RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 GPRC5DQ9NZD1 345 aa32.52■■■□□ 2.8
TMEM54-205ENST00000475208 WDR33Q9C0J8 1336 aaKnown RBP32.51■■■□□ 2.8
TMEM54-205ENST00000475208 WDR43Q15061 677 aaKnown RBP eCLIP32.51■■■□□ 2.79
TMEM54-205ENST00000475208 ADARB2Q9NS39 739 aaKnown RBP32.51■■■□□ 2.79
TMEM54-205ENST00000475208 HDGFL1Q5TGJ6 251 aa32.5■■■□□ 2.79
TMEM54-205ENST00000475208 ZNF428Q96B54 188 aa32.5■■■□□ 2.79
TMEM54-205ENST00000475208 TRAF5O00463 557 aa32.49■■■□□ 2.79
TMEM54-205ENST00000475208 KIAA2012Q0VF49 1180 aa32.49■■■□□ 2.79
TMEM54-205ENST00000475208 GMPSP49915 693 aaPredicted RBP32.48■■■□□ 2.79
TMEM54-205ENST00000475208 HOXB7P09629 217 aa32.47■■■□□ 2.79
TMEM54-205ENST00000475208 PLBD2Q8NHP8 589 aa32.47■■■□□ 2.79
TMEM54-205ENST00000475208 TAF1P21675 1872 aa32.46■■■□□ 2.79
TMEM54-205ENST00000475208 TRPM7Q96QT4 1865 aa32.46■■■□□ 2.79
TMEM54-205ENST00000475208 LBX1P52954 281 aa32.46■■■□□ 2.79
TMEM54-205ENST00000475208 CIAPIN1Q6FI81 312 aa32.46■■■□□ 2.79
TMEM54-205ENST00000475208 DDX60Q8IY21 1712 aaKnown RBP32.46■■■□□ 2.79
TMEM54-205ENST00000475208 DUOX1Q9NRD9 1551 aa32.45■■■□□ 2.79
TMEM54-205ENST00000475208 MAP2K1Q02750 393 aaPredicted RBP32.45■■■□□ 2.79
TMEM54-205ENST00000475208 CST9Q5W186 159 aa32.45■■■□□ 2.79
TMEM54-205ENST00000475208 PAXIP1Q6ZW49 1069 aaPredicted RBP32.45■■■□□ 2.79
TMEM54-205ENST00000475208 THSD7BQ9C0I4 1608 aa32.44■■■□□ 2.78
TMEM54-205ENST00000475208 LRRC37AA6NMS7 1700 aa32.44■■■□□ 2.78
TMEM54-205ENST00000475208 RAD17O75943 681 aa32.44■■■□□ 2.78
TMEM54-205ENST00000475208 ANKRD13DQ6ZTN6 518 aa32.44■■■□□ 2.78
TMEM54-205ENST00000475208 TMC4Q7Z404 712 aa32.44■■■□□ 2.78
TMEM54-205ENST00000475208 CAPNS2Q96L46 248 aa32.44■■■□□ 2.78
TMEM54-205ENST00000475208 DBF4Q9UBU7 674 aaPredicted RBP32.44■■■□□ 2.78
TMEM54-205ENST00000475208 ADAMTS8Q9UP79 889 aa32.44■■■□□ 2.78
TMEM54-205ENST00000475208 CDHR2Q9BYE9 1310 aa32.44■■■□□ 2.78
TMEM54-205ENST00000475208 HSPA8P11142 646 aaKnown RBP32.43■■■□□ 2.78
TMEM54-205ENST00000475208 ISCA1Q9BUE6 129 aa32.43■■■□□ 2.78
TMEM54-205ENST00000475208 ATP5J2-PTCD1G3V325 749 aa32.42■■■□□ 2.78
TMEM54-205ENST00000475208 TNIP1Q15025 636 aa32.42■■■□□ 2.78
TMEM54-205ENST00000475208 BCL2L13Q9BXK5 485 aa32.42■■■□□ 2.78
TMEM54-205ENST00000475208 ECE1P42892 770 aa32.41■■■□□ 2.78
TMEM54-205ENST00000475208 GRM1Q13255 1194 aa32.41■■■□□ 2.78
TMEM54-205ENST00000475208 CYP4F22Q6NT55 531 aa32.41■■■□□ 2.78
TMEM54-205ENST00000475208 FAM89AQ96GI7 184 aa32.41■■■□□ 2.78
TMEM54-205ENST00000475208 DUSP27Q5VZP5 1158 aa32.4■■■□□ 2.78
TMEM54-205ENST00000475208 CFAP44Q96MT7 982 aa32.4■■■□□ 2.78
TMEM54-205ENST00000475208 TLL2Q9Y6L7 1015 aa32.4■■■□□ 2.78
TMEM54-205ENST00000475208 YDJCA8MPS7 323 aa32.39■■■□□ 2.78
TMEM54-205ENST00000475208 HYPKQ9NX55 129 aa32.39■■■□□ 2.78
TMEM54-205ENST00000475208 SF3B3Q15393 1217 aaKnown RBP32.38■■■□□ 2.77
TMEM54-205ENST00000475208 CELF1Q92879 486 aaKnown RBP32.38■■■□□ 2.77
TMEM54-205ENST00000475208 GLIS2Q9BZE0 524 aaPredicted RBP32.38■■■□□ 2.77
TMEM54-205ENST00000475208 TRPM4Q8TD43 1214 aa32.37■■■□□ 2.77
TMEM54-205ENST00000475208 MBIPQ9NS73 344 aa32.37■■■□□ 2.77
TMEM54-205ENST00000475208 PGAP2Q9UHJ9 254 aa32.37■■■□□ 2.77
TMEM54-205ENST00000475208 CELF2O95319 508 aaKnown RBP32.36■■■□□ 2.77
TMEM54-205ENST00000475208 RTL5Q5HYW3 569 aaPredicted RBP32.36■■■□□ 2.77
TMEM54-205ENST00000475208 GPR101Q96P66 508 aaPredicted RBP32.36■■■□□ 2.77
TMEM54-205ENST00000475208 COL4A1P02462 1669 aa32.35■■■□□ 2.77
TMEM54-205ENST00000475208 HIRAP54198 1017 aaPredicted RBP32.35■■■□□ 2.77
TMEM54-205ENST00000475208 CNOT7Q9UIV1 285 aaKnown RBP32.35■■■□□ 2.77
TMEM54-205ENST00000475208 NSFL1CQ9UNZ2 370 aaKnown RBP32.35■■■□□ 2.77
TMEM54-205ENST00000475208 SHTN1A0MZ66 631 aa32.34■■■□□ 2.77
TMEM54-205ENST00000475208 WASHC4Q2M389 1173 aa32.34■■■□□ 2.77
TMEM54-205ENST00000475208 ZC3H15Q8WU90 426 aaKnown RBP32.34■■■□□ 2.77
TMEM54-205ENST00000475208 TRIM28Q13263 835 aaKnown RBP32.33■■■□□ 2.77
TMEM54-205ENST00000475208 BEGAINQ9BUH8 593 aa32.33■■■□□ 2.77
TMEM54-205ENST00000475208 IRS4O14654 1257 aaPredicted RBP32.32■■■□□ 2.76
TMEM54-205ENST00000475208 SAPCD2Q86UD0 394 aa32.32■■■□□ 2.76
TMEM54-205ENST00000475208 MICALL2Q8IY33 904 aa32.32■■■□□ 2.76
TMEM54-205ENST00000475208 DBNDD1Q9H9R9 158 aa32.32■■■□□ 2.76
TMEM54-205ENST00000475208 ZBTB12Q9Y330 459 aaPredicted RBP32.32■■■□□ 2.76
TMEM54-205ENST00000475208 C6orf229H3BNL8 230 aa32.31■■■□□ 2.76
TMEM54-205ENST00000475208 H7C1D1 291 aa32.31■■■□□ 2.76
TMEM54-205ENST00000475208 GPSM2P81274 684 aa32.31■■■□□ 2.76
TMEM54-205ENST00000475208 ZNF408Q9H9D4 720 aa32.31■■■□□ 2.76
TMEM54-205ENST00000475208 RIMBP2O15034 1052 aa32.3■■■□□ 2.76
TMEM54-205ENST00000475208 AOC2O75106 756 aa32.3■■■□□ 2.76
TMEM54-205ENST00000475208 ZNF853P0CG23 659 aa32.3■■■□□ 2.76
TMEM54-205ENST00000475208 GOLGA2Q08379 1002 aa32.3■■■□□ 2.76
TMEM54-205ENST00000475208 RIC3Q7Z5B4 369 aa32.3■■■□□ 2.76
TMEM54-205ENST00000475208 POLLQ9UGP5 575 aa32.3■■■□□ 2.76
TMEM54-205ENST00000475208 PSMD14O00487 310 aa32.29■■■□□ 2.76
TMEM54-205ENST00000475208 CDC37L1Q7L3B6 337 aa32.29■■■□□ 2.76
TMEM54-205ENST00000475208 PRKRIP1Q9H875 184 aaPredicted RBP32.28■■■□□ 2.76
TMEM54-205ENST00000475208 IFT57Q9NWB7 429 aa32.28■■■□□ 2.76
TMEM54-205ENST00000475208 MAP2K2P36507 400 aa32.27■■■□□ 2.76
TMEM54-205ENST00000475208 DPF2Q92785 391 aa32.27■■■□□ 2.76
TMEM54-205ENST00000475208 EYA3Q99504 573 aa32.27■■■□□ 2.76
TMEM54-205ENST00000475208 PHAXQ9H814 394 aaKnown RBP32.27■■■□□ 2.76
TMEM54-205ENST00000475208 APAF1O14727 1248 aa32.26■■■□□ 2.75
TMEM54-205ENST00000475208 ECE2O60344 883 aa32.26■■■□□ 2.75
TMEM54-205ENST00000475208 RPS8P62241 208 aaKnown RBP32.26■■■□□ 2.75
TMEM54-205ENST00000475208 ZBTB38Q8NAP3 1195 aaPredicted RBP32.26■■■□□ 2.75
TMEM54-205ENST00000475208 HHIPL1Q96JK4 782 aa32.26■■■□□ 2.75
TMEM54-205ENST00000475208 ELL2O00472 640 aaPredicted RBP32.25■■■□□ 2.75
TMEM54-205ENST00000475208 GNAI1P63096 354 aa32.25■■■□□ 2.75
TMEM54-205ENST00000475208 SAMD7Q7Z3H4 446 aa32.25■■■□□ 2.75
TMEM54-205ENST00000475208 CALD1Q05682 793 aaKnown RBP32.24■■■□□ 2.75
TMEM54-205ENST00000475208 DOK7Q18PE1 504 aa32.24■■■□□ 2.75
TMEM54-205ENST00000475208 USP48Q86UV5 1035 aa32.24■■■□□ 2.75
TMEM54-205ENST00000475208 TBC1D16Q8TBP0 767 aa32.24■■■□□ 2.75
TMEM54-205ENST00000475208 ABHD8Q96I13 439 aa32.24■■■□□ 2.75
TMEM54-205ENST00000475208 MYD88Q99836 296 aa32.24■■■□□ 2.75
TMEM54-205ENST00000475208 RTL9Q8NET4 1388 aa32.23■■■□□ 2.75
TMEM54-205ENST00000475208 TBC1D10BQ4KMP7 808 aaPredicted RBP32.23■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms