RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 ECE1P42892 770 aa8.92□□□□□ -0.98
LIMD1-204ENST00000474665 FXR1P51114 621 aaKnown RBP eCLIP8.92□□□□□ -0.98
LIMD1-204ENST00000474665 FKBP5Q13451 457 aaPredicted RBP8.92□□□□□ -0.98
LIMD1-204ENST00000474665 PRR5LQ6MZQ0 368 aa8.92□□□□□ -0.98
LIMD1-204ENST00000474665 RIC3Q7Z5B4 369 aa8.92□□□□□ -0.98
LIMD1-204ENST00000474665 NPM2Q86SE8 214 aaKnown RBP8.92□□□□□ -0.98
LIMD1-204ENST00000474665 TTLL6Q8N841 843 aa8.92□□□□□ -0.98
LIMD1-204ENST00000474665 DNAAF4Q8WXU2 420 aa8.92□□□□□ -0.98
LIMD1-204ENST00000474665 SETDB2Q96T68 719 aa8.92□□□□□ -0.98
LIMD1-204ENST00000474665 NOB1Q9ULX3 412 aaKnown RBP8.92□□□□□ -0.98
LIMD1-204ENST00000474665 ZNF652Q9Y2D9 606 aa8.92□□□□□ -0.98
LIMD1-204ENST00000474665 ABCC12Q96J65 1359 aa8.91□□□□□ -0.98
LIMD1-204ENST00000474665 IQCA1LA6NCM1 817 aa8.91□□□□□ -0.98
LIMD1-204ENST00000474665 NTSR2O95665 410 aa8.91□□□□□ -0.98
LIMD1-204ENST00000474665 TRIM27P14373 513 aa8.91□□□□□ -0.98
LIMD1-204ENST00000474665 CWF19L2Q2TBE0 894 aaKnown RBP8.91□□□□□ -0.98
LIMD1-204ENST00000474665 BEND3Q5T5X7 828 aa8.91□□□□□ -0.98
LIMD1-204ENST00000474665 C3orf67Q6ZVT6 689 aa8.91□□□□□ -0.98
LIMD1-204ENST00000474665 MYD88Q99836 296 aa8.91□□□□□ -0.98
LIMD1-204ENST00000474665 RCAN3Q9UKA8 241 aa8.91□□□□□ -0.98
LIMD1-204ENST00000474665 PTPRCP08575 1304 aa8.9□□□□□ -0.98
LIMD1-204ENST00000474665 FAM177BA6PVY3 158 aa8.9□□□□□ -0.98
LIMD1-204ENST00000474665 NEURL1BA8MQ27 555 aa8.9□□□□□ -0.98
LIMD1-204ENST00000474665 DDX58O95786 925 aaKnown RBP8.9□□□□□ -0.98
LIMD1-204ENST00000474665 RLBP1P12271 317 aa8.9□□□□□ -0.98
LIMD1-204ENST00000474665 NUTM1Q86Y26 1132 aa8.9□□□□□ -0.98
LIMD1-204ENST00000474665 JARID2Q92833 1246 aaPredicted RBP8.9□□□□□ -0.98
LIMD1-204ENST00000474665 LAMB2P55268 1798 aa8.9□□□□□ -0.98
LIMD1-204ENST00000474665 DDX60Q8IY21 1712 aaKnown RBP8.9□□□□□ -0.98
LIMD1-204ENST00000474665 THSD7BQ9C0I4 1608 aa8.9□□□□□ -0.99
LIMD1-204ENST00000474665 TAF1P21675 1872 aa8.89□□□□□ -0.99
LIMD1-204ENST00000474665 IBTKQ9P2D0 1353 aaPredicted RBP8.89□□□□□ -0.99
LIMD1-204ENST00000474665 COL11A2P13942 1736 aaPredicted RBP8.89□□□□□ -0.99
LIMD1-204ENST00000474665 KLRG2A4D1S0 409 aaPredicted RBP8.89□□□□□ -0.99
LIMD1-204ENST00000474665 MAP2K2P36507 400 aa8.89□□□□□ -0.99
LIMD1-204ENST00000474665 CASP7P55210 303 aa8.89□□□□□ -0.99
LIMD1-204ENST00000474665 HSP90AB3PQ58FF7 597 aa8.89□□□□□ -0.99
LIMD1-204ENST00000474665 NBPF5PQ86XG9 351 aaPredicted RBP8.89□□□□□ -0.99
LIMD1-204ENST00000474665 LINS1Q8NG48 757 aa8.89□□□□□ -0.99
LIMD1-204ENST00000474665 ARHGAP45Q92619 1136 aa8.89□□□□□ -0.99
LIMD1-204ENST00000474665 COL4A1P02462 1669 aa8.88□□□□□ -0.99
LIMD1-204ENST00000474665 ABCC4O15439 1325 aa8.88□□□□□ -0.99
LIMD1-204ENST00000474665 H7C1W4 665 aa8.88□□□□□ -0.99
LIMD1-204ENST00000474665 CA12O43570 354 aa8.88□□□□□ -0.99
LIMD1-204ENST00000474665 C21orf2O43822 256 aa8.88□□□□□ -0.99
LIMD1-204ENST00000474665 PLIN1O60240 522 aa8.88□□□□□ -0.99
LIMD1-204ENST00000474665 EPHX2P34913 555 aa8.88□□□□□ -0.99
LIMD1-204ENST00000474665 GCKRQ14397 625 aa8.88□□□□□ -0.99
LIMD1-204ENST00000474665 PARP10Q53GL7 1025 aa8.88□□□□□ -0.99
LIMD1-204ENST00000474665 SLC10A5Q5PT55 438 aa8.88□□□□□ -0.99
LIMD1-204ENST00000474665 ATF7IPQ6VMQ6 1270 aa8.88□□□□□ -0.99
LIMD1-204ENST00000474665 C2CD5Q86YS7 1000 aa8.88□□□□□ -0.99
LIMD1-204ENST00000474665 CNBD1Q8NA66 436 aa8.88□□□□□ -0.99
LIMD1-204ENST00000474665 CCDC191Q8NCU4 936 aa8.88□□□□□ -0.99
LIMD1-204ENST00000474665 SLC17A8Q8NDX2 589 aa8.88□□□□□ -0.99
LIMD1-204ENST00000474665 FRAT1Q92837 279 aaPredicted RBP8.88□□□□□ -0.99
LIMD1-204ENST00000474665 FAM89AQ96GI7 184 aa8.88□□□□□ -0.99
LIMD1-204ENST00000474665 L3MBTL3Q96JM7 780 aaPredicted RBP8.88□□□□□ -0.99
LIMD1-204ENST00000474665 UTP14AQ9BVJ6 771 aaKnown RBP8.88□□□□□ -0.99
LIMD1-204ENST00000474665 MYH3P11055 1940 aa8.88□□□□□ -0.99
LIMD1-204ENST00000474665 KIF16BQ96L93 1317 aa8.87□□□□□ -0.99
LIMD1-204ENST00000474665 DLEC1Q9Y238 1755 aa8.87□□□□□ -0.99
LIMD1-204ENST00000474665 PCCAP05165 728 aaPredicted RBP8.87□□□□□ -0.99
LIMD1-204ENST00000474665 HCLS1P14317 486 aaPredicted RBP8.87□□□□□ -0.99
LIMD1-204ENST00000474665 RTL5Q5HYW3 569 aaPredicted RBP8.87□□□□□ -0.99
LIMD1-204ENST00000474665 C20orf194Q5TEA3 1177 aa8.87□□□□□ -0.99
LIMD1-204ENST00000474665 CST9Q5W186 159 aa8.87□□□□□ -0.99
LIMD1-204ENST00000474665 INTS3Q68E01 1043 aaKnown RBP8.87□□□□□ -0.99
LIMD1-204ENST00000474665 CIAPIN1Q6FI81 312 aa8.87□□□□□ -0.99
LIMD1-204ENST00000474665 SLC4A10Q6U841 1118 aa8.87□□□□□ -0.99
LIMD1-204ENST00000474665 TPTE2Q6XPS3 522 aa8.87□□□□□ -0.99
LIMD1-204ENST00000474665 ZBTB38Q8NAP3 1195 aaPredicted RBP8.87□□□□□ -0.99
LIMD1-204ENST00000474665 CLUAP1Q96AJ1 413 aa8.87□□□□□ -0.99
LIMD1-204ENST00000474665 KAZALD1Q96I82 304 aa8.87□□□□□ -0.99
LIMD1-204ENST00000474665 BRIP1Q9BX63 1249 aa8.87□□□□□ -0.99
LIMD1-204ENST00000474665 USP44Q9H0E7 712 aa8.87□□□□□ -0.99
LIMD1-204ENST00000474665 CWC25Q9NXE8 425 aaPredicted RBP8.87□□□□□ -0.99
LIMD1-204ENST00000474665 TRMT112Q9UI30 125 aaKnown RBP8.87□□□□□ -0.99
LIMD1-204ENST00000474665 HACL1Q9UJ83 578 aa8.87□□□□□ -0.99
LIMD1-204ENST00000474665 RIC1Q4ADV7 1423 aa8.87□□□□□ -0.99
LIMD1-204ENST00000474665 SLX4Q8IY92 1834 aa8.87□□□□□ -0.99
LIMD1-204ENST00000474665 UTYO14607 1347 aa8.86□□□□□ -0.99
LIMD1-204ENST00000474665 SH3TC1Q8TE82 1336 aa8.86□□□□□ -0.99
LIMD1-204ENST00000474665 ALDH1L1O75891 902 aa8.86□□□□□ -0.99
LIMD1-204ENST00000474665 NBPF7P0C2Y1 421 aaPredicted RBP8.86□□□□□ -0.99
LIMD1-204ENST00000474665 NEXNQ0ZGT2 675 aa8.86□□□□□ -0.99
LIMD1-204ENST00000474665 CRY2Q49AN0 593 aa8.86□□□□□ -0.99
LIMD1-204ENST00000474665 EPHA10Q5JZY3 1008 aa8.86□□□□□ -0.99
LIMD1-204ENST00000474665 ZKSCAN2Q63HK3 967 aa8.86□□□□□ -0.99
LIMD1-204ENST00000474665 UBE3BQ7Z3V4 1068 aa8.86□□□□□ -0.99
LIMD1-204ENST00000474665 PPP1R42Q7Z4L9 355 aa8.86□□□□□ -0.99
LIMD1-204ENST00000474665 SLC51AQ86UW1 340 aa8.86□□□□□ -0.99
LIMD1-204ENST00000474665 TMEM57Q8N5G2 664 aa8.86□□□□□ -0.99
LIMD1-204ENST00000474665 PANK1Q8TE04 598 aa8.86□□□□□ -0.99
LIMD1-204ENST00000474665 API5Q9BZZ5 524 aaKnown RBP8.86□□□□□ -0.99
LIMD1-204ENST00000474665 TLL2Q9Y6L7 1015 aa8.86□□□□□ -0.99
LIMD1-204ENST00000474665 RNF123Q5XPI4 1314 aa8.85□□□□□ -0.99
LIMD1-204ENST00000474665 H0YIN7 160 aa8.85□□□□□ -0.99
LIMD1-204ENST00000474665 GRM8O00222 908 aa8.85□□□□□ -0.99
LIMD1-204ENST00000474665 TRAF5O00463 557 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms