RNA–Protein interactions for RNA: ENST00000476126.1

SP140-209, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 463 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-209ENST00000476126 PSMD1Q99460 953 aa8.9□□□□□ -0.98
SP140-209ENST00000476126 COL4A1P02462 1669 aa8.9□□□□□ -0.98
SP140-209ENST00000476126 COL4A5P29400 1685 aa8.9□□□□□ -0.98
SP140-209ENST00000476126 DUOX1Q9NRD9 1551 aa8.9□□□□□ -0.99
SP140-209ENST00000476126 ADAMTSL1Q8N6G6 1762 aa8.89□□□□□ -0.99
SP140-209ENST00000476126 ZNF541Q9H0D2 1346 aa8.89□□□□□ -0.99
SP140-209ENST00000476126 IQCA1LA6NCM1 817 aa8.89□□□□□ -0.99
SP140-209ENST00000476126 IRS4O14654 1257 aaPredicted RBP8.89□□□□□ -0.99
SP140-209ENST00000476126 PPIP5K2O43314 1243 aa8.89□□□□□ -0.99
SP140-209ENST00000476126 HSP90B1P14625 803 aaKnown RBP8.89□□□□□ -0.99
SP140-209ENST00000476126 APLP1P51693 650 aa8.89□□□□□ -0.99
SP140-209ENST00000476126 EIF6P56537 245 aaKnown RBP8.89□□□□□ -0.99
SP140-209ENST00000476126 FSTL1Q12841 308 aa8.89□□□□□ -0.99
SP140-209ENST00000476126 GRAPQ13588 217 aa8.89□□□□□ -0.99
SP140-209ENST00000476126 DPP8Q6V1X1 898 aaPredicted RBP8.89□□□□□ -0.99
SP140-209ENST00000476126 WDR63Q8IWG1 891 aa8.89□□□□□ -0.99
SP140-209ENST00000476126 NIM1KQ8IY84 436 aa8.89□□□□□ -0.99
SP140-209ENST00000476126 SUPT20HQ8NEM7 779 aa8.89□□□□□ -0.99
SP140-209ENST00000476126 GRAPLQ8TC17 118 aaPredicted RBP8.89□□□□□ -0.99
SP140-209ENST00000476126 CWC25Q9NXE8 425 aaPredicted RBP8.89□□□□□ -0.99
SP140-209ENST00000476126 MAP3K2Q9Y2U5 619 aa8.89□□□□□ -0.99
SP140-209ENST00000476126 ATP6V0A2Q9Y487 856 aa8.89□□□□□ -0.99
SP140-209ENST00000476126 GJA3Q9Y6H8 435 aa8.89□□□□□ -0.99
SP140-209ENST00000476126 BBOX1O75936 387 aa8.88□□□□□ -0.99
SP140-209ENST00000476126 SLC4A2P04920 1241 aa8.88□□□□□ -0.99
SP140-209ENST00000476126 FKBP5Q13451 457 aaPredicted RBP8.88□□□□□ -0.99
SP140-209ENST00000476126 SLC51AQ86UW1 340 aa8.88□□□□□ -0.99
SP140-209ENST00000476126 MPNDQ8N594 471 aa8.88□□□□□ -0.99
SP140-209ENST00000476126 ZBTB38Q8NAP3 1195 aaPredicted RBP8.88□□□□□ -0.99
SP140-209ENST00000476126 CCDC191Q8NCU4 936 aa8.88□□□□□ -0.99
SP140-209ENST00000476126 METTL22Q9BUU2 404 aaPredicted RBP8.88□□□□□ -0.99
SP140-209ENST00000476126 MYH16Q9H6N6 1097 aa8.88□□□□□ -0.99
SP140-209ENST00000476126 CEP350Q5VT06 3117 aa8.88□□□□□ -0.99
SP140-209ENST00000476126 POLR2AP24928 1970 aaKnown RBP8.87□□□□□ -0.99
SP140-209ENST00000476126 SCN9AQ15858 1988 aa8.87□□□□□ -0.99
SP140-209ENST00000476126 PI4KAP2A4QPH2 592 aa8.87□□□□□ -0.99
SP140-209ENST00000476126 LMOD1P29536 600 aaPredicted RBP8.87□□□□□ -0.99
SP140-209ENST00000476126 EXOSC9Q06265 439 aaKnown RBP8.87□□□□□ -0.99
SP140-209ENST00000476126 AOC3Q16853 763 aa8.87□□□□□ -0.99
SP140-209ENST00000476126 EAPPQ56P03 285 aaPredicted RBP8.87□□□□□ -0.99
SP140-209ENST00000476126 KSR2Q6VAB6 950 aa8.87□□□□□ -0.99
SP140-209ENST00000476126 TMC4Q7Z404 712 aa8.87□□□□□ -0.99
SP140-209ENST00000476126 SP8Q8IXZ3 490 aa8.87□□□□□ -0.99
SP140-209ENST00000476126 PI4KAP1Q8N8J0 262 aa8.87□□□□□ -0.99
SP140-209ENST00000476126 HACL1Q9UJ83 578 aa8.87□□□□□ -0.99
SP140-209ENST00000476126 MYH13Q9UKX3 1938 aa8.87□□□□□ -0.99
SP140-209ENST00000476126 FZD9O00144 591 aa8.86□□□□□ -0.99
SP140-209ENST00000476126 PDE8AO60658 829 aa8.86□□□□□ -0.99
SP140-209ENST00000476126 PCCAP05165 728 aaPredicted RBP8.86□□□□□ -0.99
SP140-209ENST00000476126 FLIIQ13045 1269 aa8.86□□□□□ -0.99
SP140-209ENST00000476126 TRIM28Q13263 835 aaKnown RBP8.86□□□□□ -0.99
SP140-209ENST00000476126 SF3B3Q15393 1217 aaKnown RBP8.86□□□□□ -0.99
SP140-209ENST00000476126 CCDC152Q4G0S7 254 aa8.86□□□□□ -0.99
SP140-209ENST00000476126 G2E3Q7L622 706 aa8.86□□□□□ -0.99
SP140-209ENST00000476126 GPC2Q8N158 579 aa8.86□□□□□ -0.99
SP140-209ENST00000476126 JARID2Q92833 1246 aaPredicted RBP8.86□□□□□ -0.99
SP140-209ENST00000476126 CELF1Q92879 486 aaKnown RBP8.86□□□□□ -0.99
SP140-209ENST00000476126 CCDC85AQ96PX6 553 aaPredicted RBP8.86□□□□□ -0.99
SP140-209ENST00000476126 CLEC11AQ9Y240 323 aa8.86□□□□□ -0.99
SP140-209ENST00000476126 CDHR2Q9BYE9 1310 aa8.85□□□□□ -0.99
SP140-209ENST00000476126 POTECB2RU33 542 aa8.85□□□□□ -0.99
SP140-209ENST00000476126 C6orf229H3BNL8 230 aa8.85□□□□□ -0.99
SP140-209ENST00000476126 EPHX2P34913 555 aa8.85□□□□□ -0.99
SP140-209ENST00000476126 CWF19L2Q2TBE0 894 aaKnown RBP8.85□□□□□ -0.99
SP140-209ENST00000476126 CHADLQ6NUI6 762 aa8.85□□□□□ -0.99
SP140-209ENST00000476126 L3MBTL3Q96JM7 780 aaPredicted RBP8.85□□□□□ -0.99
SP140-209ENST00000476126 TAF1DQ9H5J8 278 aaPredicted RBP8.85□□□□□ -0.99
SP140-209ENST00000476126 NSFL1CQ9UNZ2 370 aaKnown RBP8.85□□□□□ -0.99
SP140-209ENST00000476126 ZNF646O15015 1829 aaPredicted RBP8.84□□□□□ -0.99
SP140-209ENST00000476126 ECM29Q5VYK3 1845 aa8.84□□□□□ -0.99
SP140-209ENST00000476126 NEURL1BA8MQ27 555 aa8.84□□□□□ -0.99
SP140-209ENST00000476126 G3V3G9 751 aa8.84□□□□□ -0.99
SP140-209ENST00000476126 VAMP4O75379 141 aa8.84□□□□□ -0.99
SP140-209ENST00000476126 POTEIP0CG38 1075 aa8.84□□□□□ -0.99
SP140-209ENST00000476126 POTEJP0CG39 1038 aa8.84□□□□□ -0.99
SP140-209ENST00000476126 HTRA3P83110 453 aa8.84□□□□□ -0.99
SP140-209ENST00000476126 DCAF8Q5TAQ9 597 aa8.84□□□□□ -0.99
SP140-209ENST00000476126 UBE3BQ7Z3V4 1068 aa8.84□□□□□ -0.99
SP140-209ENST00000476126 LDHDQ86WU2 507 aa8.84□□□□□ -0.99
SP140-209ENST00000476126 DNAAF4Q8WXU2 420 aa8.84□□□□□ -0.99
SP140-209ENST00000476126 EYA3Q99504 573 aa8.84□□□□□ -0.99
SP140-209ENST00000476126 VPS33BQ9H267 617 aa8.84□□□□□ -0.99
SP140-209ENST00000476126 SPINK5Q9NQ38 1064 aaPredicted RBP8.84□□□□□ -0.99
SP140-209ENST00000476126 RIMBP2O15034 1052 aa8.83□□□□□ -1
SP140-209ENST00000476126 IGKV5-2P06315 115 aa8.83□□□□□ -1
SP140-209ENST00000476126 CTSWP56202 376 aa8.83□□□□□ -1
SP140-209ENST00000476126 RPS8P62241 208 aaKnown RBP8.83□□□□□ -1
SP140-209ENST00000476126 KIAA2012Q0VF49 1180 aa8.83□□□□□ -1
SP140-209ENST00000476126 WASHC4Q2M389 1173 aa8.83□□□□□ -1
SP140-209ENST00000476126 PNMA8AQ86V59 439 aaPredicted RBP8.83□□□□□ -1
SP140-209ENST00000476126 ANKRD18AQ8IVF6 992 aa8.83□□□□□ -1
SP140-209ENST00000476126 CDC5LQ99459 802 aaKnown RBP8.83□□□□□ -1
SP140-209ENST00000476126 BCL2L13Q9BXK5 485 aa8.83□□□□□ -1
SP140-209ENST00000476126 RTFDC1Q9BY42 306 aaPredicted RBP8.83□□□□□ -1
SP140-209ENST00000476126 SEC31BQ9NQW1 1179 aa8.83□□□□□ -1
SP140-209ENST00000476126 ANKIB1Q9P2G1 1089 aa8.83□□□□□ -1
SP140-209ENST00000476126 ZNRF3Q9ULT6 936 aa8.83□□□□□ -1
SP140-209ENST00000476126 RAD17O75943 681 aa8.82□□□□□ -1
SP140-209ENST00000476126 UFL1O94874 794 aa8.82□□□□□ -1
SP140-209ENST00000476126 GPSM2P81274 684 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms