RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 AIMP1Q12904 312 aaKnown RBP26.88■■□□□ 1.89
VPS36-203ENST00000475375 DDX46Q7L014 1031 aaKnown RBP26.88■■□□□ 1.89
VPS36-203ENST00000475375 LRP10Q7Z4F1 713 aa26.88■■□□□ 1.89
VPS36-203ENST00000475375 SP8Q8IXZ3 490 aa26.88■■□□□ 1.89
VPS36-203ENST00000475375 NECTIN2Q92692 538 aa26.88■■□□□ 1.89
VPS36-203ENST00000475375 TNIP1Q15025 636 aa26.87■■□□□ 1.89
VPS36-203ENST00000475375 HSP90AB3PQ58FF7 597 aa26.87■■□□□ 1.89
VPS36-203ENST00000475375 SAPCD2Q86UD0 394 aa26.87■■□□□ 1.89
VPS36-203ENST00000475375 KIAA2012Q0VF49 1180 aa26.86■■□□□ 1.89
VPS36-203ENST00000475375 TRMT112Q9UI30 125 aaKnown RBP26.86■■□□□ 1.89
VPS36-203ENST00000475375 RIPK4P57078 832 aa26.85■■□□□ 1.89
VPS36-203ENST00000475375 COPS6Q7L5N1 327 aa26.85■■□□□ 1.89
VPS36-203ENST00000475375 NLRP10Q86W26 655 aa26.85■■□□□ 1.89
VPS36-203ENST00000475375 XAGE3Q8WTP9 111 aa26.84■■□□□ 1.89
VPS36-203ENST00000475375 CDHR2Q9BYE9 1310 aa26.84■■□□□ 1.89
VPS36-203ENST00000475375 GRAPQ13588 217 aa26.83■■□□□ 1.89
VPS36-203ENST00000475375 GRAPLQ8TC17 118 aaPredicted RBP26.83■■□□□ 1.89
VPS36-203ENST00000475375 CA12O43570 354 aa26.82■■□□□ 1.88
VPS36-203ENST00000475375 TRPM4Q8TD43 1214 aa26.82■■□□□ 1.88
VPS36-203ENST00000475375 ZC3H15Q8WU90 426 aaKnown RBP26.82■■□□□ 1.88
VPS36-203ENST00000475375 ZNF428Q96B54 188 aa26.82■■□□□ 1.88
VPS36-203ENST00000475375 CNOT7Q9UIV1 285 aaKnown RBP26.82■■□□□ 1.88
VPS36-203ENST00000475375 SH3TC1Q8TE82 1336 aa26.82■■□□□ 1.88
VPS36-203ENST00000475375 H7C1D1 291 aa26.81■■□□□ 1.88
VPS36-203ENST00000475375 CDC37L1Q7L3B6 337 aa26.81■■□□□ 1.88
VPS36-203ENST00000475375 PGAP2Q9UHJ9 254 aa26.81■■□□□ 1.88
VPS36-203ENST00000475375 HIRAP54198 1017 aaPredicted RBP26.8■■□□□ 1.88
VPS36-203ENST00000475375 MLLT1Q03111 559 aaPredicted RBP26.8■■□□□ 1.88
VPS36-203ENST00000475375 TCIRG1Q13488 830 aa26.8■■□□□ 1.88
VPS36-203ENST00000475375 HHIPL1Q96JK4 782 aa26.8■■□□□ 1.88
VPS36-203ENST00000475375 CFAP44Q96MT7 982 aa26.8■■□□□ 1.88
VPS36-203ENST00000475375 BABAM1Q9NWV8 329 aa26.8■■□□□ 1.88
VPS36-203ENST00000475375 LMOD3Q0VAK6 560 aa26.79■■□□□ 1.88
VPS36-203ENST00000475375 LAMB2P55268 1798 aa26.79■■□□□ 1.88
VPS36-203ENST00000475375 SHTN1A0MZ66 631 aa26.78■■□□□ 1.88
VPS36-203ENST00000475375 BRPF1P55201 1214 aaPredicted RBP26.78■■□□□ 1.88
VPS36-203ENST00000475375 MICALL2Q8IY33 904 aa26.78■■□□□ 1.88
VPS36-203ENST00000475375 ANKRD36CQ5JPF3 1778 aa26.77■■□□□ 1.88
VPS36-203ENST00000475375 YDJCA8MPS7 323 aa26.77■■□□□ 1.88
VPS36-203ENST00000475375 TMC4Q7Z404 712 aa26.77■■□□□ 1.88
VPS36-203ENST00000475375 USP48Q86UV5 1035 aa26.77■■□□□ 1.88
VPS36-203ENST00000475375 ZBTB12Q9Y330 459 aaPredicted RBP26.76■■□□□ 1.87
VPS36-203ENST00000475375 TMPOP42166 694 aaKnown RBP26.75■■□□□ 1.87
VPS36-203ENST00000475375 WASHC4Q2M389 1173 aa26.75■■□□□ 1.87
VPS36-203ENST00000475375 MCOLN1Q9GZU1 580 aa26.75■■□□□ 1.87
VPS36-203ENST00000475375 LAS1LQ9Y4W2 734 aaKnown RBP26.75■■□□□ 1.87
VPS36-203ENST00000475375 HUNKP57058 714 aa26.74■■□□□ 1.87
VPS36-203ENST00000475375 NEUROD2Q15784 382 aa26.74■■□□□ 1.87
VPS36-203ENST00000475375 DBNDD1Q9H9R9 158 aa26.74■■□□□ 1.87
VPS36-203ENST00000475375 NSFL1CQ9UNZ2 370 aaKnown RBP26.74■■□□□ 1.87
VPS36-203ENST00000475375 PSMD14O00487 310 aa26.73■■□□□ 1.87
VPS36-203ENST00000475375 RIMBP2O15034 1052 aa26.73■■□□□ 1.87
VPS36-203ENST00000475375 NOGQ13253 232 aa26.73■■□□□ 1.87
VPS36-203ENST00000475375 KRT24Q2M2I5 525 aa26.73■■□□□ 1.87
VPS36-203ENST00000475375 SAMD7Q7Z3H4 446 aa26.73■■□□□ 1.87
VPS36-203ENST00000475375 CHPF2Q9P2E5 772 aa26.73■■□□□ 1.87
VPS36-203ENST00000475375 C6orf229H3BNL8 230 aa26.72■■□□□ 1.87
VPS36-203ENST00000475375 DGKZQ13574 1117 aa26.72■■□□□ 1.87
VPS36-203ENST00000475375 TBC1D10BQ4KMP7 808 aaPredicted RBP26.72■■□□□ 1.87
VPS36-203ENST00000475375 DLK2Q6UY11 383 aa26.72■■□□□ 1.87
VPS36-203ENST00000475375 TAF1P21675 1872 aa26.72■■□□□ 1.87
VPS36-203ENST00000475375 DUOX1Q9NRD9 1551 aa26.71■■□□□ 1.87
VPS36-203ENST00000475375 KRT26Q7Z3Y9 468 aa26.71■■□□□ 1.87
VPS36-203ENST00000475375 DPF2Q92785 391 aa26.71■■□□□ 1.87
VPS36-203ENST00000475375 FAM89AQ96GI7 184 aa26.71■■□□□ 1.87
VPS36-203ENST00000475375 RGS19P49795 217 aa26.7■■□□□ 1.86
VPS36-203ENST00000475375 RBM26Q5T8P6 1007 aaKnown RBP26.7■■□□□ 1.86
VPS36-203ENST00000475375 PLBD2Q8NHP8 589 aa26.7■■□□□ 1.86
VPS36-203ENST00000475375 CELF1Q92879 486 aaKnown RBP26.7■■□□□ 1.86
VPS36-203ENST00000475375 ZIC5Q96T25 663 aa26.7■■□□□ 1.86
VPS36-203ENST00000475375 CASP8AP2Q9UKL3 1982 aa26.69■■□□□ 1.86
VPS36-203ENST00000475375 ATP5J2-PTCD1G3V325 749 aa26.69■■□□□ 1.86
VPS36-203ENST00000475375 SLC34A2O95436 690 aa26.69■■□□□ 1.86
VPS36-203ENST00000475375 RTL5Q5HYW3 569 aaPredicted RBP26.69■■□□□ 1.86
VPS36-203ENST00000475375 HDGFL1Q5TGJ6 251 aa26.69■■□□□ 1.86
VPS36-203ENST00000475375 CCDC146Q8IYE0 955 aa26.69■■□□□ 1.86
VPS36-203ENST00000475375 DOK7Q18PE1 504 aa26.68■■□□□ 1.86
VPS36-203ENST00000475375 ANKRD13DQ6ZTN6 518 aa26.68■■□□□ 1.86
VPS36-203ENST00000475375 DCPSQ96C86 337 aaKnown RBP26.68■■□□□ 1.86
VPS36-203ENST00000475375 CHL1O00533 1208 aa26.67■■□□□ 1.86
VPS36-203ENST00000475375 ECE2O60344 883 aa26.67■■□□□ 1.86
VPS36-203ENST00000475375 GPSM2P81274 684 aa26.67■■□□□ 1.86
VPS36-203ENST00000475375 C2orf69Q8N8R5 385 aa26.67■■□□□ 1.86
VPS36-203ENST00000475375 EYA3Q99504 573 aa26.67■■□□□ 1.86
VPS36-203ENST00000475375 GBA2Q9HCG7 927 aaPredicted RBP26.67■■□□□ 1.86
VPS36-203ENST00000475375 POLLQ9UGP5 575 aa26.67■■□□□ 1.86
VPS36-203ENST00000475375 LRRC37AA6NMS7 1700 aa26.67■■□□□ 1.86
VPS36-203ENST00000475375 EGFRP00533 1210 aa26.66■■□□□ 1.86
VPS36-203ENST00000475375 RPS12P25398 132 aaKnown RBP26.66■■□□□ 1.86
VPS36-203ENST00000475375 SF3B3Q15393 1217 aaKnown RBP26.66■■□□□ 1.86
VPS36-203ENST00000475375 RGMBQ6NW40 437 aa26.66■■□□□ 1.86
VPS36-203ENST00000475375 ADM5C9JUS6 153 aa26.65■■□□□ 1.86
VPS36-203ENST00000475375 ISCA1Q9BUE6 129 aa26.65■■□□□ 1.86
VPS36-203ENST00000475375 KCNQ5Q9NR82 932 aa26.65■■□□□ 1.86
VPS36-203ENST00000475375 RALBP1Q15311 655 aa26.64■■□□□ 1.86
VPS36-203ENST00000475375 DBF4Q9UBU7 674 aaPredicted RBP26.64■■□□□ 1.86
VPS36-203ENST00000475375 DDX60Q8IY21 1712 aaKnown RBP26.64■■□□□ 1.85
VPS36-203ENST00000475375 G3V3G9 751 aa26.63■■□□□ 1.85
VPS36-203ENST00000475375 ZNF157P51786 506 aaPredicted RBP26.63■■□□□ 1.85
VPS36-203ENST00000475375 DCAF8Q5TAQ9 597 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms