RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 TBC1D8BQ0IIM8 1120 aa5.9□□□□□ -1.46
TARDBP-208ENST00000477447 PDE12Q6L8Q7 609 aaKnown RBP5.9□□□□□ -1.46
TARDBP-208ENST00000477447 SYT9Q86SS6 491 aa5.9□□□□□ -1.46
TARDBP-208ENST00000477447 NLRP13Q86W25 1043 aa5.9□□□□□ -1.46
TARDBP-208ENST00000477447 ZSCAN29Q8IWY8 852 aaPredicted RBP5.9□□□□□ -1.46
TARDBP-208ENST00000477447 ASB16Q96NS5 453 aa5.9□□□□□ -1.46
TARDBP-208ENST00000477447 CITED4Q96RK1 184 aa5.9□□□□□ -1.46
TARDBP-208ENST00000477447 C11orf16Q9NQ32 467 aa5.9□□□□□ -1.46
TARDBP-208ENST00000477447 TMEM63CQ9P1W3 806 aa5.9□□□□□ -1.46
TARDBP-208ENST00000477447 ZFATQ9P243 1243 aa5.9□□□□□ -1.46
TARDBP-208ENST00000477447 NEURL1BA8MQ27 555 aa5.89□□□□□ -1.47
TARDBP-208ENST00000477447 ARAFP10398 606 aa5.89□□□□□ -1.47
TARDBP-208ENST00000477447 ADH6P28332 368 aa5.89□□□□□ -1.47
TARDBP-208ENST00000477447 TTC39BQ5VTQ0 682 aaPredicted RBP5.89□□□□□ -1.47
TARDBP-208ENST00000477447 OXCT2Q9BYC2 517 aaPredicted RBP5.89□□□□□ -1.47
TARDBP-208ENST00000477447 IGFLR1Q9H665 355 aa5.89□□□□□ -1.47
TARDBP-208ENST00000477447 ELP3Q9H9T3 547 aa5.89□□□□□ -1.47
TARDBP-208ENST00000477447 AVENQ9NQS1 362 aaPredicted RBP5.89□□□□□ -1.47
TARDBP-208ENST00000477447 ABI2Q9NYB9 513 aaPredicted RBP5.89□□□□□ -1.47
TARDBP-208ENST00000477447 GGA1Q9UJY5 639 aa5.89□□□□□ -1.47
TARDBP-208ENST00000477447 MMP20O60882 483 aa5.88□□□□□ -1.47
TARDBP-208ENST00000477447 SIN3BO75182 1162 aa5.88□□□□□ -1.47
TARDBP-208ENST00000477447 LCE2AQ5TA79 106 aaPredicted RBP5.88□□□□□ -1.47
TARDBP-208ENST00000477447 SNX29Q8TEQ0 813 aa5.88□□□□□ -1.47
TARDBP-208ENST00000477447 DMRTB1Q96MA1 342 aa5.88□□□□□ -1.47
TARDBP-208ENST00000477447 UBE2OQ9C0C9 1292 aaKnown RBP5.88□□□□□ -1.47
TARDBP-208ENST00000477447 EFCC1Q9HA90 598 aa5.88□□□□□ -1.47
TARDBP-208ENST00000477447 FOXD3Q9UJU5 478 aaPredicted RBP5.88□□□□□ -1.47
TARDBP-208ENST00000477447 ANKRD33BA6NCL7 494 aa5.87□□□□□ -1.47
TARDBP-208ENST00000477447 PHACTR2O75167 634 aa5.87□□□□□ -1.47
TARDBP-208ENST00000477447 TNFRSF21O75509 655 aa5.87□□□□□ -1.47
TARDBP-208ENST00000477447 IGHA2P01877 340 aa5.87□□□□□ -1.47
TARDBP-208ENST00000477447 PSAPP07602 524 aa5.87□□□□□ -1.47
TARDBP-208ENST00000477447 XKR5Q6UX68 686 aa5.87□□□□□ -1.47
TARDBP-208ENST00000477447 DNAJC14Q6Y2X3 702 aaPredicted RBP5.87□□□□□ -1.47
TARDBP-208ENST00000477447 SLCO4C1Q6ZQN7 724 aa5.87□□□□□ -1.47
TARDBP-208ENST00000477447 DHX32Q7L7V1 743 aaKnown RBP5.87□□□□□ -1.47
TARDBP-208ENST00000477447 FCHSD1Q86WN1 690 aa5.87□□□□□ -1.47
TARDBP-208ENST00000477447 GOLGA6L1Q8N7Z2 621 aa5.87□□□□□ -1.47
TARDBP-208ENST00000477447 ACDQ96AP0 544 aa5.87□□□□□ -1.47
TARDBP-208ENST00000477447 NIF3L1Q9GZT8 377 aa5.87□□□□□ -1.47
TARDBP-208ENST00000477447 KLF15Q9UIH9 416 aa5.87□□□□□ -1.47
TARDBP-208ENST00000477447 GDF2Q9UK05 429 aaPredicted RBP5.87□□□□□ -1.47
TARDBP-208ENST00000477447 CCDC9Q9Y3X0 531 aaKnown RBP5.87□□□□□ -1.47
TARDBP-208ENST00000477447 PHF20L1A8MW92 1017 aa5.86□□□□□ -1.47
TARDBP-208ENST00000477447 TREHO43280 583 aa5.86□□□□□ -1.47
TARDBP-208ENST00000477447 MAP3K6O95382 1288 aa5.86□□□□□ -1.47
TARDBP-208ENST00000477447 CYP2E1P05181 493 aaPredicted RBP5.86□□□□□ -1.47
TARDBP-208ENST00000477447 SLURP2P0DP57 97 aa5.86□□□□□ -1.47
TARDBP-208ENST00000477447 MLLT1Q03111 559 aaPredicted RBP5.86□□□□□ -1.47
TARDBP-208ENST00000477447 PLAURQ03405 335 aa5.86□□□□□ -1.47
TARDBP-208ENST00000477447 ORC1Q13415 861 aa5.86□□□□□ -1.47
TARDBP-208ENST00000477447 C1orf127Q8N9H9 656 aa5.86□□□□□ -1.47
TARDBP-208ENST00000477447 OR13H1Q8NG92 308 aa5.86□□□□□ -1.47
TARDBP-208ENST00000477447 NSUN5Q96P11 429 aaKnown RBP5.86□□□□□ -1.47
TARDBP-208ENST00000477447 DNAJB12Q9NXW2 375 aaKnown RBP5.86□□□□□ -1.47
TARDBP-208ENST00000477447 TLR7Q9NYK1 1049 aaKnown RBP5.86□□□□□ -1.47
TARDBP-208ENST00000477447 CNTN3Q9P232 1028 aa5.86□□□□□ -1.47
TARDBP-208ENST00000477447 KANSL3Q9P2N6 904 aa5.86□□□□□ -1.47
TARDBP-208ENST00000477447 NEFLP07196 543 aa5.85□□□□□ -1.47
TARDBP-208ENST00000477447 ADH7P40394 386 aa5.85□□□□□ -1.47
TARDBP-208ENST00000477447 MAPK8P45983 427 aa5.85□□□□□ -1.47
TARDBP-208ENST00000477447 GPLD1P80108 840 aa5.85□□□□□ -1.47
TARDBP-208ENST00000477447 TNFRSF25Q93038 417 aa5.85□□□□□ -1.47
TARDBP-208ENST00000477447 ALKBH8Q96BT7 664 aaKnown RBP5.85□□□□□ -1.47
TARDBP-208ENST00000477447 CHRDQ9H2X0 955 aa5.85□□□□□ -1.47
TARDBP-208ENST00000477447 P4HBP07237 508 aaKnown RBP5.84□□□□□ -1.47
TARDBP-208ENST00000477447 CES1P23141 567 aa5.84□□□□□ -1.47
TARDBP-208ENST00000477447 SOX18P35713 384 aa5.84□□□□□ -1.47
TARDBP-208ENST00000477447 NRLP54845 237 aa5.84□□□□□ -1.47
TARDBP-208ENST00000477447 PLCB3Q01970 1234 aa5.84□□□□□ -1.47
TARDBP-208ENST00000477447 FMR1Q06787 632 aaKnown RBP eCLIP5.84□□□□□ -1.47
TARDBP-208ENST00000477447 HFE2Q6ZVN8 426 aa5.84□□□□□ -1.47
TARDBP-208ENST00000477447 NPAS4Q8IUM7 802 aa5.84□□□□□ -1.47
TARDBP-208ENST00000477447 SVOPQ8N4V2 548 aa5.84□□□□□ -1.47
TARDBP-208ENST00000477447 WHAMMQ8TF30 809 aa5.84□□□□□ -1.47
TARDBP-208ENST00000477447 SLC6A14Q9UN76 642 aa5.84□□□□□ -1.47
TARDBP-208ENST00000477447 ELOA3CA0A087WX78 387 aaPredicted RBP5.83□□□□□ -1.48
TARDBP-208ENST00000477447 PNMA6FA0A0J9YX94 578 aa5.83□□□□□ -1.48
TARDBP-208ENST00000477447 ELOA3DA6NLF2 546 aaPredicted RBP5.83□□□□□ -1.48
TARDBP-208ENST00000477447 ADARB2-AS1A8MUL3 147 aa5.83□□□□□ -1.48
TARDBP-208ENST00000477447 EIF1AYO14602 144 aaKnown RBP5.83□□□□□ -1.48
TARDBP-208ENST00000477447 EREGO14944 169 aa5.83□□□□□ -1.48
TARDBP-208ENST00000477447 WIPF1O43516 503 aa5.83□□□□□ -1.48
TARDBP-208ENST00000477447 CPNE3O75131 537 aaKnown RBP5.83□□□□□ -1.48
TARDBP-208ENST00000477447 POLR3DP05423 398 aaPredicted RBP5.83□□□□□ -1.48
TARDBP-208ENST00000477447 CELA2BP08218 269 aaPredicted RBP5.83□□□□□ -1.48
TARDBP-208ENST00000477447 BCRP11274 1271 aa5.83□□□□□ -1.48
TARDBP-208ENST00000477447 EPXP11678 715 aa5.83□□□□□ -1.48
TARDBP-208ENST00000477447 CPB1P15086 417 aa5.83□□□□□ -1.48
TARDBP-208ENST00000477447 EIF2AK2P19525 551 aaKnown RBP5.83□□□□□ -1.48
TARDBP-208ENST00000477447 MAP3K10Q02779 954 aa5.83□□□□□ -1.48
TARDBP-208ENST00000477447 HYAL2Q12891 473 aa5.83□□□□□ -1.48
TARDBP-208ENST00000477447 DSC3Q14574 896 aa5.83□□□□□ -1.48
TARDBP-208ENST00000477447 ELOA3BQ3SY89 546 aa5.83□□□□□ -1.48
TARDBP-208ENST00000477447 COL13A1Q5TAT6 717 aaPredicted RBP5.83□□□□□ -1.48
TARDBP-208ENST00000477447 USPL1Q5W0Q7 1092 aa5.83□□□□□ -1.48
TARDBP-208ENST00000477447 LYPD4Q6UWN0 246 aa5.83□□□□□ -1.48
TARDBP-208ENST00000477447 C1orf229Q6ZS94 237 aaPredicted RBP5.83□□□□□ -1.48
TARDBP-208ENST00000477447 FAM35AQ86V20 835 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms