -0.03
PRPF39-203ENST00000477626 CCDC88AQ3V6T2 1871 aa14.83□□□□□ -0.03
PRPF39-203ENST00000477626 KLRG2A4D1S0 409 aaPredicted RBP14.83□□□□□ -0.03
PRPF39-203ENST00000477626 CCNL1Q9UK58 526 aaPredicted RBP14.83□□□□□ -0.03
PRPF39-203ENST00000477626 ADRA2BP18089 450 aa14.83□□□□□ -0.04
PRPF39-203ENST00000477626 UTP14AQ9BVJ6 771 aaKnown RBP14.83□□□□□ -0.04
PRPF39-203ENST00000477626 A0A0G2JS52 829 aa14.83□□□□□ -0.04
PRPF39-203ENST00000477626 MYT1Q01538 1121 aa14.83□□□□□ -0.04
PRPF39-203ENST00000477626 MYH15Q9Y2K3 1946 aa14.82□□□□□ -0.04
PRPF39-203ENST00000477626 CHGBP05060 677 aa14.82□□□□□ -0.04
PRPF39-203ENST00000477626 ARID4AP29374 1257 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms