RNA–Protein interactions for RNA: ENST00000476350.1

MACF1-216, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 5,304 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-216ENST00000476350 CCDC57Q2TAC2 916 aa9.99□□□□□ -0.81
MACF1-216ENST00000476350 CAVIN4Q5BKX8 364 aa9.99□□□□□ -0.81
MACF1-216ENST00000476350 PI4K2BQ8TCG2 481 aa9.99□□□□□ -0.81
MACF1-216ENST00000476350 DIAPH3Q9NSV4 1193 aa9.99□□□□□ -0.81
MACF1-216ENST00000476350 TECPR2O15040 1411 aa9.99□□□□□ -0.81
MACF1-216ENST00000476350 IFIT2P09913 472 aaKnown RBP9.99□□□□□ -0.81
MACF1-216ENST00000476350 ROBO2Q9HCK4 1378 aa9.99□□□□□ -0.81
MACF1-216ENST00000476350 B4DLN1 442 aa9.99□□□□□ -0.81
MACF1-216ENST00000476350 TNNI2P48788 182 aa9.99□□□□□ -0.81
MACF1-216ENST00000476350 MRPL12P52815 198 aaKnown RBP9.99□□□□□ -0.81
MACF1-216ENST00000476350 CBX1P83916 185 aa9.99□□□□□ -0.81
MACF1-216ENST00000476350 DNM1Q05193 864 aaKnown RBP9.99□□□□□ -0.81
MACF1-216ENST00000476350 RUFY2Q8WXA3 655 aa9.99□□□□□ -0.81
MACF1-216ENST00000476350 FLT4P35916 1363 aa9.99□□□□□ -0.81
MACF1-216ENST00000476350 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.99□□□□□ -0.81
MACF1-216ENST00000476350 RHPN1Q8TCX5 695 aa9.99□□□□□ -0.81
MACF1-216ENST00000476350 CCDC192P0DO97 292 aa9.98□□□□□ -0.81
MACF1-216ENST00000476350 TPTE2Q6XPS3 522 aa9.98□□□□□ -0.81
MACF1-216ENST00000476350 JAKMIP1Q96N16 626 aaKnown RBP9.98□□□□□ -0.81
MACF1-216ENST00000476350 VPS37CA5D8V6 355 aaPredicted RBP9.98□□□□□ -0.81
MACF1-216ENST00000476350 NRDCO43847 1150 aa9.98□□□□□ -0.81
MACF1-216ENST00000476350 ATP6V1AP38606 617 aa9.98□□□□□ -0.81
MACF1-216ENST00000476350 DMTNQ08495 405 aa9.98□□□□□ -0.81
MACF1-216ENST00000476350 WASHC4Q2M389 1173 aa9.98□□□□□ -0.81
MACF1-216ENST00000476350 KCNF1Q9H3M0 494 aa9.98□□□□□ -0.81
MACF1-216ENST00000476350 H0YIN7 160 aa9.98□□□□□ -0.81
MACF1-216ENST00000476350 LARGE1O95461 756 aa9.98□□□□□ -0.81
MACF1-216ENST00000476350 LDHCP07864 332 aa9.98□□□□□ -0.81
MACF1-216ENST00000476350 CPA1P15085 419 aa9.98□□□□□ -0.81
MACF1-216ENST00000476350 DRC7Q8IY82 874 aa9.98□□□□□ -0.81
MACF1-216ENST00000476350 ZSCAN31Q96LW9 406 aaPredicted RBP9.98□□□□□ -0.81
MACF1-216ENST00000476350 HYPKQ9NX55 129 aa9.98□□□□□ -0.81
MACF1-216ENST00000476350 SPDYE4A6NLX3 237 aa9.98□□□□□ -0.81
MACF1-216ENST00000476350 FAM98CQ17RN3 349 aaKnown RBP9.98□□□□□ -0.81
MACF1-216ENST00000476350 PRPF40BQ6NWY9 871 aaKnown RBP9.98□□□□□ -0.81
MACF1-216ENST00000476350 MAP3K5Q99683 1374 aa9.98□□□□□ -0.81
MACF1-216ENST00000476350 SRGAP3O43295 1099 aa9.97□□□□□ -0.81
MACF1-216ENST00000476350 POLA2Q14181 598 aa9.97□□□□□ -0.81
MACF1-216ENST00000476350 SSH3Q8TE77 659 aa9.97□□□□□ -0.81
MACF1-216ENST00000476350 KIF1BPQ96EK5 621 aa9.97□□□□□ -0.81
MACF1-216ENST00000476350 PYCARDQ9ULZ3 195 aa9.97□□□□□ -0.81
MACF1-216ENST00000476350 CAMK4Q16566 473 aa9.97□□□□□ -0.81
MACF1-216ENST00000476350 RASEFQ8IZ41 740 aa9.97□□□□□ -0.81
MACF1-216ENST00000476350 ANKRD24Q8TF21 1146 aa9.97□□□□□ -0.81
MACF1-216ENST00000476350 USP44Q9H0E7 712 aa9.97□□□□□ -0.81
MACF1-216ENST00000476350 ZNF219Q9P2Y4 722 aaPredicted RBP9.97□□□□□ -0.81
MACF1-216ENST00000476350 CYP46A1Q9Y6A2 500 aa9.97□□□□□ -0.81
MACF1-216ENST00000476350 AGLP35573 1532 aa9.97□□□□□ -0.81
MACF1-216ENST00000476350 BTBD11A6QL63 1104 aa9.97□□□□□ -0.81
MACF1-216ENST00000476350 CCDC158Q5M9N0 1113 aa9.97□□□□□ -0.81
MACF1-216ENST00000476350 EYA1Q99502 592 aa9.97□□□□□ -0.81
MACF1-216ENST00000476350 PTCD1O75127 700 aaKnown RBP9.97□□□□□ -0.81
MACF1-216ENST00000476350 CHRNA2Q15822 529 aa9.97□□□□□ -0.81
MACF1-216ENST00000476350 ZSCAN25Q6NSZ9 544 aa9.97□□□□□ -0.81
MACF1-216ENST00000476350 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.97□□□□□ -0.816e-7■■■■□ 20
MACF1-216ENST00000476350 CRYBG1Q9Y4K1 1723 aa9.97□□□□□ -0.81
MACF1-216ENST00000476350 DNAI2Q9GZS0 605 aa9.97□□□□□ -0.81
MACF1-216ENST00000476350 PHAXQ9H814 394 aaKnown RBP9.97□□□□□ -0.81
MACF1-216ENST00000476350 BCL2L12Q9HB09 334 aa9.97□□□□□ -0.81
MACF1-216ENST00000476350 SH2B1Q9NRF2 756 aaPredicted RBP9.97□□□□□ -0.81
MACF1-216ENST00000476350 AP5Z1O43299 807 aa9.96□□□□□ -0.81
MACF1-216ENST00000476350 UTP14CQ5TAP6 766 aaKnown RBP9.96□□□□□ -0.81
MACF1-216ENST00000476350 PDCL2Q8N4E4 241 aa9.96□□□□□ -0.81
MACF1-216ENST00000476350 FUCA2Q9BTY2 467 aa9.96□□□□□ -0.81
MACF1-216ENST00000476350 PRM3Q9NNZ6 103 aa9.96□□□□□ -0.81
MACF1-216ENST00000476350 IGSF1Q8N6C5 1336 aa9.96□□□□□ -0.81
MACF1-216ENST00000476350 CRACR2BQ8N4Y2 399 aaPredicted RBP9.96□□□□□ -0.82
MACF1-216ENST00000476350 ZHX1Q9UKY1 873 aaPredicted RBP9.96□□□□□ -0.82
MACF1-216ENST00000476350 RIOK3O14730 519 aaKnown RBP9.96□□□□□ -0.82
MACF1-216ENST00000476350 IFIT1P09914 478 aaKnown RBP9.96□□□□□ -0.82
MACF1-216ENST00000476350 SART3Q15020 963 aaKnown RBP9.96□□□□□ -0.82
MACF1-216ENST00000476350 TAF7Q15545 349 aaPredicted RBP9.96□□□□□ -0.82
MACF1-216ENST00000476350 HDGFL1Q5TGJ6 251 aa9.96□□□□□ -0.82
MACF1-216ENST00000476350 NLRP3Q96P20 1036 aa9.96□□□□□ -0.82
MACF1-216ENST00000476350 NUP62CLQ9H1M0 184 aa9.96□□□□□ -0.82
MACF1-216ENST00000476350 MTMR6Q9Y217 621 aa9.96□□□□□ -0.82
MACF1-216ENST00000476350 TTC41PQ6P2S7 1318 aa9.95□□□□□ -0.82
MACF1-216ENST00000476350 PLEKHG3A1L390 1219 aa9.95□□□□□ -0.82
MACF1-216ENST00000476350 DTNBO60941 627 aa9.95□□□□□ -0.82
MACF1-216ENST00000476350 MAP3K11Q16584 847 aa9.95□□□□□ -0.82
MACF1-216ENST00000476350 WDR78Q5VTH9 848 aa9.95□□□□□ -0.82
MACF1-216ENST00000476350 NACAP1Q9BZK3 213 aa9.95□□□□□ -0.82
MACF1-216ENST00000476350 KDRP35968 1356 aa9.95□□□□□ -0.82
MACF1-216ENST00000476350 PTH1RQ03431 593 aa9.95□□□□□ -0.82
MACF1-216ENST00000476350 ATP2B3Q16720 1220 aa9.95□□□□□ -0.82
MACF1-216ENST00000476350 ARHGAP27Q6ZUM4 889 aa9.95□□□□□ -0.82
MACF1-216ENST00000476350 CCDC47Q96A33 483 aaKnown RBP9.95□□□□□ -0.82
MACF1-216ENST00000476350 TMEM94Q12767 1356 aa9.94□□□□□ -0.82
MACF1-216ENST00000476350 ERC1Q8IUD2 1116 aa9.94□□□□□ -0.82
MACF1-216ENST00000476350 NEUROD6Q96NK8 337 aa9.94□□□□□ -0.82
MACF1-216ENST00000476350 TSPOAP1O95153 1857 aa9.94□□□□□ -0.82
MACF1-216ENST00000476350 PTGS1P23219 599 aa9.94□□□□□ -0.82
MACF1-216ENST00000476350 NECAB1Q8N987 351 aa9.94□□□□□ -0.82
MACF1-216ENST00000476350 DIP2BQ9P265 1576 aa9.94□□□□□ -0.82
MACF1-216ENST00000476350 TMEM132AQ24JP5 1023 aa9.94□□□□□ -0.82
MACF1-216ENST00000476350 NLGN1Q8N2Q7 840 aa9.94□□□□□ -0.82
MACF1-216ENST00000476350 KIAA1524Q8TCG1 905 aa9.94□□□□□ -0.82
MACF1-216ENST00000476350 ACSBG1Q96GR2 724 aa9.94□□□□□ -0.82
MACF1-216ENST00000476350 TNMDQ9H2S6 317 aa9.94□□□□□ -0.82
MACF1-216ENST00000476350 MRVI1Q9Y6F6 885 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms