RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 UBTFL1P0CB47 393 aaPredicted RBP19.27■□□□□ 0.68
SEC13-215ENST00000477547 HCLS1P14317 486 aaPredicted RBP19.27■□□□□ 0.68
SEC13-215ENST00000477547 CASP7P55210 303 aa19.27■□□□□ 0.68
SEC13-215ENST00000477547 USP44Q9H0E7 712 aa19.27■□□□□ 0.68
SEC13-215ENST00000477547 DDX19BQ9UMR2 479 aa19.26■□□□□ 0.67
SEC13-215ENST00000477547 BCS1LQ9Y276 419 aa19.26■□□□□ 0.67
SEC13-215ENST00000477547 GNAI3P08754 354 aa19.25■□□□□ 0.67
SEC13-215ENST00000477547 HSP90B1P14625 803 aaKnown RBP19.25■□□□□ 0.67
SEC13-215ENST00000477547 ARHGAP27Q6ZUM4 889 aa19.25■□□□□ 0.67
SEC13-215ENST00000477547 BRIP1Q9BX63 1249 aa19.25■□□□□ 0.67
SEC13-215ENST00000477547 A0A0G2JLW4 131 aa19.25■□□□□ 0.67
SEC13-215ENST00000477547 SUCLG2Q96I99 432 aa19.25■□□□□ 0.67
SEC13-215ENST00000477547 A0A1B0GUL6 1792 aa19.24■□□□□ 0.67
SEC13-215ENST00000477547 PDE8AO60658 829 aa19.24■□□□□ 0.67
SEC13-215ENST00000477547 PDE6BP35913 854 aa19.24■□□□□ 0.67
SEC13-215ENST00000477547 CTSWP56202 376 aa19.24■□□□□ 0.67
SEC13-215ENST00000477547 SLC10A5Q5PT55 438 aa19.24■□□□□ 0.67
SEC13-215ENST00000477547 C3orf67Q6ZVT6 689 aa19.24■□□□□ 0.67
SEC13-215ENST00000477547 KLRG1Q96E93 195 aa19.24■□□□□ 0.67
SEC13-215ENST00000477547 COL4A1P02462 1669 aa19.23■□□□□ 0.67
SEC13-215ENST00000477547 ARFGEF1Q9Y6D6 1849 aa19.23■□□□□ 0.67
SEC13-215ENST00000477547 LRRC37AA6NMS7 1700 aa19.23■□□□□ 0.67
SEC13-215ENST00000477547 NLRP3Q96P20 1036 aa19.23■□□□□ 0.67
SEC13-215ENST00000477547 CRBNQ96SW2 442 aa19.23■□□□□ 0.67
SEC13-215ENST00000477547 PLA2G12BQ9BX93 195 aa19.23■□□□□ 0.67
SEC13-215ENST00000477547 LRRFIP2Q9Y608 721 aaKnown RBP19.22■□□□□ 0.67
SEC13-215ENST00000477547 SLX4Q8IY92 1834 aa19.21■□□□□ 0.67
SEC13-215ENST00000477547 IRX6P78412 446 aaPredicted RBP19.21■□□□□ 0.67
SEC13-215ENST00000477547 CRY2Q49AN0 593 aa19.21■□□□□ 0.67
SEC13-215ENST00000477547 C2CD5Q86YS7 1000 aa19.21■□□□□ 0.67
SEC13-215ENST00000477547 JMYQ8N9B5 988 aa19.21■□□□□ 0.67
SEC13-215ENST00000477547 RBM46Q8TBY0 533 aaKnown RBP19.21■□□□□ 0.67
SEC13-215ENST00000477547 RPGRQ92834 1020 aaKnown RBP19.21■□□□□ 0.67
SEC13-215ENST00000477547 CHMP4BQ9H444 224 aaKnown RBP19.21■□□□□ 0.67
SEC13-215ENST00000477547 BICC1Q9H694 974 aaKnown RBP19.21■□□□□ 0.67
SEC13-215ENST00000477547 C1orf115Q9H7X2 142 aa19.21■□□□□ 0.67
SEC13-215ENST00000477547 HDAC5Q9UQL6 1122 aa19.21■□□□□ 0.67
SEC13-215ENST00000477547 ZBTB7BO15156 539 aaPredicted RBP19.2■□□□□ 0.66
SEC13-215ENST00000477547 GNAI2P04899 355 aa19.2■□□□□ 0.66
SEC13-215ENST00000477547 DPEP1P16444 411 aa19.2■□□□□ 0.66
SEC13-215ENST00000477547 CHRNA5P30532 468 aa19.2■□□□□ 0.66
SEC13-215ENST00000477547 TGFB2P61812 414 aa19.2■□□□□ 0.66
SEC13-215ENST00000477547 EPHA10Q5JZY3 1008 aa19.2■□□□□ 0.66
SEC13-215ENST00000477547 KAZALD1Q96I82 304 aa19.2■□□□□ 0.66
SEC13-215ENST00000477547 CCDC85AQ96PX6 553 aaPredicted RBP19.2■□□□□ 0.66
SEC13-215ENST00000477547 KLRG2A4D1S0 409 aaPredicted RBP19.19■□□□□ 0.66
SEC13-215ENST00000477547 H0YIN7 160 aa19.19■□□□□ 0.66
SEC13-215ENST00000477547 FOXO4P98177 505 aa19.19■□□□□ 0.66
SEC13-215ENST00000477547 FAM161AQ3B820 660 aa19.19■□□□□ 0.66
SEC13-215ENST00000477547 CCDC152Q4G0S7 254 aa19.19■□□□□ 0.66
SEC13-215ENST00000477547 C9orf131Q5VYM1 1079 aa19.19■□□□□ 0.66
SEC13-215ENST00000477547 C16orf71Q8IYS4 520 aaPredicted RBP19.19■□□□□ 0.66
SEC13-215ENST00000477547 TNS4Q8IZW8 715 aa19.19■□□□□ 0.66
SEC13-215ENST00000477547 PDZRN3Q9UPQ7 1066 aa19.19■□□□□ 0.66
SEC13-215ENST00000477547 CHMP3Q9Y3E7 222 aa19.19■□□□□ 0.66
SEC13-215ENST00000477547 RTL9Q8NET4 1388 aa19.18■□□□□ 0.66
SEC13-215ENST00000477547 SRGNP10124 158 aa19.18■□□□□ 0.66
SEC13-215ENST00000477547 SF3B3Q15393 1217 aaKnown RBP19.18■□□□□ 0.66
SEC13-215ENST00000477547 ANKRD44Q8N8A2 993 aa19.18■□□□□ 0.66
SEC13-215ENST00000477547 PCNTO95613 3336 aa19.17■□□□□ 0.66
SEC13-215ENST00000477547 NPR1P16066 1061 aa19.17■□□□□ 0.66
SEC13-215ENST00000477547 RABL6Q3YEC7 729 aaPredicted RBP19.17■□□□□ 0.66
SEC13-215ENST00000477547 LMBR1LQ6UX01 489 aa19.17■□□□□ 0.66
SEC13-215ENST00000477547 TTLL11Q8NHH1 800 aa19.17■□□□□ 0.66
SEC13-215ENST00000477547 GREM2Q9H772 168 aa19.17■□□□□ 0.66
SEC13-215ENST00000477547 ZBTB40Q9NUA8 1239 aa19.17■□□□□ 0.66
SEC13-215ENST00000477547 STYK1Q6J9G0 422 aa19.16■□□□□ 0.66
SEC13-215ENST00000477547 MASTLQ96GX5 879 aa19.16■□□□□ 0.66
SEC13-215ENST00000477547 NEFLP07196 543 aa19.15■□□□□ 0.66
SEC13-215ENST00000477547 CSF1RP07333 972 aa19.15■□□□□ 0.66
SEC13-215ENST00000477547 PRELPP51888 382 aa19.15■□□□□ 0.66
SEC13-215ENST00000477547 DDX46Q7L014 1031 aaKnown RBP19.15■□□□□ 0.66
SEC13-215ENST00000477547 ZNF622Q969S3 477 aaKnown RBP eCLIP19.15■□□□□ 0.66
SEC13-215ENST00000477547 RBM17Q96I25 401 aaKnown RBP19.15■□□□□ 0.66
SEC13-215ENST00000477547 HOXA10P31260 410 aaPredicted RBP19.14■□□□□ 0.65
SEC13-215ENST00000477547 FSTL1Q12841 308 aa19.14■□□□□ 0.65
SEC13-215ENST00000477547 EXOC6Q8TAG9 804 aa19.14■□□□□ 0.65
SEC13-215ENST00000477547 LTBP1Q14766 1721 aa19.13■□□□□ 0.65
SEC13-215ENST00000477547 KCNA3P22001 575 aa19.13■□□□□ 0.65
SEC13-215ENST00000477547 ITGA6P23229 1130 aa19.13■□□□□ 0.65
SEC13-215ENST00000477547 RRAGCQ9HB90 399 aa19.13■□□□□ 0.65
SEC13-215ENST00000477547 SEC31BQ9NQW1 1179 aa19.13■□□□□ 0.65
SEC13-215ENST00000477547 ANKRD18BA2A2Z9 1011 aa19.12■□□□□ 0.65
SEC13-215ENST00000477547 IFIT5Q13325 482 aaKnown RBP19.12■□□□□ 0.65
SEC13-215ENST00000477547 MTX1Q13505 466 aa19.12■□□□□ 0.65
SEC13-215ENST00000477547 GRAPQ13588 217 aa19.12■□□□□ 0.65
SEC13-215ENST00000477547 CCDC57Q2TAC2 916 aa19.12■□□□□ 0.65
SEC13-215ENST00000477547 GRAPLQ8TC17 118 aaPredicted RBP19.12■□□□□ 0.65
SEC13-215ENST00000477547 CNKSR1Q969H4 720 aa19.12■□□□□ 0.65
SEC13-215ENST00000477547 CRAMP1Q96RY5 1269 aa19.12■□□□□ 0.65
SEC13-215ENST00000477547 CDC5LQ99459 802 aaKnown RBP19.12■□□□□ 0.65
SEC13-215ENST00000477547 FER1L6Q2WGJ9 1857 aa19.12■□□□□ 0.65
SEC13-215ENST00000477547 SRGAP3O43295 1099 aa19.11■□□□□ 0.65
SEC13-215ENST00000477547 TAF7LQ5H9L4 462 aa19.11■□□□□ 0.65
SEC13-215ENST00000477547 PRPF40BQ6NWY9 871 aaKnown RBP19.11■□□□□ 0.65
SEC13-215ENST00000477547 CEP85Q6P2H3 762 aa19.11■□□□□ 0.65
SEC13-215ENST00000477547 PIM2Q9P1W9 311 aa19.11■□□□□ 0.65
SEC13-215ENST00000477547 PPEF1O14829 653 aaPredicted RBP19.1■□□□□ 0.65
SEC13-215ENST00000477547 CELF1Q92879 486 aaKnown RBP19.1■□□□□ 0.65
SEC13-215ENST00000477547 RNF181Q9P0P0 153 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms