RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 POTECB2RU33 542 aa8.85□□□□□ -0.99
SHQ1-207ENST00000475558 PDE6BP35913 854 aa8.85□□□□□ -0.99
SHQ1-207ENST00000475558 CCT4P50991 539 aaKnown RBP8.85□□□□□ -0.99
SHQ1-207ENST00000475558 NPM2Q86SE8 214 aaKnown RBP8.85□□□□□ -0.99
SHQ1-207ENST00000475558 ZNF622Q969S3 477 aaKnown RBP eCLIP8.85□□□□□ -0.998e-7■■■□□ 14.9
SHQ1-207ENST00000475558 CCDC136Q96JN2 1154 aa8.85□□□□□ -0.99
SHQ1-207ENST00000475558 BCL2L12Q9HB09 334 aa8.85□□□□□ -0.99
SHQ1-207ENST00000475558 DDX21Q9NR30 783 aaKnown RBP eCLIP8.85□□□□□ -0.99
SHQ1-207ENST00000475558 ZBTB1Q9Y2K1 713 aa8.85□□□□□ -0.99
SHQ1-207ENST00000475558 DLEC1Q9Y238 1755 aa8.85□□□□□ -0.99
SHQ1-207ENST00000475558 PLIN1O60240 522 aa8.84□□□□□ -0.99
SHQ1-207ENST00000475558 TRIM27P14373 513 aa8.84□□□□□ -0.99
SHQ1-207ENST00000475558 EIF2S2P20042 333 aaKnown RBP8.84□□□□□ -0.99
SHQ1-207ENST00000475558 VASPP50552 380 aaPredicted RBP8.84□□□□□ -0.99
SHQ1-207ENST00000475558 SLC39A6Q13433 755 aa8.84□□□□□ -0.99
SHQ1-207ENST00000475558 MVPQ14764 893 aaKnown RBP8.84□□□□□ -0.99
SHQ1-207ENST00000475558 ERFEQ4G0M1 354 aa8.84□□□□□ -0.99
SHQ1-207ENST00000475558 INTS3Q68E01 1043 aaKnown RBP8.84□□□□□ -0.99
SHQ1-207ENST00000475558 L3MBTL3Q96JM7 780 aaPredicted RBP8.84□□□□□ -0.99
SHQ1-207ENST00000475558 BRIP1Q9BX63 1249 aa8.84□□□□□ -0.99
SHQ1-207ENST00000475558 LTBP3Q9NS15 1303 aa8.83□□□□□ -1
SHQ1-207ENST00000475558 TIAM2Q8IVF5 1701 aa8.83□□□□□ -1
SHQ1-207ENST00000475558 C21orf2O43822 256 aa8.83□□□□□ -1
SHQ1-207ENST00000475558 EIF5P55010 431 aaKnown RBP8.83□□□□□ -1
SHQ1-207ENST00000475558 BICDL1Q6ZP65 573 aa8.83□□□□□ -1
SHQ1-207ENST00000475558 ZNF496Q96IT1 587 aaPredicted RBP8.83□□□□□ -1
SHQ1-207ENST00000475558 RWDD1Q9H446 243 aaPredicted RBP8.83□□□□□ -1
SHQ1-207ENST00000475558 MKRN1Q9UHC7 482 aaKnown RBP8.83□□□□□ -1
SHQ1-207ENST00000475558 DICER1Q9UPY3 1922 aaKnown RBP8.83□□□□□ -1
SHQ1-207ENST00000475558 FLIIQ13045 1269 aa8.82□□□□□ -1
SHQ1-207ENST00000475558 SOGA3Q5TF21 947 aa8.82□□□□□ -1
SHQ1-207ENST00000475558 PDCD7Q8N8D1 485 aaKnown RBP8.82□□□□□ -1
SHQ1-207ENST00000475558 CNKSR1Q969H4 720 aa8.82□□□□□ -1
SHQ1-207ENST00000475558 CRBNQ96SW2 442 aa8.82□□□□□ -1
SHQ1-207ENST00000475558 TAOK3Q9H2K8 898 aa8.82□□□□□ -1
SHQ1-207ENST00000475558 PRDM10Q9NQV6 1147 aa8.82□□□□□ -1
SHQ1-207ENST00000475558 CARMIL3Q8ND23 1372 aa8.82□□□□□ -1
SHQ1-207ENST00000475558 MRC1P22897 1456 aa8.82□□□□□ -1
SHQ1-207ENST00000475558 FER1L6Q2WGJ9 1857 aa8.81□□□□□ -1
SHQ1-207ENST00000475558 IQCA1LA6NCM1 817 aa8.81□□□□□ -1
SHQ1-207ENST00000475558 ZBTB7BO15156 539 aaPredicted RBP8.81□□□□□ -1
SHQ1-207ENST00000475558 KCNQ3O43525 872 aa8.81□□□□□ -1
SHQ1-207ENST00000475558 ALDH1L1O75891 902 aa8.81□□□□□ -1
SHQ1-207ENST00000475558 DDNO94850 711 aaPredicted RBP8.81□□□□□ -1
SHQ1-207ENST00000475558 GNAI3P08754 354 aa8.81□□□□□ -1
SHQ1-207ENST00000475558 NEXNQ0ZGT2 675 aa8.81□□□□□ -1
SHQ1-207ENST00000475558 FKBP5Q13451 457 aaPredicted RBP8.81□□□□□ -1
SHQ1-207ENST00000475558 TBC1D9BQ66K14 1250 aa8.81□□□□□ -1
SHQ1-207ENST00000475558 STYK1Q6J9G0 422 aa8.81□□□□□ -1
SHQ1-207ENST00000475558 PRR5LQ6MZQ0 368 aa8.81□□□□□ -1
SHQ1-207ENST00000475558 KSR2Q6VAB6 950 aa8.81□□□□□ -1
SHQ1-207ENST00000475558 RPAP2Q8IXW5 612 aaPredicted RBP8.81□□□□□ -1
SHQ1-207ENST00000475558 EXOC6Q8TAG9 804 aa8.81□□□□□ -1
SHQ1-207ENST00000475558 CLUAP1Q96AJ1 413 aa8.81□□□□□ -1
SHQ1-207ENST00000475558 BCL2L13Q9BXK5 485 aa8.81□□□□□ -1
SHQ1-207ENST00000475558 IBTKQ9P2D0 1353 aaPredicted RBP8.81□□□□□ -1
SHQ1-207ENST00000475558 RGL2O15211 777 aa8.8□□□□□ -1
SHQ1-207ENST00000475558 NPHP1O15259 732 aa8.8□□□□□ -1
SHQ1-207ENST00000475558 FOXN1O15353 648 aa8.8□□□□□ -1
SHQ1-207ENST00000475558 IL6STP40189 918 aaPredicted RBP8.8□□□□□ -1
SHQ1-207ENST00000475558 CTCFP49711 727 aaPredicted RBP8.8□□□□□ -1
SHQ1-207ENST00000475558 PSEN1P49768 467 aa8.8□□□□□ -1
SHQ1-207ENST00000475558 MMRN1Q13201 1228 aa8.8□□□□□ -1
SHQ1-207ENST00000475558 ANKRD13DQ6ZTN6 518 aa8.8□□□□□ -1
SHQ1-207ENST00000475558 LDHDQ86WU2 507 aa8.8□□□□□ -1
SHQ1-207ENST00000475558 SPNS2Q8IVW8 549 aa8.8□□□□□ -1
SHQ1-207ENST00000475558 ITPRIPQ8IWB1 547 aa8.8□□□□□ -1
SHQ1-207ENST00000475558 PANK1Q8TE04 598 aa8.8□□□□□ -1
SHQ1-207ENST00000475558 AIDAQ96BJ3 306 aa8.8□□□□□ -1
SHQ1-207ENST00000475558 SETDB2Q96T68 719 aa8.8□□□□□ -1
SHQ1-207ENST00000475558 COG6Q9Y2V7 657 aa8.8□□□□□ -1
SHQ1-207ENST00000475558 CNTNAP1P78357 1384 aa8.8□□□□□ -1
SHQ1-207ENST00000475558 VIRMAQ69YN4 1812 aaKnown RBP8.8□□□□□ -1
SHQ1-207ENST00000475558 ABCC4O15439 1325 aa8.8□□□□□ -1
SHQ1-207ENST00000475558 ANKRD31Q8N7Z5 1873 aa8.79□□□□□ -1
SHQ1-207ENST00000475558 TMEM88BA6NKF7 163 aa8.79□□□□□ -1
SHQ1-207ENST00000475558 SRGNP10124 158 aa8.79□□□□□ -1
SHQ1-207ENST00000475558 EMP3P54852 163 aa8.79□□□□□ -1
SHQ1-207ENST00000475558 IRX6P78412 446 aaPredicted RBP8.79□□□□□ -1
SHQ1-207ENST00000475558 ST5P78524 1137 aa8.79□□□□□ -1
SHQ1-207ENST00000475558 KRT24Q2M2I5 525 aa8.79□□□□□ -1
SHQ1-207ENST00000475558 HSP90AB3PQ58FF7 597 aa8.79□□□□□ -1
SHQ1-207ENST00000475558 C20orf194Q5TEA3 1177 aa8.79□□□□□ -1
SHQ1-207ENST00000475558 CENPQQ7L2Z9 268 aaPredicted RBP8.79□□□□□ -1
SHQ1-207ENST00000475558 TMEM57Q8N5G2 664 aa8.79□□□□□ -1
SHQ1-207ENST00000475558 CNBD1Q8NA66 436 aa8.79□□□□□ -1
SHQ1-207ENST00000475558 DNAAF4Q8WXU2 420 aa8.79□□□□□ -1
SHQ1-207ENST00000475558 MASTLQ96GX5 879 aa8.79□□□□□ -1
SHQ1-207ENST00000475558 SRCIN1Q9C0H9 1055 aa8.79□□□□□ -1
SHQ1-207ENST00000475558 ZBTB40Q9NUA8 1239 aa8.79□□□□□ -1
SHQ1-207ENST00000475558 TBC1D2BQ9UPU7 963 aa8.79□□□□□ -1
SHQ1-207ENST00000475558 USP16Q9Y5T5 823 aa8.79□□□□□ -1
SHQ1-207ENST00000475558 PASKQ96RG2 1323 aa8.79□□□□□ -1
SHQ1-207ENST00000475558 HMMRO75330 724 aa8.78□□□□□ -1
SHQ1-207ENST00000475558 CHRM1P11229 460 aaPredicted RBP8.78□□□□□ -1
SHQ1-207ENST00000475558 HSP90B1P14625 803 aaKnown RBP8.78□□□□□ -1
SHQ1-207ENST00000475558 PRPF40BQ6NWY9 871 aaKnown RBP8.78□□□□□ -1
SHQ1-207ENST00000475558 RIC3Q7Z5B4 369 aa8.78□□□□□ -1
SHQ1-207ENST00000475558 CCDC24Q8N4L8 307 aa8.78□□□□□ -1
SHQ1-207ENST00000475558 PLBD2Q8NHP8 589 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms