RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 CNKSR1Q969H4 720 aa18.18■□□□□ 0.5
CCNL1-217ENST00000476367 KAZALD1Q96I82 304 aa18.18■□□□□ 0.5
CCNL1-217ENST00000476367 CHD4Q14839 1912 aa18.18■□□□□ 0.5
CCNL1-217ENST00000476367 SPEF2Q9C093 1822 aa18.18■□□□□ 0.5
CCNL1-217ENST00000476367 COL4A1P02462 1669 aa18.17■□□□□ 0.5
CCNL1-217ENST00000476367 CCT4P50991 539 aaKnown RBP18.17■□□□□ 0.5
CCNL1-217ENST00000476367 PDE3AQ14432 1141 aa18.17■□□□□ 0.5
CCNL1-217ENST00000476367 GRM8O00222 908 aa18.16■□□□□ 0.5
CCNL1-217ENST00000476367 PDE8AO60658 829 aa18.16■□□□□ 0.5
CCNL1-217ENST00000476367 MEIS3Q99687 375 aa18.16■□□□□ 0.5
CCNL1-217ENST00000476367 C9orf78Q9NZ63 289 aaPredicted RBP18.16■□□□□ 0.5
CCNL1-217ENST00000476367 GRIN3BO60391 1043 aa18.16■□□□□ 0.5
CCNL1-217ENST00000476367 HSP90B1P14625 803 aaKnown RBP18.16■□□□□ 0.5
CCNL1-217ENST00000476367 RBM17Q96I25 401 aaKnown RBP18.16■□□□□ 0.5
CCNL1-217ENST00000476367 CCDC85AQ96PX6 553 aaPredicted RBP18.16■□□□□ 0.5
CCNL1-217ENST00000476367 ZBTB7BO15156 539 aaPredicted RBP18.15■□□□□ 0.5
CCNL1-217ENST00000476367 C21orf2O43822 256 aa18.15■□□□□ 0.5
CCNL1-217ENST00000476367 COG6Q9Y2V7 657 aa18.15■□□□□ 0.5
CCNL1-217ENST00000476367 FER1L6Q2WGJ9 1857 aa18.15■□□□□ 0.5
CCNL1-217ENST00000476367 ALDH1B1P30837 517 aa18.14■□□□□ 0.49
CCNL1-217ENST00000476367 HOXA10P31260 410 aaPredicted RBP18.14■□□□□ 0.49
CCNL1-217ENST00000476367 CTSWP56202 376 aa18.14■□□□□ 0.49
CCNL1-217ENST00000476367 EPHA10Q5JZY3 1008 aa18.14■□□□□ 0.49
CCNL1-217ENST00000476367 DDX46Q7L014 1031 aaKnown RBP18.14■□□□□ 0.49
CCNL1-217ENST00000476367 MVPQ14764 893 aaKnown RBP18.13■□□□□ 0.49
CCNL1-217ENST00000476367 SF3B3Q15393 1217 aaKnown RBP18.13■□□□□ 0.49
CCNL1-217ENST00000476367 FTSJ3Q8IY81 847 aaKnown RBP18.13■□□□□ 0.49
CCNL1-217ENST00000476367 CRAMP1Q96RY5 1269 aa18.13■□□□□ 0.49
CCNL1-217ENST00000476367 CCDC88AQ3V6T2 1871 aa18.13■□□□□ 0.49
CCNL1-217ENST00000476367 CCDC152Q4G0S7 254 aa18.12■□□□□ 0.49
CCNL1-217ENST00000476367 OLFM4Q6UX06 510 aa18.12■□□□□ 0.49
CCNL1-217ENST00000476367 ARHGAP27Q6ZUM4 889 aa18.12■□□□□ 0.49
CCNL1-217ENST00000476367 SLC51AQ86UW1 340 aa18.12■□□□□ 0.49
CCNL1-217ENST00000476367 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.12■□□□□ 0.49
CCNL1-217ENST00000476367 PPEF1O14829 653 aaPredicted RBP18.12■□□□□ 0.49
CCNL1-217ENST00000476367 FOXO4P98177 505 aa18.12■□□□□ 0.49
CCNL1-217ENST00000476367 ITPRIPQ8IWB1 547 aa18.12■□□□□ 0.49
CCNL1-217ENST00000476367 SUCLG2Q96I99 432 aa18.12■□□□□ 0.49
CCNL1-217ENST00000476367 LRRC37AA6NMS7 1700 aa18.11■□□□□ 0.49
CCNL1-217ENST00000476367 PLA2G12BQ9BX93 195 aa18.11■□□□□ 0.49
CCNL1-217ENST00000476367 SEC31BQ9NQW1 1179 aa18.11■□□□□ 0.49
CCNL1-217ENST00000476367 SBF1O95248 1867 aa18.11■□□□□ 0.49
CCNL1-217ENST00000476367 RASSF7Q02833 373 aa18.1■□□□□ 0.49
CCNL1-217ENST00000476367 GRAPQ13588 217 aa18.1■□□□□ 0.49
CCNL1-217ENST00000476367 TTLL11Q8NHH1 800 aa18.1■□□□□ 0.49
CCNL1-217ENST00000476367 GRAPLQ8TC17 118 aaPredicted RBP18.1■□□□□ 0.49
CCNL1-217ENST00000476367 CELF1Q92879 486 aaKnown RBP18.1■□□□□ 0.49
CCNL1-217ENST00000476367 CENPBP07199 599 aaPredicted RBP18.09■□□□□ 0.49
CCNL1-217ENST00000476367 FAM161AQ3B820 660 aa18.09■□□□□ 0.49
CCNL1-217ENST00000476367 GREM2Q9H772 168 aa18.09■□□□□ 0.49
CCNL1-217ENST00000476367 ZBTB40Q9NUA8 1239 aa18.09■□□□□ 0.49
CCNL1-217ENST00000476367 CHMP3Q9Y3E7 222 aa18.09■□□□□ 0.49
CCNL1-217ENST00000476367 MS4A1P11836 297 aa18.09■□□□□ 0.49
CCNL1-217ENST00000476367 CCDC93Q567U6 631 aa18.09■□□□□ 0.49
CCNL1-217ENST00000476367 ANKRD44Q8N8A2 993 aa18.09■□□□□ 0.49
CCNL1-217ENST00000476367 CRBNQ96SW2 442 aa18.09■□□□□ 0.49
CCNL1-217ENST00000476367 CSF1RP07333 972 aa18.08■□□□□ 0.48
CCNL1-217ENST00000476367 SOGA3Q5TF21 947 aa18.08■□□□□ 0.48
CCNL1-217ENST00000476367 C7orf43Q8WVR3 580 aa18.08■□□□□ 0.48
CCNL1-217ENST00000476367 TIAM2Q8IVF5 1701 aa18.07■□□□□ 0.48
CCNL1-217ENST00000476367 NFKBIEO00221 500 aa18.07■□□□□ 0.48
CCNL1-217ENST00000476367 IRX6P78412 446 aaPredicted RBP18.07■□□□□ 0.48
CCNL1-217ENST00000476367 RABL6Q3YEC7 729 aaPredicted RBP18.07■□□□□ 0.48
CCNL1-217ENST00000476367 BICC1Q9H694 974 aaKnown RBP18.07■□□□□ 0.48
CCNL1-217ENST00000476367 RTL9Q8NET4 1388 aa18.07■□□□□ 0.48
CCNL1-217ENST00000476367 UBTFL1P0CB47 393 aaPredicted RBP18.06■□□□□ 0.48
CCNL1-217ENST00000476367 LMBR1LQ6UX01 489 aa18.06■□□□□ 0.48
CCNL1-217ENST00000476367 LRRFIP2Q9Y608 721 aaKnown RBP18.06■□□□□ 0.48
CCNL1-217ENST00000476367 SNED1Q8TER0 1413 aa18.06■□□□□ 0.48
CCNL1-217ENST00000476367 BBOX1O75936 387 aa18.05■□□□□ 0.48
CCNL1-217ENST00000476367 ITGA6P23229 1130 aa18.05■□□□□ 0.48
CCNL1-217ENST00000476367 CDC5LQ99459 802 aaKnown RBP18.05■□□□□ 0.48
CCNL1-217ENST00000476367 TAOK3Q9H2K8 898 aa18.05■□□□□ 0.48
CCNL1-217ENST00000476367 C1orf115Q9H7X2 142 aa18.05■□□□□ 0.48
CCNL1-217ENST00000476367 DDX19BQ9UMR2 479 aa18.05■□□□□ 0.48
CCNL1-217ENST00000476367 ATP6V0A2Q9Y487 856 aa18.05■□□□□ 0.48
CCNL1-217ENST00000476367 DICER1Q9UPY3 1922 aaKnown RBP18.05■□□□□ 0.48
CCNL1-217ENST00000476367 RPS8P62241 208 aaKnown RBP18.05■□□□□ 0.48
CCNL1-217ENST00000476367 ANKRD18AQ8IVF6 992 aa18.05■□□□□ 0.48
CCNL1-217ENST00000476367 TMX4Q9H1E5 349 aaPredicted RBP18.05■□□□□ 0.48
CCNL1-217ENST00000476367 GNAI3P08754 354 aa18.04■□□□□ 0.48
CCNL1-217ENST00000476367 EXOC6Q8TAG9 804 aa18.04■□□□□ 0.48
CCNL1-217ENST00000476367 A0A1B0GUL6 1792 aa18.04■□□□□ 0.48
CCNL1-217ENST00000476367 CC2D2BQ6DHV5 1058 aa18.03■□□□□ 0.48
CCNL1-217ENST00000476367 RTKN2Q8IZC4 609 aa18.03■□□□□ 0.48
CCNL1-217ENST00000476367 LTBP1Q14766 1721 aa18.03■□□□□ 0.48
CCNL1-217ENST00000476367 DUOX1Q9NRD9 1551 aa18.03■□□□□ 0.48
CCNL1-217ENST00000476367 ANKRD18BA2A2Z9 1011 aa18.02■□□□□ 0.48
CCNL1-217ENST00000476367 PRELPP51888 382 aa18.02■□□□□ 0.48
CCNL1-217ENST00000476367 IFIT5Q13325 482 aaKnown RBP18.02■□□□□ 0.48
CCNL1-217ENST00000476367 TMC4Q7Z404 712 aa18.02■□□□□ 0.48
CCNL1-217ENST00000476367 SIRT2Q8IXJ6 389 aa18.02■□□□□ 0.48
CCNL1-217ENST00000476367 SP8Q8IXZ3 490 aa18.02■□□□□ 0.48
CCNL1-217ENST00000476367 RNF181Q9P0P0 153 aa18.02■□□□□ 0.48
CCNL1-217ENST00000476367 FKBP4Q02790 459 aaKnown RBP eCLIP18.01■□□□□ 0.47
CCNL1-217ENST00000476367 CCDC57Q2TAC2 916 aa18.01■□□□□ 0.47
CCNL1-217ENST00000476367 LTBP3Q9NS15 1303 aa18.01■□□□□ 0.47
CCNL1-217ENST00000476367 PNMA6EA0A0J9YXQ4 647 aa18.01■□□□□ 0.47
CCNL1-217ENST00000476367 GNAI2P04899 355 aa18.01■□□□□ 0.47
CCNL1-217ENST00000476367 LMNB1P20700 586 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms