RNA–Protein interactions for RNA: ENST00000475488.3

SSPO-205, Transcript of SCO-spondin, humanhuman

TSL 1 (best)

Gene SSPO, Length 7,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPO-205ENST00000475488 TMC6Q7Z403 805 aa16.26■□□□□ 0.19
SSPO-205ENST00000475488 CCT6BQ92526 530 aa16.26■□□□□ 0.19
SSPO-205ENST00000475488 AQRO60306 1485 aaKnown RBP eCLIP16.25■□□□□ 0.19
SSPO-205ENST00000475488 BIN1O00499 593 aa16.25■□□□□ 0.19
SSPO-205ENST00000475488 ERICH3Q5RHP9 1530 aa16.25■□□□□ 0.19
SSPO-205ENST00000475488 MSANTD4Q8NCY6 345 aa16.25■□□□□ 0.19
SSPO-205ENST00000475488 GMNNO75496 209 aa16.25■□□□□ 0.19
SSPO-205ENST00000475488 NAP1L3Q99457 506 aaPredicted RBP16.25■□□□□ 0.19
SSPO-205ENST00000475488 FAM107BQ9H098 131 aa16.25■□□□□ 0.19
SSPO-205ENST00000475488 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.25■□□□□ 0.19
SSPO-205ENST00000475488 NOD1Q9Y239 953 aa16.25■□□□□ 0.19
SSPO-205ENST00000475488 ZBTB16Q05516 673 aa16.24■□□□□ 0.19
SSPO-205ENST00000475488 PANK2Q9BZ23 570 aa16.24■□□□□ 0.19
SSPO-205ENST00000475488 C6orf50Q9HD87 102 aa16.24■□□□□ 0.19
SSPO-205ENST00000475488 AKNAD1Q5T1N1 836 aa16.24■□□□□ 0.19
SSPO-205ENST00000475488 ZBTB21Q9ULJ3 1066 aa16.24■□□□□ 0.19
SSPO-205ENST00000475488 USP16Q9Y5T5 823 aa16.24■□□□□ 0.19
SSPO-205ENST00000475488 TMPOP42166 694 aaKnown RBP16.24■□□□□ 0.19
SSPO-205ENST00000475488 HAND2P61296 217 aa16.24■□□□□ 0.19
SSPO-205ENST00000475488 CCDC6Q16204 474 aa16.24■□□□□ 0.19
SSPO-205ENST00000475488 STX1AQ16623 288 aa16.24■□□□□ 0.19
SSPO-205ENST00000475488 ACSBG1Q96GR2 724 aa16.24■□□□□ 0.19
SSPO-205ENST00000475488 ZNF804AQ7Z570 1209 aa16.24■□□□□ 0.19
SSPO-205ENST00000475488 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.24■□□□□ 0.19
SSPO-205ENST00000475488 SMARCC1Q92922 1105 aaPredicted RBP16.24■□□□□ 0.19
SSPO-205ENST00000475488 NCOA2Q15596 1464 aa16.24■□□□□ 0.19
SSPO-205ENST00000475488 SPDYE3A6NKU9 549 aa16.24■□□□□ 0.19
SSPO-205ENST00000475488 PARP3Q9Y6F1 533 aa16.24■□□□□ 0.19
SSPO-205ENST00000475488 ATP6V1AP38606 617 aa16.23■□□□□ 0.19
SSPO-205ENST00000475488 EVI5LQ96CN4 794 aa16.23■□□□□ 0.19
SSPO-205ENST00000475488 SATB1Q01826 763 aa16.23■□□□□ 0.19
SSPO-205ENST00000475488 NCOA7Q8NI08 942 aa16.23■□□□□ 0.19
SSPO-205ENST00000475488 FAM135AQ9P2D6 1515 aa16.23■□□□□ 0.19
SSPO-205ENST00000475488 PRPHP41219 470 aa16.23■□□□□ 0.19
SSPO-205ENST00000475488 NSRP1Q9H0G5 558 aaKnown RBP16.23■□□□□ 0.19
SSPO-205ENST00000475488 CCDC61Q9Y6R9 512 aa16.23■□□□□ 0.19
SSPO-205ENST00000475488 FAM169AQ9Y6X4 670 aa16.23■□□□□ 0.19
SSPO-205ENST00000475488 WTAPQ15007 396 aa16.23■□□□□ 0.19
SSPO-205ENST00000475488 NBPF8Q3BBV2 869 aa16.23■□□□□ 0.19
SSPO-205ENST00000475488 NBPF14Q5TI25 921 aa16.23■□□□□ 0.19
SSPO-205ENST00000475488 KIAA1524Q8TCG1 905 aa16.23■□□□□ 0.19
SSPO-205ENST00000475488 PFDN4Q9NQP4 134 aa16.23■□□□□ 0.19
SSPO-205ENST00000475488 RAPGEF3O95398 923 aa16.23■□□□□ 0.19
SSPO-205ENST00000475488 MAPK8IP2Q13387 824 aaPredicted RBP16.23■□□□□ 0.19
SSPO-205ENST00000475488 JDP2Q8WYK2 163 aa16.23■□□□□ 0.19
SSPO-205ENST00000475488 ATAD2BQ9ULI0 1458 aa16.23■□□□□ 0.19
SSPO-205ENST00000475488 LPXNO60711 386 aa16.22■□□□□ 0.19
SSPO-205ENST00000475488 NBPF7P0C2Y1 421 aaPredicted RBP16.22■□□□□ 0.19
SSPO-205ENST00000475488 MKRN1Q9UHC7 482 aaKnown RBP16.22■□□□□ 0.19
SSPO-205ENST00000475488 ATP2A1O14983 1001 aa16.22■□□□□ 0.19
SSPO-205ENST00000475488 KRT28Q7Z3Y7 464 aa16.22■□□□□ 0.19
SSPO-205ENST00000475488 GEN1Q17RS7 908 aa16.22■□□□□ 0.19
SSPO-205ENST00000475488 DNAAF4Q8WXU2 420 aa16.22■□□□□ 0.19
SSPO-205ENST00000475488 NOL3O60936 208 aaKnown RBP16.22■□□□□ 0.19
SSPO-205ENST00000475488 GABPAQ06546 454 aa16.22■□□□□ 0.19
SSPO-205ENST00000475488 HFM1A2PYH4 1435 aa16.22■□□□□ 0.19
SSPO-205ENST00000475488 KIF5AQ12840 1032 aa16.22■□□□□ 0.19
SSPO-205ENST00000475488 EHBP1Q8NDI1 1231 aa16.22■□□□□ 0.19
SSPO-205ENST00000475488 FOXO3O43524 673 aa16.21■□□□□ 0.19
SSPO-205ENST00000475488 SPOUT1Q5T280 376 aaKnown RBP16.21■□□□□ 0.19
SSPO-205ENST00000475488 RAB11FIP4Q86YS3 637 aa16.21■□□□□ 0.19
SSPO-205ENST00000475488 ATP5J2-PTCD1G3V325 749 aa16.21■□□□□ 0.19
SSPO-205ENST00000475488 NBPF1Q3BBV0 1214 aa16.21■□□□□ 0.19
SSPO-205ENST00000475488 GSDMDP57764 484 aa16.21■□□□□ 0.19
SSPO-205ENST00000475488 C8orf37Q96NL8 207 aa16.21■□□□□ 0.19
SSPO-205ENST00000475488 KRT23Q9C075 422 aa16.21■□□□□ 0.19
SSPO-205ENST00000475488 ZBTB24O43167 697 aaPredicted RBP16.21■□□□□ 0.19
SSPO-205ENST00000475488 CYP7A1P22680 504 aa16.21■□□□□ 0.19
SSPO-205ENST00000475488 PLCB3Q01970 1234 aa16.21■□□□□ 0.19
SSPO-205ENST00000475488 WAPLQ7Z5K2 1190 aa16.21■□□□□ 0.19
SSPO-205ENST00000475488 RNF34Q969K3 372 aa16.21■□□□□ 0.19
SSPO-205ENST00000475488 LARP6Q9BRS8 491 aaKnown RBP16.21■□□□□ 0.19
SSPO-205ENST00000475488 SPAG5Q96R06 1193 aa16.21■□□□□ 0.18
SSPO-205ENST00000475488 CGNQ9P2M7 1197 aaKnown RBP16.21■□□□□ 0.18
SSPO-205ENST00000475488 DBF4Q9UBU7 674 aaPredicted RBP16.21■□□□□ 0.18
SSPO-205ENST00000475488 GJA3Q9Y6H8 435 aa16.21■□□□□ 0.18
SSPO-205ENST00000475488 CFAP157Q5JU67 520 aa16.2■□□□□ 0.18
SSPO-205ENST00000475488 NAPAP54920 295 aa16.2■□□□□ 0.18
SSPO-205ENST00000475488 CUL4BQ13620 913 aa16.2■□□□□ 0.18
SSPO-205ENST00000475488 SMC6Q96SB8 1091 aa16.2■□□□□ 0.18
SSPO-205ENST00000475488 SNRKQ9NRH2 765 aa16.2■□□□□ 0.18
SSPO-205ENST00000475488 RBM25P49756 843 aaKnown RBP16.2■□□□□ 0.18
SSPO-205ENST00000475488 NYXQ9GZU5 481 aa16.2■□□□□ 0.18
SSPO-205ENST00000475488 GPHNQ9NQX3 736 aaPredicted RBP16.2■□□□□ 0.18
SSPO-205ENST00000475488 CIZ1Q9ULV3 898 aaPredicted RBP16.2■□□□□ 0.18
SSPO-205ENST00000475488 CCDC65Q8IXS2 484 aa16.2■□□□□ 0.18
SSPO-205ENST00000475488 GTPBP4Q9BZE4 634 aaKnown RBP16.2■□□□□ 0.18
SSPO-205ENST00000475488 AFMP43652 599 aa16.2■□□□□ 0.18
SSPO-205ENST00000475488 ZNF408Q9H9D4 720 aa16.2■□□□□ 0.18
SSPO-205ENST00000475488 UQCRFS1P1P0C7P4 283 aa16.19■□□□□ 0.18
SSPO-205ENST00000475488 TNNI2P48788 182 aa16.19■□□□□ 0.18
SSPO-205ENST00000475488 SP4Q02446 784 aa16.19■□□□□ 0.18
SSPO-205ENST00000475488 POLA1P09884 1462 aaPredicted RBP16.19■□□□□ 0.18
SSPO-205ENST00000475488 ATP2C2O75185 946 aa16.19■□□□□ 0.18
SSPO-205ENST00000475488 CACYBPQ9HB71 228 aaKnown RBP16.19■□□□□ 0.18
SSPO-205ENST00000475488 SLC4A4Q9Y6R1 1079 aa16.19■□□□□ 0.18
SSPO-205ENST00000475488 LRRC9Q6ZRR7 1453 aa16.19■□□□□ 0.18
SSPO-205ENST00000475488 RASA3Q14644 834 aa16.19■□□□□ 0.18
SSPO-205ENST00000475488 PPP1R9BQ96SB3 815 aa16.19■□□□□ 0.18
SSPO-205ENST00000475488 NOC2LQ9Y3T9 749 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms