RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 PPP1R42Q7Z4L9 355 aa11.63□□□□□ -0.55
PGK1-204ENST00000477335 NBPF5PQ86XG9 351 aaPredicted RBP11.63□□□□□ -0.55
PGK1-204ENST00000477335 NLGN1Q8N2Q7 840 aa11.63□□□□□ -0.55
PGK1-204ENST00000477335 CSF1RP07333 972 aa11.62□□□□□ -0.55
PGK1-204ENST00000477335 RFX5P48382 616 aaPredicted RBP11.62□□□□□ -0.55
PGK1-204ENST00000477335 CTSWP56202 376 aa11.62□□□□□ -0.55
PGK1-204ENST00000477335 HDAC1Q13547 482 aaPredicted RBP11.62□□□□□ -0.55
PGK1-204ENST00000477335 LMBR1LQ6UX01 489 aa11.62□□□□□ -0.55
PGK1-204ENST00000477335 RPAP2Q8IXW5 612 aaPredicted RBP11.62□□□□□ -0.55
PGK1-204ENST00000477335 SSH3Q8TE77 659 aa11.62□□□□□ -0.55
PGK1-204ENST00000477335 CCDC85AQ96PX6 553 aaPredicted RBP11.62□□□□□ -0.55
PGK1-204ENST00000477335 CHMP4BQ9H444 224 aaKnown RBP11.62□□□□□ -0.55
PGK1-204ENST00000477335 PDE8AO60658 829 aa11.61□□□□□ -0.55
PGK1-204ENST00000477335 ZBTB7AO95365 584 aa11.61□□□□□ -0.55
PGK1-204ENST00000477335 FAM161AQ3B820 660 aa11.61□□□□□ -0.55
PGK1-204ENST00000477335 SLC10A5Q5PT55 438 aa11.61□□□□□ -0.55
PGK1-204ENST00000477335 TTLL11Q8NHH1 800 aa11.61□□□□□ -0.55
PGK1-204ENST00000477335 KLHDC4Q8TBB5 520 aa11.61□□□□□ -0.55
PGK1-204ENST00000477335 CCDC136Q96JN2 1154 aa11.61□□□□□ -0.55
PGK1-204ENST00000477335 PA2G4Q9UQ80 394 aaKnown RBP11.61□□□□□ -0.55
PGK1-204ENST00000477335 ANKRD31Q8N7Z5 1873 aa11.6□□□□□ -0.55
PGK1-204ENST00000477335 SRGAP3O43295 1099 aa11.6□□□□□ -0.55
PGK1-204ENST00000477335 TPTE2Q6XPS3 522 aa11.6□□□□□ -0.55
PGK1-204ENST00000477335 SLC51AQ86UW1 340 aa11.6□□□□□ -0.55
PGK1-204ENST00000477335 SKAP1Q86WV1 359 aa11.6□□□□□ -0.55
PGK1-204ENST00000477335 CNBD1Q8NA66 436 aa11.6□□□□□ -0.55
PGK1-204ENST00000477335 NYXQ9GZU5 481 aa11.6□□□□□ -0.55
PGK1-204ENST00000477335 GREM2Q9H772 168 aa11.6□□□□□ -0.55
PGK1-204ENST00000477335 LRP5O75197 1615 aa11.6□□□□□ -0.55
PGK1-204ENST00000477335 RIC1Q4ADV7 1423 aa11.6□□□□□ -0.55
PGK1-204ENST00000477335 SLC16A10Q8TF71 515 aa11.59□□□□□ -0.55
PGK1-204ENST00000477335 SGIP1Q9BQI5 828 aa11.59□□□□□ -0.55
PGK1-204ENST00000477335 SEC31BQ9NQW1 1179 aa11.59□□□□□ -0.55
PGK1-204ENST00000477335 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.59□□□□□ -0.55
PGK1-204ENST00000477335 PTPN12Q05209 780 aaKnown RBP11.58□□□□□ -0.56
PGK1-204ENST00000477335 SF3B3Q15393 1217 aaKnown RBP11.58□□□□□ -0.56
PGK1-204ENST00000477335 SMC5Q8IY18 1101 aa11.58□□□□□ -0.56
PGK1-204ENST00000477335 ZNF594Q96JF6 807 aaPredicted RBP11.58□□□□□ -0.56
PGK1-204ENST00000477335 DCTPP1Q9H773 170 aa11.58□□□□□ -0.56
PGK1-204ENST00000477335 CHMP3Q9Y3E7 222 aa11.58□□□□□ -0.56
PGK1-204ENST00000477335 PARP3Q9Y6F1 533 aa11.58□□□□□ -0.56
PGK1-204ENST00000477335 COL11A2P13942 1736 aaPredicted RBP11.57□□□□□ -0.56
PGK1-204ENST00000477335 MYH3P11055 1940 aa11.57□□□□□ -0.56
PGK1-204ENST00000477335 ITGA6P23229 1130 aa11.57□□□□□ -0.56
PGK1-204ENST00000477335 PUS3Q9BZE2 481 aaKnown RBP11.57□□□□□ -0.56
PGK1-204ENST00000477335 MTFR1LQ9H019 292 aa11.57□□□□□ -0.56
PGK1-204ENST00000477335 RWDD1Q9H446 243 aaPredicted RBP11.57□□□□□ -0.56
PGK1-204ENST00000477335 EXOC6BQ9Y2D4 811 aa11.57□□□□□ -0.56
PGK1-204ENST00000477335 C10orf71Q711Q0 1435 aa11.57□□□□□ -0.56
PGK1-204ENST00000477335 RTL9Q8NET4 1388 aa11.56□□□□□ -0.56
PGK1-204ENST00000477335 KLRG2A4D1S0 409 aaPredicted RBP11.56□□□□□ -0.56
PGK1-204ENST00000477335 GTF2E1P29083 439 aaPredicted RBP11.56□□□□□ -0.56
PGK1-204ENST00000477335 PTGER2P43116 358 aa11.56□□□□□ -0.56
PGK1-204ENST00000477335 CRY2Q49AN0 593 aa11.56□□□□□ -0.56
PGK1-204ENST00000477335 CENPQQ7L2Z9 268 aaPredicted RBP11.56□□□□□ -0.56
PGK1-204ENST00000477335 SIL1Q9H173 461 aa11.56□□□□□ -0.56
PGK1-204ENST00000477335 COPRSQ9NQ92 184 aa11.56□□□□□ -0.56
PGK1-204ENST00000477335 HDAC5Q9UQL6 1122 aa11.56□□□□□ -0.56
PGK1-204ENST00000477335 NOP58Q9Y2X3 529 aaKnown RBP11.56□□□□□ -0.56
PGK1-204ENST00000477335 TAF1P21675 1872 aa11.55□□□□□ -0.56
PGK1-204ENST00000477335 SPDYE4A6NLX3 237 aa11.55□□□□□ -0.56
PGK1-204ENST00000477335 SMARCA5O60264 1052 aaPredicted RBP11.55□□□□□ -0.56
PGK1-204ENST00000477335 HMMRO75330 724 aa11.55□□□□□ -0.56
PGK1-204ENST00000477335 ST5P78524 1137 aa11.55□□□□□ -0.56
PGK1-204ENST00000477335 CCDC152Q4G0S7 254 aa11.55□□□□□ -0.56
PGK1-204ENST00000477335 LRRC24Q50LG9 513 aa11.55□□□□□ -0.56
PGK1-204ENST00000477335 ATG9AQ7Z3C6 839 aa11.55□□□□□ -0.56
PGK1-204ENST00000477335 CELF1Q92879 486 aaKnown RBP11.55□□□□□ -0.56
PGK1-204ENST00000477335 PDZRN3Q9UPQ7 1066 aa11.55□□□□□ -0.56
PGK1-204ENST00000477335 SPDYE2BA6NHP3 402 aa11.54□□□□□ -0.56
PGK1-204ENST00000477335 APBB1O00213 710 aa11.54□□□□□ -0.56
PGK1-204ENST00000477335 SOCS7O14512 581 aa11.54□□□□□ -0.56
PGK1-204ENST00000477335 NPHP1O15259 732 aa11.54□□□□□ -0.56
PGK1-204ENST00000477335 SURF6O75683 361 aaKnown RBP11.54□□□□□ -0.56
PGK1-204ENST00000477335 SASH1O94885 1247 aa11.54□□□□□ -0.56
PGK1-204ENST00000477335 SPDYE6P0CI01 402 aa11.54□□□□□ -0.56
PGK1-204ENST00000477335 PDE4AP27815 886 aa11.54□□□□□ -0.56
PGK1-204ENST00000477335 SPDYE2Q495Y8 402 aa11.54□□□□□ -0.56
PGK1-204ENST00000477335 NLRP3Q96P20 1036 aa11.54□□□□□ -0.56
PGK1-204ENST00000477335 BRIP1Q9BX63 1249 aa11.54□□□□□ -0.56
PGK1-204ENST00000477335 KIAA1551Q9HCM1 1747 aa11.54□□□□□ -0.56
PGK1-204ENST00000477335 ANKRD18BA2A2Z9 1011 aa11.53□□□□□ -0.56
PGK1-204ENST00000477335 CHRNA5P30532 468 aa11.53□□□□□ -0.56
PGK1-204ENST00000477335 IFIT5Q13325 482 aaKnown RBP11.53□□□□□ -0.56
PGK1-204ENST00000477335 CCDC57Q2TAC2 916 aa11.53□□□□□ -0.56
PGK1-204ENST00000477335 SPEF2Q9C093 1822 aa11.53□□□□□ -0.56
PGK1-204ENST00000477335 KIF13BQ9NQT8 1826 aa11.52□□□□□ -0.57
PGK1-204ENST00000477335 EYA2O00167 538 aa11.52□□□□□ -0.57
PGK1-204ENST00000477335 SRGNP10124 158 aa11.52□□□□□ -0.57
PGK1-204ENST00000477335 NUCB1Q02818 461 aa11.52□□□□□ -0.57
PGK1-204ENST00000477335 C16orf71Q8IYS4 520 aaPredicted RBP11.52□□□□□ -0.57
PGK1-204ENST00000477335 OTUD7AQ8TE49 926 aaPredicted RBP11.52□□□□□ -0.57
PGK1-204ENST00000477335 GCC1Q96CN9 775 aa11.52□□□□□ -0.57
PGK1-204ENST00000477335 RIPOR2Q9Y4F9 1068 aa11.52□□□□□ -0.57
PGK1-204ENST00000477335 CIAO1O76071 339 aa11.51□□□□□ -0.57
PGK1-204ENST00000477335 HSP90B1P14625 803 aaKnown RBP11.51□□□□□ -0.57
PGK1-204ENST00000477335 HOXA10P31260 410 aaPredicted RBP11.51□□□□□ -0.57
PGK1-204ENST00000477335 TFCP2Q12800 502 aa11.51□□□□□ -0.57
PGK1-204ENST00000477335 ANKRD45Q5TZF3 282 aa11.51□□□□□ -0.57
PGK1-204ENST00000477335 C2CD5Q86YS7 1000 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms