RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 MAP3K6O95382 1288 aa12.07□□□□□ -0.48
SMC5-203ENST00000475540 PCSK2P16519 638 aa12.07□□□□□ -0.48
SMC5-203ENST00000475540 CHSY3Q70JA7 882 aa12.07□□□□□ -0.48
SMC5-203ENST00000475540 TXNDC2Q86VQ3 553 aa12.07□□□□□ -0.48
SMC5-203ENST00000475540 RPLP1P05386 114 aaKnown RBP12.06□□□□□ -0.48
SMC5-203ENST00000475540 ADH7P40394 386 aa12.06□□□□□ -0.48
SMC5-203ENST00000475540 SERPINB4P48594 390 aa12.06□□□□□ -0.48
SMC5-203ENST00000475540 PODNQ7Z5L7 613 aa12.06□□□□□ -0.48
SMC5-203ENST00000475540 BEND7Q8N7W2 519 aaPredicted RBP12.06□□□□□ -0.48
SMC5-203ENST00000475540 TTC16Q8NEE8 873 aa12.06□□□□□ -0.48
SMC5-203ENST00000475540 ZFATQ9P243 1243 aa12.06□□□□□ -0.48
SMC5-203ENST00000475540 ICMTO60725 284 aa12.05□□□□□ -0.48
SMC5-203ENST00000475540 DNM1Q05193 864 aaKnown RBP12.05□□□□□ -0.48
SMC5-203ENST00000475540 PCSK7Q16549 785 aa12.05□□□□□ -0.48
SMC5-203ENST00000475540 NUDT16Q96DE0 195 aaKnown RBP12.05□□□□□ -0.48
SMC5-203ENST00000475540 MDFIQ99750 246 aa12.05□□□□□ -0.48
SMC5-203ENST00000475540 TRIP4Q15650 581 aaPredicted RBP12.04□□□□□ -0.48
SMC5-203ENST00000475540 NLRP13Q86W25 1043 aa12.04□□□□□ -0.48
SMC5-203ENST00000475540 EDEM1Q92611 657 aa12.04□□□□□ -0.48
SMC5-203ENST00000475540 DNAJB12Q9NXW2 375 aaKnown RBP12.04□□□□□ -0.48
SMC5-203ENST00000475540 MZF1P28698 734 aaPredicted RBP12.03□□□□□ -0.48
SMC5-203ENST00000475540 DHX32Q7L7V1 743 aaKnown RBP12.03□□□□□ -0.48
SMC5-203ENST00000475540 GLYCTKQ8IVS8 523 aa12.03□□□□□ -0.48
SMC5-203ENST00000475540 TRAIPQ9BWF2 469 aa12.03□□□□□ -0.48
SMC5-203ENST00000475540 RNF225M0QZC1 329 aaPredicted RBP12.02□□□□□ -0.49
SMC5-203ENST00000475540 TLR7Q9NYK1 1049 aaKnown RBP12.02□□□□□ -0.49
SMC5-203ENST00000475540 MKL2Q9ULH7 1088 aa12.02□□□□□ -0.49
SMC5-203ENST00000475540 CNTNAP5Q8WYK1 1306 aa12.02□□□□□ -0.49
SMC5-203ENST00000475540 PHF20L1A8MW92 1017 aa12.01□□□□□ -0.49
SMC5-203ENST00000475540 H3BRB1 525 aa12.01□□□□□ -0.49
SMC5-203ENST00000475540 PSAPP07602 524 aa12.01□□□□□ -0.49
SMC5-203ENST00000475540 SNRPNP63162 240 aaKnown RBP12.01□□□□□ -0.49
SMC5-203ENST00000475540 KANK3Q6NY19 840 aa12.01□□□□□ -0.49
SMC5-203ENST00000475540 TUT1Q9H6E5 874 aaKnown RBP12.01□□□□□ -0.49
SMC5-203ENST00000475540 SLC6A14Q9UN76 642 aa12.01□□□□□ -0.49
SMC5-203ENST00000475540 PIK3R2O00459 728 aa12□□□□□ -0.49
SMC5-203ENST00000475540 PDGFAP04085 211 aa12□□□□□ -0.49
SMC5-203ENST00000475540 C8orf34Q49A92 452 aa12□□□□□ -0.49
SMC5-203ENST00000475540 MMP20O60882 483 aa11.99□□□□□ -0.49
SMC5-203ENST00000475540 TTC39BQ5VTQ0 682 aaPredicted RBP11.99□□□□□ -0.49
SMC5-203ENST00000475540 TRPM4Q8TD43 1214 aa11.99□□□□□ -0.49
SMC5-203ENST00000475540 POLIQ9UNA4 740 aa11.99□□□□□ -0.49
SMC5-203ENST00000475540 GNEQ9Y223 722 aaKnown RBP11.99□□□□□ -0.49
SMC5-203ENST00000475540 PDIA4P13667 645 aaKnown RBP11.98□□□□□ -0.49
SMC5-203ENST00000475540 USP5P45974 858 aa11.98□□□□□ -0.49
SMC5-203ENST00000475540 PLAURQ03405 335 aa11.98□□□□□ -0.49
SMC5-203ENST00000475540 PDE12Q6L8Q7 609 aaKnown RBP11.98□□□□□ -0.49
SMC5-203ENST00000475540 ZBTB42B2RXF5 422 aa11.97□□□□□ -0.49
SMC5-203ENST00000475540 HOXB4P17483 251 aaPredicted RBP11.97□□□□□ -0.49
SMC5-203ENST00000475540 DGKGP49619 791 aa11.97□□□□□ -0.49
SMC5-203ENST00000475540 NRLP54845 237 aa11.97□□□□□ -0.49
SMC5-203ENST00000475540 ZNF438Q7Z4V0 828 aa11.97□□□□□ -0.49
SMC5-203ENST00000475540 FAM35AQ86V20 835 aa11.97□□□□□ -0.49
SMC5-203ENST00000475540 GGNBP2Q9H3C7 697 aa11.97□□□□□ -0.49
SMC5-203ENST00000475540 STARD13Q9Y3M8 1113 aa11.97□□□□□ -0.49
SMC5-203ENST00000475540 M0R082 166 aa11.96□□□□□ -0.49
SMC5-203ENST00000475540 FZD6O60353 706 aa11.96□□□□□ -0.49
SMC5-203ENST00000475540 GPLD1P80108 840 aa11.96□□□□□ -0.49
SMC5-203ENST00000475540 KCNA1Q09470 495 aa11.96□□□□□ -0.49
SMC5-203ENST00000475540 XKR5Q6UX68 686 aa11.96□□□□□ -0.49
SMC5-203ENST00000475540 LINC00114Q6XXX2 140 aa11.96□□□□□ -0.49
SMC5-203ENST00000475540 MICALL1Q8N3F8 863 aa11.96□□□□□ -0.49
SMC5-203ENST00000475540 ZNF417Q8TAU3 575 aa11.96□□□□□ -0.49
SMC5-203ENST00000475540 ZNF587Q96SQ5 575 aaPredicted RBP11.96□□□□□ -0.49
SMC5-203ENST00000475540 ELP3Q9H9T3 547 aa11.96□□□□□ -0.49
SMC5-203ENST00000475540 ABI2Q9NYB9 513 aaPredicted RBP11.96□□□□□ -0.49
SMC5-203ENST00000475540 CPB1P15086 417 aa11.95□□□□□ -0.5
SMC5-203ENST00000475540 IRS1P35568 1242 aa11.95□□□□□ -0.5
SMC5-203ENST00000475540 SOX18P35713 384 aa11.95□□□□□ -0.5
SMC5-203ENST00000475540 MLLT1Q03111 559 aaPredicted RBP11.95□□□□□ -0.5
SMC5-203ENST00000475540 KCNMA1Q12791 1236 aa11.95□□□□□ -0.5
SMC5-203ENST00000475540 CCDC87Q9NVE4 849 aa11.95□□□□□ -0.5
SMC5-203ENST00000475540 GNB5O14775 395 aa11.94□□□□□ -0.5
SMC5-203ENST00000475540 ALBP02768 609 aa11.94□□□□□ -0.5
SMC5-203ENST00000475540 EHHADHQ08426 723 aa11.94□□□□□ -0.5
SMC5-203ENST00000475540 ECM1Q16610 540 aa11.94□□□□□ -0.5
SMC5-203ENST00000475540 PSAPL1Q6NUJ1 521 aa11.94□□□□□ -0.5
SMC5-203ENST00000475540 BRPF3Q9ULD4 1205 aa11.94□□□□□ -0.5
SMC5-203ENST00000475540 LOC102724428A0A0B4J2F2 783 aa11.93□□□□□ -0.5
SMC5-203ENST00000475540 PATL2C9JE40 543 aaKnown RBP11.93□□□□□ -0.5
SMC5-203ENST00000475540 RGS9O75916 674 aaPredicted RBP11.93□□□□□ -0.5
SMC5-203ENST00000475540 SIK1P57059 783 aa11.93□□□□□ -0.5
SMC5-203ENST00000475540 C20orf204Q6ZNR8 217 aa11.93□□□□□ -0.5
SMC5-203ENST00000475540 HFE2Q6ZVN8 426 aa11.93□□□□□ -0.5
SMC5-203ENST00000475540 OR13H1Q8NG92 308 aa11.93□□□□□ -0.5
SMC5-203ENST00000475540 NUDT8Q8WV74 236 aa11.93□□□□□ -0.5
SMC5-203ENST00000475540 SOWAHDA6NJG2 315 aa11.92□□□□□ -0.5
SMC5-203ENST00000475540 LILRB5O75023 590 aa11.92□□□□□ -0.5
SMC5-203ENST00000475540 ARHGAP4P98171 946 aa11.92□□□□□ -0.5
SMC5-203ENST00000475540 ELMSAN1Q6PJG2 1045 aa11.92□□□□□ -0.5
SMC5-203ENST00000475540 RBSNQ9H1K0 784 aa11.92□□□□□ -0.5
SMC5-203ENST00000475540 JPH1Q9HDC5 661 aaPredicted RBP11.92□□□□□ -0.5
SMC5-203ENST00000475540 PRDM6Q9NQX0 595 aa11.92□□□□□ -0.5
SMC5-203ENST00000475540 TMEM63CQ9P1W3 806 aa11.92□□□□□ -0.5
SMC5-203ENST00000475540 A6NHS1 94 aa11.91□□□□□ -0.5
SMC5-203ENST00000475540 GHRHP01286 108 aa11.91□□□□□ -0.5
SMC5-203ENST00000475540 C8orf86Q6ZUL3 223 aa11.91□□□□□ -0.5
SMC5-203ENST00000475540 NSUN5Q96P11 429 aaKnown RBP11.91□□□□□ -0.5
SMC5-203ENST00000475540 NAGPAQ9UK23 515 aa11.91□□□□□ -0.5
SMC5-203ENST00000475540 J3QW42 95 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms