RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 BRD1O95696 1058 aa8.38□□□□□ -1.07
UBR4-212ENST00000475973 MPRIPQ6WCQ1 1025 aa8.38□□□□□ -1.07
UBR4-212ENST00000475973 AEBP1Q8IUX7 1158 aa8.38□□□□□ -1.07
UBR4-212ENST00000475973 EYA1Q99502 592 aa8.38□□□□□ -1.07
UBR4-212ENST00000475973 MEIS3Q99687 375 aa8.38□□□□□ -1.07
UBR4-212ENST00000475973 TMOD3Q9NYL9 352 aa8.38□□□□□ -1.07
UBR4-212ENST00000475973 ERC2O15083 957 aa8.37□□□□□ -1.07
UBR4-212ENST00000475973 OFD1O75665 1012 aa8.37□□□□□ -1.07
UBR4-212ENST00000475973 REC8O95072 547 aa8.37□□□□□ -1.07
UBR4-212ENST00000475973 MCM5P33992 734 aa8.37□□□□□ -1.07
UBR4-212ENST00000475973 ATP8B2P98198 1209 aa8.37□□□□□ -1.07
UBR4-212ENST00000475973 DCTN1Q14203 1278 aa8.37□□□□□ -1.07
UBR4-212ENST00000475973 SULT6B1Q6IMI4 303 aa8.37□□□□□ -1.07
UBR4-212ENST00000475973 TMEM92Q6UXU6 159 aa8.37□□□□□ -1.07
UBR4-212ENST00000475973 IFNL2Q8IZJ0 200 aa8.37□□□□□ -1.07
UBR4-212ENST00000475973 FLAD1Q8NFF5 587 aa8.37□□□□□ -1.07
UBR4-212ENST00000475973 SYT17Q9BSW7 474 aa8.37□□□□□ -1.07
UBR4-212ENST00000475973 GZF1Q9H116 711 aaPredicted RBP8.37□□□□□ -1.07
UBR4-212ENST00000475973 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.37□□□□□ -1.07
UBR4-212ENST00000475973 CACNA1FO60840 1977 aa8.37□□□□□ -1.07
UBR4-212ENST00000475973 USP42Q9H9J4 1324 aaKnown RBP8.36□□□□□ -1.07
UBR4-212ENST00000475973 GOLGA6L22H0YM25 854 aa8.36□□□□□ -1.07
UBR4-212ENST00000475973 RRP9O43818 475 aaKnown RBP8.36□□□□□ -1.07
UBR4-212ENST00000475973 KCNQ4P56696 695 aa8.36□□□□□ -1.07
UBR4-212ENST00000475973 KRT24Q2M2I5 525 aa8.36□□□□□ -1.07
UBR4-212ENST00000475973 ZSCAN30Q86W11 494 aa8.36□□□□□ -1.07
UBR4-212ENST00000475973 TMEM87AQ8NBN3 555 aa8.36□□□□□ -1.07
UBR4-212ENST00000475973 GPT2Q8TD30 523 aa8.36□□□□□ -1.07
UBR4-212ENST00000475973 OXER1Q8TDS5 423 aa8.36□□□□□ -1.07
UBR4-212ENST00000475973 NOL7Q9UMY1 257 aaKnown RBP8.36□□□□□ -1.07
UBR4-212ENST00000475973 COLQQ9Y215 455 aaPredicted RBP8.36□□□□□ -1.07
UBR4-212ENST00000475973 SHANK3Q9BYB0 1731 aa8.35□□□□□ -1.07
UBR4-212ENST00000475973 ELL2O00472 640 aaPredicted RBP8.35□□□□□ -1.07
UBR4-212ENST00000475973 GPR37O15354 613 aa8.35□□□□□ -1.07
UBR4-212ENST00000475973 HMMRO75330 724 aa8.35□□□□□ -1.07
UBR4-212ENST00000475973 TPM2P07951 284 aa8.35□□□□□ -1.07
UBR4-212ENST00000475973 PHKG2P15735 406 aa8.35□□□□□ -1.07
UBR4-212ENST00000475973 MTHFSDQ2M296 383 aaKnown RBP8.35□□□□□ -1.07
UBR4-212ENST00000475973 ZSCAN23Q3MJ62 389 aa8.35□□□□□ -1.07
UBR4-212ENST00000475973 AMOTQ4VCS5 1084 aa8.35□□□□□ -1.07
UBR4-212ENST00000475973 PLEKHO1Q53GL0 409 aaPredicted RBP8.35□□□□□ -1.07
UBR4-212ENST00000475973 SSH3Q8TE77 659 aa8.35□□□□□ -1.07
UBR4-212ENST00000475973 KCNB2Q92953 911 aa8.35□□□□□ -1.07
UBR4-212ENST00000475973 ESYT1Q9BSJ8 1104 aa8.35□□□□□ -1.07
UBR4-212ENST00000475973 SRCIN1Q9C0H9 1055 aa8.35□□□□□ -1.07
UBR4-212ENST00000475973 CEMIPQ8WUJ3 1361 aa8.35□□□□□ -1.07
UBR4-212ENST00000475973 PKD1L3Q7Z443 1732 aa8.34□□□□□ -1.07
UBR4-212ENST00000475973 LOC102724428A0A0B4J2F2 783 aa8.34□□□□□ -1.07
UBR4-212ENST00000475973 GRXCR2A6NFK2 248 aa8.34□□□□□ -1.07
UBR4-212ENST00000475973 ST18O60284 1047 aa8.34□□□□□ -1.07
UBR4-212ENST00000475973 CHMLP26374 656 aa8.34□□□□□ -1.07
UBR4-212ENST00000475973 NASPP49321 788 aaPredicted RBP8.34□□□□□ -1.07
UBR4-212ENST00000475973 SIK1P57059 783 aa8.34□□□□□ -1.07
UBR4-212ENST00000475973 PKP1Q13835 747 aa8.34□□□□□ -1.07
UBR4-212ENST00000475973 C1orf141Q5JVX7 400 aa8.34□□□□□ -1.07
UBR4-212ENST00000475973 LRSAM1Q6UWE0 723 aa8.34□□□□□ -1.07
UBR4-212ENST00000475973 G2E3Q7L622 706 aa8.34□□□□□ -1.07
UBR4-212ENST00000475973 DCBLD2Q96PD2 775 aa8.34□□□□□ -1.07
UBR4-212ENST00000475973 RBSNQ9H1K0 784 aa8.34□□□□□ -1.07
UBR4-212ENST00000475973 DDX49Q9Y6V7 483 aaKnown RBP8.34□□□□□ -1.07
UBR4-212ENST00000475973 TRIM66O15016 1216 aa8.33□□□□□ -1.08
UBR4-212ENST00000475973 MBD3O95983 291 aa8.33□□□□□ -1.08
UBR4-212ENST00000475973 GNAI2P04899 355 aa8.33□□□□□ -1.08
UBR4-212ENST00000475973 GNAI3P08754 354 aa8.33□□□□□ -1.08
UBR4-212ENST00000475973 HOXB7P09629 217 aa8.33□□□□□ -1.08
UBR4-212ENST00000475973 OSBPP22059 807 aa8.33□□□□□ -1.08
UBR4-212ENST00000475973 GPR162Q16538 588 aa8.33□□□□□ -1.08
UBR4-212ENST00000475973 ZNF530Q6P9A1 599 aaPredicted RBP8.33□□□□□ -1.08
UBR4-212ENST00000475973 MCM10Q7L590 875 aa8.33□□□□□ -1.08
UBR4-212ENST00000475973 COL23A1Q86Y22 540 aaPredicted RBP8.33□□□□□ -1.08
UBR4-212ENST00000475973 ZGPATQ8N5A5 531 aaKnown RBP8.33□□□□□ -1.08
UBR4-212ENST00000475973 SLC39A7Q92504 469 aa8.33□□□□□ -1.08
UBR4-212ENST00000475973 PIGBQ92521 554 aa8.33□□□□□ -1.08
UBR4-212ENST00000475973 TMX3Q96JJ7 454 aa8.33□□□□□ -1.08
UBR4-212ENST00000475973 DCAF5Q96JK2 942 aa8.33□□□□□ -1.08
UBR4-212ENST00000475973 SNRKQ9NRH2 765 aa8.33□□□□□ -1.08
UBR4-212ENST00000475973 TMEM63CQ9P1W3 806 aa8.33□□□□□ -1.08
UBR4-212ENST00000475973 LY75O60449 1722 aa8.32□□□□□ -1.08
UBR4-212ENST00000475973 ERVV-2B6SEH9 535 aa8.32□□□□□ -1.08
UBR4-212ENST00000475973 SMARCA5O60264 1052 aaPredicted RBP8.32□□□□□ -1.08
UBR4-212ENST00000475973 PHF14O94880 888 aa8.32□□□□□ -1.08
UBR4-212ENST00000475973 HSPA4P34932 840 aa8.32□□□□□ -1.08
UBR4-212ENST00000475973 MTX1Q13505 466 aa8.32□□□□□ -1.08
UBR4-212ENST00000475973 MSL1Q68DK7 614 aa8.32□□□□□ -1.08
UBR4-212ENST00000475973 CASC1Q6TDU7 716 aa8.32□□□□□ -1.08
UBR4-212ENST00000475973 TTC14Q96N46 770 aa8.32□□□□□ -1.08
UBR4-212ENST00000475973 RPAP1Q9BWH6 1393 aaPredicted RBP8.32□□□□□ -1.08
UBR4-212ENST00000475973 HEG1Q9ULI3 1381 aa8.32□□□□□ -1.08
UBR4-212ENST00000475973 RGPD2P0DJD1 1756 aa8.31□□□□□ -1.08
UBR4-212ENST00000475973 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.31□□□□□ -1.08
UBR4-212ENST00000475973 POTEFA5A3E0 1075 aa8.31□□□□□ -1.08
UBR4-212ENST00000475973 GNPATO15228 680 aa8.31□□□□□ -1.08
UBR4-212ENST00000475973 TBC1D12O60347 775 aa8.31□□□□□ -1.08
UBR4-212ENST00000475973 RAB11FIP3O75154 756 aa8.31□□□□□ -1.08
UBR4-212ENST00000475973 C7P10643 843 aa8.31□□□□□ -1.08
UBR4-212ENST00000475973 ATP6V1AP38606 617 aa8.31□□□□□ -1.08
UBR4-212ENST00000475973 CABP4P57796 275 aa8.31□□□□□ -1.08
UBR4-212ENST00000475973 MCTP1Q6DN14 999 aa8.31□□□□□ -1.08
UBR4-212ENST00000475973 PI4K2BQ8TCG2 481 aa8.31□□□□□ -1.08
UBR4-212ENST00000475973 USP44Q9H0E7 712 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms