RNA–Protein interactions for RNA: ENST00000474961.5

DDX39B-217, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 974 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-217ENST00000474961 LINS1Q8NG48 757 aa12.01□□□□□ -0.49
DDX39B-217ENST00000474961 TFCP2L1Q9NZI6 479 aa12.01□□□□□ -0.49
DDX39B-217ENST00000474961 NARFQ9UHQ1 456 aa12.01□□□□□ -0.49
DDX39B-217ENST00000474961 ATP5J2-PTCD1G3V325 749 aa12□□□□□ -0.49
DDX39B-217ENST00000474961 ZPR1O75312 459 aa12□□□□□ -0.49
DDX39B-217ENST00000474961 IGKV5-2P06315 115 aa12□□□□□ -0.49
DDX39B-217ENST00000474961 RFC4P35249 363 aa12□□□□□ -0.49
DDX39B-217ENST00000474961 CWF19L2Q2TBE0 894 aaKnown RBP12□□□□□ -0.49
DDX39B-217ENST00000474961 ISCA1Q9BUE6 129 aa12□□□□□ -0.49
DDX39B-217ENST00000474961 ANO8Q9HCE9 1232 aaPredicted RBP12□□□□□ -0.49
DDX39B-217ENST00000474961 STK32BQ9NY57 414 aa12□□□□□ -0.49
DDX39B-217ENST00000474961 SRP68Q9UHB9 627 aaKnown RBP12□□□□□ -0.49
DDX39B-217ENST00000474961 DDX19BQ9UMR2 479 aa12□□□□□ -0.49
DDX39B-217ENST00000474961 NEURL1BA8MQ27 555 aa11.99□□□□□ -0.49
DDX39B-217ENST00000474961 ZBTB7BO15156 539 aaPredicted RBP11.99□□□□□ -0.49
DDX39B-217ENST00000474961 SLC15A2Q16348 729 aa11.99□□□□□ -0.49
DDX39B-217ENST00000474961 HSP90AB3PQ58FF7 597 aa11.99□□□□□ -0.49
DDX39B-217ENST00000474961 USPL1Q5W0Q7 1092 aa11.99□□□□□ -0.49
DDX39B-217ENST00000474961 FLAD1Q8NFF5 587 aa11.99□□□□□ -0.49
DDX39B-217ENST00000474961 USP42Q9H9J4 1324 aaKnown RBP11.98□□□□□ -0.49
DDX39B-217ENST00000474961 TRIM28Q13263 835 aaKnown RBP11.98□□□□□ -0.49
DDX39B-217ENST00000474961 ERICH6BQ5W0A0 696 aa11.98□□□□□ -0.49
DDX39B-217ENST00000474961 CLEC4GQ6UXB4 293 aa11.98□□□□□ -0.49
DDX39B-217ENST00000474961 COL23A1Q86Y22 540 aaPredicted RBP11.98□□□□□ -0.49
DDX39B-217ENST00000474961 ZNF34Q8IZ26 560 aa11.98□□□□□ -0.49
DDX39B-217ENST00000474961 MEIS3Q99687 375 aa11.98□□□□□ -0.49
DDX39B-217ENST00000474961 USP44Q9H0E7 712 aa11.98□□□□□ -0.49
DDX39B-217ENST00000474961 CHMP4BQ9H444 224 aaKnown RBP11.98□□□□□ -0.49
DDX39B-217ENST00000474961 BCL2L12Q9HB09 334 aa11.98□□□□□ -0.49
DDX39B-217ENST00000474961 ZNF652Q9Y2D9 606 aa11.98□□□□□ -0.49
DDX39B-217ENST00000474961 GTF3C3Q9Y5Q9 886 aa11.98□□□□□ -0.49
DDX39B-217ENST00000474961 IBTKQ9P2D0 1353 aaPredicted RBP11.97□□□□□ -0.49
DDX39B-217ENST00000474961 PNPLA7Q6ZV29 1317 aa11.97□□□□□ -0.49
DDX39B-217ENST00000474961 GPTP24298 496 aa11.97□□□□□ -0.49
DDX39B-217ENST00000474961 GCKRQ14397 625 aa11.97□□□□□ -0.49
DDX39B-217ENST00000474961 CCDC191Q8NCU4 936 aa11.97□□□□□ -0.49
DDX39B-217ENST00000474961 ZBTB40Q9NUA8 1239 aa11.97□□□□□ -0.49
DDX39B-217ENST00000474961 CWC25Q9NXE8 425 aaPredicted RBP11.97□□□□□ -0.49
DDX39B-217ENST00000474961 GRM8O00222 908 aa11.96□□□□□ -0.49
DDX39B-217ENST00000474961 GNAI3P08754 354 aa11.96□□□□□ -0.49
DDX39B-217ENST00000474961 NLRP10Q86W26 655 aa11.96□□□□□ -0.49
DDX39B-217ENST00000474961 TMC2Q8TDI7 906 aa11.96□□□□□ -0.49
DDX39B-217ENST00000474961 C9orf78Q9NZ63 289 aaPredicted RBP11.96□□□□□ -0.49
DDX39B-217ENST00000474961 NIP7Q9Y221 180 aaKnown RBP eCLIP11.96□□□□□ -0.49
DDX39B-217ENST00000474961 COL24A1Q17RW2 1714 aa11.95□□□□□ -0.5
DDX39B-217ENST00000474961 UTYO14607 1347 aa11.95□□□□□ -0.5
DDX39B-217ENST00000474961 UBN2Q6ZU65 1347 aa11.95□□□□□ -0.5
DDX39B-217ENST00000474961 SNPHO15079 494 aa11.95□□□□□ -0.5
DDX39B-217ENST00000474961 GYS1P13807 737 aa11.95□□□□□ -0.5
DDX39B-217ENST00000474961 AAMPQ13685 434 aa11.95□□□□□ -0.5
DDX39B-217ENST00000474961 TBC1D9BQ66K14 1250 aa11.95□□□□□ -0.5
DDX39B-217ENST00000474961 JARID2Q92833 1246 aaPredicted RBP11.95□□□□□ -0.5
DDX39B-217ENST00000474961 H7C1W4 665 aa11.94□□□□□ -0.5
DDX39B-217ENST00000474961 NBPF7P0C2Y1 421 aaPredicted RBP11.94□□□□□ -0.5
DDX39B-217ENST00000474961 UBTFL1P0CB47 393 aaPredicted RBP11.94□□□□□ -0.5
DDX39B-217ENST00000474961 PARP10Q53GL7 1025 aa11.94□□□□□ -0.5
DDX39B-217ENST00000474961 BICDL1Q6ZP65 573 aa11.94□□□□□ -0.5
DDX39B-217ENST00000474961 C1orf115Q9H7X2 142 aa11.94□□□□□ -0.5
DDX39B-217ENST00000474961 MYH3P11055 1940 aa11.94□□□□□ -0.5
DDX39B-217ENST00000474961 GNAI2P04899 355 aa11.93□□□□□ -0.5
DDX39B-217ENST00000474961 PCCAP05165 728 aaPredicted RBP11.93□□□□□ -0.5
DDX39B-217ENST00000474961 CASP7P55210 303 aa11.93□□□□□ -0.5
DDX39B-217ENST00000474961 NFIXQ14938 502 aa11.93□□□□□ -0.5
DDX39B-217ENST00000474961 SUSD4Q5VX71 490 aa11.93□□□□□ -0.5
DDX39B-217ENST00000474961 UBE3BQ7Z3V4 1068 aa11.93□□□□□ -0.5
DDX39B-217ENST00000474961 SETDB2Q96T68 719 aa11.93□□□□□ -0.5
DDX39B-217ENST00000474961 PPP4R2Q9NY27 417 aa11.93□□□□□ -0.5
DDX39B-217ENST00000474961 LRRFIP2Q9Y608 721 aaKnown RBP11.93□□□□□ -0.5
DDX39B-217ENST00000474961 SRCAPQ6ZRS2 3230 aa11.92□□□□□ -0.5
DDX39B-217ENST00000474961 FAM177BA6PVY3 158 aa11.92□□□□□ -0.5
DDX39B-217ENST00000474961 RTL5Q5HYW3 569 aaPredicted RBP11.92□□□□□ -0.5
DDX39B-217ENST00000474961 PPP1R42Q7Z4L9 355 aa11.92□□□□□ -0.5
DDX39B-217ENST00000474961 ZBTB38Q8NAP3 1195 aaPredicted RBP11.92□□□□□ -0.5
DDX39B-217ENST00000474961 SUCLG2Q96I99 432 aa11.92□□□□□ -0.5
DDX39B-217ENST00000474961 UTP14AQ9BVJ6 771 aaKnown RBP11.92□□□□□ -0.5
DDX39B-217ENST00000474961 TRMT112Q9UI30 125 aaKnown RBP11.92□□□□□ -0.5
DDX39B-217ENST00000474961 HDAC5Q9UQL6 1122 aa11.92□□□□□ -0.5
DDX39B-217ENST00000474961 PCDHB15Q9Y5E8 787 aa11.92□□□□□ -0.5
DDX39B-217ENST00000474961 CASZ1Q86V15 1759 aa11.92□□□□□ -0.5
DDX39B-217ENST00000474961 DDX60Q8IY21 1712 aaKnown RBP11.91□□□□□ -0.5
DDX39B-217ENST00000474961 NTSR2O95665 410 aa11.91□□□□□ -0.5
DDX39B-217ENST00000474961 PDE4AP27815 886 aa11.91□□□□□ -0.5
DDX39B-217ENST00000474961 TM4SF1P30408 202 aa11.91□□□□□ -0.5
DDX39B-217ENST00000474961 SYNE4Q8N205 404 aa11.91□□□□□ -0.5
DDX39B-217ENST00000474961 NLGN1Q8N2Q7 840 aa11.91□□□□□ -0.5
DDX39B-217ENST00000474961 FAM89AQ96GI7 184 aa11.91□□□□□ -0.5
DDX39B-217ENST00000474961 LAMB2P55268 1798 aa11.91□□□□□ -0.5
DDX39B-217ENST00000474961 PLCB2Q00722 1185 aa11.9□□□□□ -0.5
DDX39B-217ENST00000474961 KAZALD1Q96I82 304 aa11.9□□□□□ -0.5
DDX39B-217ENST00000474961 PDGFDQ9GZP0 370 aaPredicted RBP11.9□□□□□ -0.5
DDX39B-217ENST00000474961 NYXQ9GZU5 481 aa11.9□□□□□ -0.5
DDX39B-217ENST00000474961 CARMIL3Q8ND23 1372 aa11.9□□□□□ -0.5
DDX39B-217ENST00000474961 SH3TC1Q8TE82 1336 aa11.89□□□□□ -0.51
DDX39B-217ENST00000474961 CDHR2Q9BYE9 1310 aa11.89□□□□□ -0.51
DDX39B-217ENST00000474961 IRS4O14654 1257 aaPredicted RBP11.89□□□□□ -0.51
DDX39B-217ENST00000474961 DDR1Q08345 913 aa11.89□□□□□ -0.51
DDX39B-217ENST00000474961 R3HDM1Q15032 1099 aaKnown RBP11.89□□□□□ -0.51
DDX39B-217ENST00000474961 EPHA10Q5JZY3 1008 aa11.89□□□□□ -0.51
DDX39B-217ENST00000474961 MSL1Q68DK7 614 aa11.89□□□□□ -0.51
DDX39B-217ENST00000474961 CEP85Q6P2H3 762 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms