RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 SLC27A2O14975 620 aa19.15■□□□□ 0.66
VARS2-207ENST00000476162 ATG9AQ7Z3C6 839 aa19.15■□□□□ 0.66
VARS2-207ENST00000476162 PIGBQ92521 554 aa19.15■□□□□ 0.66
VARS2-207ENST00000476162 NHSL1Q5SYE7 1610 aa19.15■□□□□ 0.66
VARS2-207ENST00000476162 NUP188Q5SRE5 1749 aa19.15■□□□□ 0.66
VARS2-207ENST00000476162 LARGE1O95461 756 aa19.15■□□□□ 0.66
VARS2-207ENST00000476162 DNAJC2Q99543 621 aaKnown RBP19.15■□□□□ 0.66
VARS2-207ENST00000476162 WDR33Q9C0J8 1336 aaKnown RBP19.14■□□□□ 0.65
VARS2-207ENST00000476162 FGD1P98174 961 aa19.14■□□□□ 0.65
VARS2-207ENST00000476162 CCDC9Q9Y3X0 531 aaKnown RBP19.14■□□□□ 0.65
VARS2-207ENST00000476162 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.14■□□□□ 0.65
VARS2-207ENST00000476162 ZSCAN23Q3MJ62 389 aa19.13■□□□□ 0.65
VARS2-207ENST00000476162 FOXD4L6Q3SYB3 417 aaPredicted RBP19.13■□□□□ 0.65
VARS2-207ENST00000476162 FOXD4L3Q6VB84 417 aaPredicted RBP19.13■□□□□ 0.65
VARS2-207ENST00000476162 HAUS7Q99871 368 aa19.13■□□□□ 0.65
VARS2-207ENST00000476162 TOGARAM1Q9Y4F4 1720 aa19.13■□□□□ 0.65
VARS2-207ENST00000476162 RPAP1Q9BWH6 1393 aaPredicted RBP19.13■□□□□ 0.65
VARS2-207ENST00000476162 DNAJC10Q8IXB1 793 aa19.13■□□□□ 0.65
VARS2-207ENST00000476162 CHGBP05060 677 aa19.12■□□□□ 0.65
VARS2-207ENST00000476162 ZNF445P59923 1031 aa19.12■□□□□ 0.65
VARS2-207ENST00000476162 COL9A3Q14050 684 aaPredicted RBP19.12■□□□□ 0.65
VARS2-207ENST00000476162 ZNF594Q96JF6 807 aaPredicted RBP19.12■□□□□ 0.65
VARS2-207ENST00000476162 NEUROD6Q96NK8 337 aa19.12■□□□□ 0.65
VARS2-207ENST00000476162 ISCA1Q9BUE6 129 aa19.12■□□□□ 0.65
VARS2-207ENST00000476162 RBM27Q9P2N5 1060 aaKnown RBP19.12■□□□□ 0.65
VARS2-207ENST00000476162 NSFL1CQ9UNZ2 370 aaKnown RBP19.12■□□□□ 0.65
VARS2-207ENST00000476162 TAF5LO75529 589 aa19.12■□□□□ 0.65
VARS2-207ENST00000476162 TIMM10P62072 90 aa19.12■□□□□ 0.65
VARS2-207ENST00000476162 TCIRG1Q13488 830 aa19.12■□□□□ 0.65
VARS2-207ENST00000476162 LRRC24Q50LG9 513 aa19.12■□□□□ 0.65
VARS2-207ENST00000476162 RNF20Q5VTR2 975 aa19.12■□□□□ 0.65
VARS2-207ENST00000476162 CCDC83Q8IWF9 413 aa19.12■□□□□ 0.65
VARS2-207ENST00000476162 ATG3Q9NT62 314 aa19.12■□□□□ 0.65
VARS2-207ENST00000476162 SMC3Q9UQE7 1217 aa19.12■□□□□ 0.65
VARS2-207ENST00000476162 TAF6LQ9Y6J9 622 aa19.12■□□□□ 0.65
VARS2-207ENST00000476162 TJP1Q07157 1748 aa19.11■□□□□ 0.65
VARS2-207ENST00000476162 IL15P40933 162 aaPredicted RBP19.11■□□□□ 0.65
VARS2-207ENST00000476162 DDX46Q7L014 1031 aaKnown RBP19.11■□□□□ 0.65
VARS2-207ENST00000476162 EYA2O00167 538 aa19.1■□□□□ 0.65
VARS2-207ENST00000476162 PSMA5P28066 241 aa19.1■□□□□ 0.65
VARS2-207ENST00000476162 ZSCAN31Q96LW9 406 aaPredicted RBP19.1■□□□□ 0.65
VARS2-207ENST00000476162 TEX13AQ9BXU3 409 aaPredicted RBP19.1■□□□□ 0.65
VARS2-207ENST00000476162 TRIM44Q96DX7 344 aaPredicted RBP19.1■□□□□ 0.65
VARS2-207ENST00000476162 SH2B1Q9NRF2 756 aaPredicted RBP19.1■□□□□ 0.65
VARS2-207ENST00000476162 JCADQ9P266 1359 aa19.1■□□□□ 0.65
VARS2-207ENST00000476162 DTNBO60941 627 aa19.09■□□□□ 0.65
VARS2-207ENST00000476162 SYT1P21579 422 aa19.09■□□□□ 0.65
VARS2-207ENST00000476162 ME3Q16798 604 aa19.09■□□□□ 0.65
VARS2-207ENST00000476162 SEC62Q99442 399 aaKnown RBP19.09■□□□□ 0.65
VARS2-207ENST00000476162 GPR108Q9NPR9 543 aa19.09■□□□□ 0.65
VARS2-207ENST00000476162 PUS3Q9BZE2 481 aaKnown RBP19.09■□□□□ 0.65
VARS2-207ENST00000476162 ZNF609O15014 1411 aa19.08■□□□□ 0.65
VARS2-207ENST00000476162 STX6O43752 255 aa19.08■□□□□ 0.65
VARS2-207ENST00000476162 STARD3NLO95772 234 aa19.08■□□□□ 0.65
VARS2-207ENST00000476162 ST3GAL1Q11201 340 aa19.08■□□□□ 0.65
VARS2-207ENST00000476162 BLOC1S2Q6QNY1 142 aa19.08■□□□□ 0.65
VARS2-207ENST00000476162 KIF6Q6ZMV9 814 aa19.08■□□□□ 0.65
VARS2-207ENST00000476162 CCDC129Q6ZRS4 1044 aa19.08■□□□□ 0.65
VARS2-207ENST00000476162 GDPD2Q9HCC8 539 aa19.08■□□□□ 0.65
VARS2-207ENST00000476162 TMEM63CQ9P1W3 806 aa19.08■□□□□ 0.65
VARS2-207ENST00000476162 TPCN1Q9ULQ1 816 aa19.08■□□□□ 0.65
VARS2-207ENST00000476162 ZSCAN22P10073 491 aaPredicted RBP19.08■□□□□ 0.64
VARS2-207ENST00000476162 GJB2P29033 226 aa19.08■□□□□ 0.64
VARS2-207ENST00000476162 USPL1Q5W0Q7 1092 aa19.08■□□□□ 0.64
VARS2-207ENST00000476162 KBTBD3Q8NAB2 608 aa19.08■□□□□ 0.64
VARS2-207ENST00000476162 TCEANC2Q96MN5 208 aa19.08■□□□□ 0.64
VARS2-207ENST00000476162 HMG20BQ9P0W2 317 aa19.08■□□□□ 0.64
VARS2-207ENST00000476162 RFX7Q2KHR2 1363 aa19.08■□□□□ 0.64
VARS2-207ENST00000476162 CIAO1O76071 339 aa19.07■□□□□ 0.64
VARS2-207ENST00000476162 MBD3O95983 291 aa19.07■□□□□ 0.64
VARS2-207ENST00000476162 TRIM28Q13263 835 aaKnown RBP19.07■□□□□ 0.64
VARS2-207ENST00000476162 TSGA10IPQ3SY00 556 aa19.07■□□□□ 0.64
VARS2-207ENST00000476162 MCMDC2Q4G0Z9 681 aa19.07■□□□□ 0.64
VARS2-207ENST00000476162 NECAB1Q8N987 351 aa19.07■□□□□ 0.64
VARS2-207ENST00000476162 GOLIM4O00461 696 aa19.06■□□□□ 0.64
VARS2-207ENST00000476162 CCDC57Q2TAC2 916 aa19.06■□□□□ 0.64
VARS2-207ENST00000476162 FAM89AQ96GI7 184 aa19.06■□□□□ 0.64
VARS2-207ENST00000476162 A0A1B0GUL7 405 aa19.06■□□□□ 0.64
VARS2-207ENST00000476162 RPS6KB1P23443 525 aa19.06■□□□□ 0.64
VARS2-207ENST00000476162 TERF1P54274 439 aa19.06■□□□□ 0.64
VARS2-207ENST00000476162 MAP7D2Q96T17 732 aa19.06■□□□□ 0.64
VARS2-207ENST00000476162 PAG1Q9NWQ8 432 aa19.06■□□□□ 0.64
VARS2-207ENST00000476162 NASPP49321 788 aaPredicted RBP19.05■□□□□ 0.64
VARS2-207ENST00000476162 USP48Q86UV5 1035 aa19.05■□□□□ 0.64
VARS2-207ENST00000476162 CCDC85AQ96PX6 553 aaPredicted RBP19.05■□□□□ 0.64
VARS2-207ENST00000476162 DISP2A7MBM2 1401 aa19.05■□□□□ 0.64
VARS2-207ENST00000476162 PRIM1P49642 420 aaKnown RBP19.05■□□□□ 0.64
VARS2-207ENST00000476162 GADD45BO75293 160 aaPredicted RBP19.04■□□□□ 0.64
VARS2-207ENST00000476162 PCCAP05165 728 aaPredicted RBP19.04■□□□□ 0.64
VARS2-207ENST00000476162 SLFNL1Q499Z3 407 aa19.04■□□□□ 0.64
VARS2-207ENST00000476162 SLC4A9Q96Q91 983 aa19.04■□□□□ 0.64
VARS2-207ENST00000476162 MAP3K15Q6ZN16 1313 aa19.04■□□□□ 0.64
VARS2-207ENST00000476162 OFD1O75665 1012 aa19.04■□□□□ 0.64
VARS2-207ENST00000476162 F13A1P00488 732 aa19.04■□□□□ 0.64
VARS2-207ENST00000476162 ANKRD1Q15327 319 aa19.04■□□□□ 0.64
VARS2-207ENST00000476162 HLFQ16534 295 aa19.04■□□□□ 0.64
VARS2-207ENST00000476162 ZBTB38Q8NAP3 1195 aaPredicted RBP19.04■□□□□ 0.64
VARS2-207ENST00000476162 SYTL4Q96C24 671 aaPredicted RBP19.04■□□□□ 0.64
VARS2-207ENST00000476162 CEP126Q9P2H0 1117 aa19.04■□□□□ 0.64
VARS2-207ENST00000476162 U3KPZ7 1027 aaPredicted RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms