RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 TRIM28Q13263 835 aaKnown RBP15.8■□□□□ 0.12
SSR1-205ENST00000475213 GRIPAP1Q4V328 841 aa15.8■□□□□ 0.12
SSR1-205ENST00000475213 SMC1BQ8NDV3 1235 aa15.8■□□□□ 0.12
SSR1-205ENST00000475213 FAM89AQ96GI7 184 aa15.8■□□□□ 0.12
SSR1-205ENST00000475213 SALL2Q9Y467 1007 aaPredicted RBP15.8■□□□□ 0.12
SSR1-205ENST00000475213 SCN4AP35499 1836 aa15.8■□□□□ 0.12
SSR1-205ENST00000475213 ZNF541Q9H0D2 1346 aa15.79■□□□□ 0.12
SSR1-205ENST00000475213 FXR2P51116 673 aaKnown RBP eCLIP15.79■□□□□ 0.121e-6■□□□□ 10.3
SSR1-205ENST00000475213 ATP6V0A2Q9Y487 856 aa15.79■□□□□ 0.12
SSR1-205ENST00000475213 FZD9O00144 591 aa15.78■□□□□ 0.12
SSR1-205ENST00000475213 BBOX1O75936 387 aa15.78■□□□□ 0.12
SSR1-205ENST00000475213 TWISTNBQ3B726 338 aaPredicted RBP15.78■□□□□ 0.12
SSR1-205ENST00000475213 DDX46Q7L014 1031 aaKnown RBP15.78■□□□□ 0.12
SSR1-205ENST00000475213 FAM9BQ8IZU0 186 aa15.78■□□□□ 0.12
SSR1-205ENST00000475213 MYD88Q99836 296 aa15.78■□□□□ 0.12
SSR1-205ENST00000475213 COL4A5P29400 1685 aa15.78■□□□□ 0.12
SSR1-205ENST00000475213 CACNA1FO60840 1977 aa15.78■□□□□ 0.12
SSR1-205ENST00000475213 GRAPQ13588 217 aa15.77■□□□□ 0.12
SSR1-205ENST00000475213 RTL5Q5HYW3 569 aaPredicted RBP15.77■□□□□ 0.12
SSR1-205ENST00000475213 WDR63Q8IWG1 891 aa15.77■□□□□ 0.12
SSR1-205ENST00000475213 GRAPLQ8TC17 118 aaPredicted RBP15.77■□□□□ 0.12
SSR1-205ENST00000475213 JDP2Q8WYK2 163 aa15.77■□□□□ 0.12
SSR1-205ENST00000475213 L3MBTL3Q96JM7 780 aaPredicted RBP15.77■□□□□ 0.12
SSR1-205ENST00000475213 TMX4Q9H1E5 349 aaPredicted RBP15.77■□□□□ 0.12
SSR1-205ENST00000475213 FANCIQ9NVI1 1328 aa15.76■□□□□ 0.11
SSR1-205ENST00000475213 IRS4O14654 1257 aaPredicted RBP15.76■□□□□ 0.11
SSR1-205ENST00000475213 DDX58O95786 925 aaKnown RBP15.76■□□□□ 0.11
SSR1-205ENST00000475213 SF3B3Q15393 1217 aaKnown RBP15.76■□□□□ 0.11
SSR1-205ENST00000475213 SP8Q8IXZ3 490 aa15.76■□□□□ 0.11
SSR1-205ENST00000475213 ZBTB38Q8NAP3 1195 aaPredicted RBP15.76■□□□□ 0.11
SSR1-205ENST00000475213 SPDYE1Q8NFV5 336 aaPredicted RBP15.76■□□□□ 0.11
SSR1-205ENST00000475213 METTL22Q9BUU2 404 aaPredicted RBP15.76■□□□□ 0.11
SSR1-205ENST00000475213 STK31Q9BXU1 1019 aa15.76■□□□□ 0.11
SSR1-205ENST00000475213 IQCA1LA6NCM1 817 aa15.75■□□□□ 0.11
SSR1-205ENST00000475213 LARGE2Q8N3Y3 721 aa15.75■□□□□ 0.11
SSR1-205ENST00000475213 CCDC191Q8NCU4 936 aa15.75■□□□□ 0.11
SSR1-205ENST00000475213 CLEC11AQ9Y240 323 aa15.75■□□□□ 0.11
SSR1-205ENST00000475213 MAP3K2Q9Y2U5 619 aa15.75■□□□□ 0.11
SSR1-205ENST00000475213 LRRC37AA6NMS7 1700 aa15.74■□□□□ 0.11
SSR1-205ENST00000475213 PI4KAP2A4QPH2 592 aa15.74■□□□□ 0.11
SSR1-205ENST00000475213 KSR2Q6VAB6 950 aa15.74■□□□□ 0.11
SSR1-205ENST00000475213 PI4KAP1Q8N8J0 262 aa15.74■□□□□ 0.11
SSR1-205ENST00000475213 RTFDC1Q9BY42 306 aaPredicted RBP15.74■□□□□ 0.11
SSR1-205ENST00000475213 COL4A1P02462 1669 aa15.73■□□□□ 0.11
SSR1-205ENST00000475213 PPIP5K2O43314 1243 aa15.73■□□□□ 0.11
SSR1-205ENST00000475213 PCCAP05165 728 aaPredicted RBP15.73■□□□□ 0.11
SSR1-205ENST00000475213 POTEIP0CG38 1075 aa15.73■□□□□ 0.11
SSR1-205ENST00000475213 POTEJP0CG39 1038 aa15.73■□□□□ 0.11
SSR1-205ENST00000475213 EIF6P56537 245 aaKnown RBP15.73■□□□□ 0.11
SSR1-205ENST00000475213 HTRA3P83110 453 aa15.73■□□□□ 0.11
SSR1-205ENST00000475213 AOC3Q16853 763 aa15.73■□□□□ 0.11
SSR1-205ENST00000475213 DPP8Q6V1X1 898 aaPredicted RBP15.73■□□□□ 0.11
SSR1-205ENST00000475213 G2E3Q7L622 706 aa15.73■□□□□ 0.11
SSR1-205ENST00000475213 TMC4Q7Z404 712 aa15.73■□□□□ 0.11
SSR1-205ENST00000475213 GPC2Q8N158 579 aa15.73■□□□□ 0.11
SSR1-205ENST00000475213 MPNDQ8N594 471 aa15.73■□□□□ 0.11
SSR1-205ENST00000475213 DNAJC5GQ8N7S2 189 aa15.73■□□□□ 0.11
SSR1-205ENST00000475213 SUPT20HQ8NEM7 779 aa15.73■□□□□ 0.11
SSR1-205ENST00000475213 CELF1Q92879 486 aaKnown RBP15.73■□□□□ 0.11
SSR1-205ENST00000475213 VPS33BQ9H267 617 aa15.73■□□□□ 0.11
SSR1-205ENST00000475213 TAF1DQ9H5J8 278 aaPredicted RBP15.73■□□□□ 0.11
SSR1-205ENST00000475213 CWC25Q9NXE8 425 aaPredicted RBP15.73■□□□□ 0.11
SSR1-205ENST00000475213 EXOSC9Q06265 439 aaKnown RBP15.72■□□□□ 0.11
SSR1-205ENST00000475213 NIM1KQ8IY84 436 aa15.72■□□□□ 0.11
SSR1-205ENST00000475213 JARID2Q92833 1246 aaPredicted RBP15.72■□□□□ 0.11
SSR1-205ENST00000475213 HACL1Q9UJ83 578 aa15.72■□□□□ 0.11
SSR1-205ENST00000475213 MYH3P11055 1940 aa15.71■□□□□ 0.11
SSR1-205ENST00000475213 VAMP4O75379 141 aa15.71■□□□□ 0.11
SSR1-205ENST00000475213 IGKV5-2P06315 115 aa15.71■□□□□ 0.11
SSR1-205ENST00000475213 HSP90B1P14625 803 aaKnown RBP15.71■□□□□ 0.11
SSR1-205ENST00000475213 CHADLQ6NUI6 762 aa15.71■□□□□ 0.11
SSR1-205ENST00000475213 GJA3Q9Y6H8 435 aa15.71■□□□□ 0.11
SSR1-205ENST00000475213 DUOX1Q9NRD9 1551 aa15.7■□□□□ 0.1
SSR1-205ENST00000475213 FLIIQ13045 1269 aa15.7■□□□□ 0.1
SSR1-205ENST00000475213 LTBP1Q14766 1721 aa15.7■□□□□ 0.1
SSR1-205ENST00000475213 ADAMTSL1Q8N6G6 1762 aa15.7■□□□□ 0.1
SSR1-205ENST00000475213 PDE8AO60658 829 aa15.69■□□□□ 0.1
SSR1-205ENST00000475213 EPHX2P34913 555 aa15.69■□□□□ 0.1
SSR1-205ENST00000475213 RPS8P62241 208 aaKnown RBP15.69■□□□□ 0.1
SSR1-205ENST00000475213 KIAA2012Q0VF49 1180 aa15.69■□□□□ 0.1
SSR1-205ENST00000475213 NEXNQ0ZGT2 675 aa15.69■□□□□ 0.1
SSR1-205ENST00000475213 EAPPQ56P03 285 aaPredicted RBP15.69■□□□□ 0.1
SSR1-205ENST00000475213 LDHDQ86WU2 507 aa15.69■□□□□ 0.1
SSR1-205ENST00000475213 SEC31BQ9NQW1 1179 aa15.69■□□□□ 0.1
SSR1-205ENST00000475213 CDHR2Q9BYE9 1310 aa15.68■□□□□ 0.1
SSR1-205ENST00000475213 NEURL1BA8MQ27 555 aa15.68■□□□□ 0.1
SSR1-205ENST00000475213 CWF19L2Q2TBE0 894 aaKnown RBP15.68■□□□□ 0.1
SSR1-205ENST00000475213 CCDC152Q4G0S7 254 aa15.68■□□□□ 0.1
SSR1-205ENST00000475213 MYH16Q9H6N6 1097 aa15.68■□□□□ 0.1
SSR1-205ENST00000475213 ZNRF3Q9ULT6 936 aa15.68■□□□□ 0.1
SSR1-205ENST00000475213 NSFL1CQ9UNZ2 370 aaKnown RBP15.68■□□□□ 0.1
SSR1-205ENST00000475213 SCNN1DP51172 638 aa15.67■□□□□ 0.1
SSR1-205ENST00000475213 GPSM2P81274 684 aa15.67■□□□□ 0.1
SSR1-205ENST00000475213 CXCL9Q07325 125 aa15.67■□□□□ 0.1
SSR1-205ENST00000475213 FKBP5Q13451 457 aaPredicted RBP15.67■□□□□ 0.1
SSR1-205ENST00000475213 KLRG1Q96E93 195 aa15.67■□□□□ 0.1
SSR1-205ENST00000475213 CCDC85AQ96PX6 553 aaPredicted RBP15.67■□□□□ 0.1
SSR1-205ENST00000475213 PCNTO95613 3336 aa15.67■□□□□ 0.1
SSR1-205ENST00000475213 ZNF521Q96K83 1311 aa15.67■□□□□ 0.1
SSR1-205ENST00000475213 LMOD1P29536 600 aaPredicted RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms