RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 RBM17Q96I25 401 aaKnown RBP19.86■□□□□ 0.77
COL1A1-204ENST00000474644 PRPF40BQ6NWY9 871 aaKnown RBP19.85■□□□□ 0.77
COL1A1-204ENST00000474644 CRAMP1Q96RY5 1269 aa19.85■□□□□ 0.77
COL1A1-204ENST00000474644 COL4A1P02462 1669 aa19.84■□□□□ 0.77
COL1A1-204ENST00000474644 GOLGB1Q14789 3259 aaKnown RBP19.84■□□□□ 0.77
COL1A1-204ENST00000474644 GPR162Q16538 588 aa19.84■□□□□ 0.77
COL1A1-204ENST00000474644 SUCLG2Q96I99 432 aa19.84■□□□□ 0.77
COL1A1-204ENST00000474644 ALDH1B1P30837 517 aa19.83■□□□□ 0.77
COL1A1-204ENST00000474644 FOXO4P98177 505 aa19.83■□□□□ 0.77
COL1A1-204ENST00000474644 CCDC152Q4G0S7 254 aa19.83■□□□□ 0.77
COL1A1-204ENST00000474644 EPHA10Q5JZY3 1008 aa19.83■□□□□ 0.77
COL1A1-204ENST00000474644 DDX46Q7L014 1031 aaKnown RBP19.83■□□□□ 0.77
COL1A1-204ENST00000474644 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.83■□□□□ 0.77
COL1A1-204ENST00000474644 TTLL11Q8NHH1 800 aa19.83■□□□□ 0.77
COL1A1-204ENST00000474644 PANK1Q8TE04 598 aa19.83■□□□□ 0.77
COL1A1-204ENST00000474644 KAZALD1Q96I82 304 aa19.83■□□□□ 0.77
COL1A1-204ENST00000474644 CCDC85AQ96PX6 553 aaPredicted RBP19.83■□□□□ 0.77
COL1A1-204ENST00000474644 MEIS3Q99687 375 aa19.83■□□□□ 0.77
COL1A1-204ENST00000474644 ARFGEF1Q9Y6D6 1849 aa19.83■□□□□ 0.76
COL1A1-204ENST00000474644 RTL9Q8NET4 1388 aa19.83■□□□□ 0.76
COL1A1-204ENST00000474644 CACNA1SQ13698 1873 aa19.82■□□□□ 0.76
COL1A1-204ENST00000474644 SLX4Q8IY92 1834 aa19.82■□□□□ 0.76
COL1A1-204ENST00000474644 MS4A1P11836 297 aa19.82■□□□□ 0.76
COL1A1-204ENST00000474644 MYH3P11055 1940 aa19.82■□□□□ 0.76
COL1A1-204ENST00000474644 CSF1RP07333 972 aa19.81■□□□□ 0.76
COL1A1-204ENST00000474644 UBTFL1P0CB47 393 aaPredicted RBP19.81■□□□□ 0.76
COL1A1-204ENST00000474644 RRP1P56182 461 aaKnown RBP19.81■□□□□ 0.76
COL1A1-204ENST00000474644 GRAPQ13588 217 aa19.81■□□□□ 0.76
COL1A1-204ENST00000474644 ITPRIPQ8IWB1 547 aa19.81■□□□□ 0.76
COL1A1-204ENST00000474644 GRAPLQ8TC17 118 aaPredicted RBP19.81■□□□□ 0.76
COL1A1-204ENST00000474644 GREM2Q9H772 168 aa19.81■□□□□ 0.76
COL1A1-204ENST00000474644 SEC31BQ9NQW1 1179 aa19.81■□□□□ 0.76
COL1A1-204ENST00000474644 PPEF1O14829 653 aaPredicted RBP19.8■□□□□ 0.76
COL1A1-204ENST00000474644 FAM161AQ3B820 660 aa19.8■□□□□ 0.76
COL1A1-204ENST00000474644 CELF1Q92879 486 aaKnown RBP19.8■□□□□ 0.76
COL1A1-204ENST00000474644 BICC1Q9H694 974 aaKnown RBP19.8■□□□□ 0.76
COL1A1-204ENST00000474644 ZNF219Q9P2Y4 722 aaPredicted RBP19.8■□□□□ 0.76
COL1A1-204ENST00000474644 C21orf2O43822 256 aa19.79■□□□□ 0.76
COL1A1-204ENST00000474644 C20orf194Q5TEA3 1177 aa19.79■□□□□ 0.76
COL1A1-204ENST00000474644 LMBR1LQ6UX01 489 aa19.79■□□□□ 0.76
COL1A1-204ENST00000474644 SLC51AQ86UW1 340 aa19.79■□□□□ 0.76
COL1A1-204ENST00000474644 ANKRD44Q8N8A2 993 aa19.79■□□□□ 0.76
COL1A1-204ENST00000474644 C7orf43Q8WVR3 580 aa19.79■□□□□ 0.76
COL1A1-204ENST00000474644 GRIN3BO60391 1043 aa19.78■□□□□ 0.76
COL1A1-204ENST00000474644 GNAI3P08754 354 aa19.78■□□□□ 0.76
COL1A1-204ENST00000474644 PDE3AQ14432 1141 aa19.78■□□□□ 0.76
COL1A1-204ENST00000474644 RABL6Q3YEC7 729 aaPredicted RBP19.78■□□□□ 0.76
COL1A1-204ENST00000474644 LRRC37AA6NMS7 1700 aa19.77■□□□□ 0.76
COL1A1-204ENST00000474644 ITGA6P23229 1130 aa19.77■□□□□ 0.76
COL1A1-204ENST00000474644 MVPQ14764 893 aaKnown RBP19.77■□□□□ 0.76
COL1A1-204ENST00000474644 OLFM4Q6UX06 510 aa19.77■□□□□ 0.76
COL1A1-204ENST00000474644 CHMP3Q9Y3E7 222 aa19.77■□□□□ 0.76
COL1A1-204ENST00000474644 LRRFIP2Q9Y608 721 aaKnown RBP19.77■□□□□ 0.76
COL1A1-204ENST00000474644 SNED1Q8TER0 1413 aa19.76■□□□□ 0.75
COL1A1-204ENST00000474644 TAF1P21675 1872 aa19.76■□□□□ 0.75
COL1A1-204ENST00000474644 BBOX1O75936 387 aa19.76■□□□□ 0.75
COL1A1-204ENST00000474644 SOGA3Q5TF21 947 aa19.76■□□□□ 0.75
COL1A1-204ENST00000474644 CDC5LQ99459 802 aaKnown RBP19.76■□□□□ 0.75
COL1A1-204ENST00000474644 COG6Q9Y2V7 657 aa19.76■□□□□ 0.75
COL1A1-204ENST00000474644 RPS8P62241 208 aaKnown RBP19.75■□□□□ 0.75
COL1A1-204ENST00000474644 CCDC93Q567U6 631 aa19.75■□□□□ 0.75
COL1A1-204ENST00000474644 TMC4Q7Z404 712 aa19.75■□□□□ 0.75
COL1A1-204ENST00000474644 HDAC5Q9UQL6 1122 aa19.75■□□□□ 0.75
COL1A1-204ENST00000474644 ATP6V0A2Q9Y487 856 aa19.75■□□□□ 0.75
COL1A1-204ENST00000474644 ZBTB7BO15156 539 aaPredicted RBP19.74■□□□□ 0.75
COL1A1-204ENST00000474644 IFIT5Q13325 482 aaKnown RBP19.74■□□□□ 0.75
COL1A1-204ENST00000474644 ANKRD18AQ8IVF6 992 aa19.74■□□□□ 0.75
COL1A1-204ENST00000474644 ANKRD18BA2A2Z9 1011 aa19.73■□□□□ 0.75
COL1A1-204ENST00000474644 GNAI2P04899 355 aa19.73■□□□□ 0.75
COL1A1-204ENST00000474644 ARHGAP27Q6ZUM4 889 aa19.73■□□□□ 0.75
COL1A1-204ENST00000474644 SP8Q8IXZ3 490 aa19.73■□□□□ 0.75
COL1A1-204ENST00000474644 ZNF784Q8NCA9 323 aaPredicted RBP19.73■□□□□ 0.75
COL1A1-204ENST00000474644 DDX19BQ9UMR2 479 aa19.73■□□□□ 0.75
COL1A1-204ENST00000474644 NFKBIEO00221 500 aa19.72■□□□□ 0.75
COL1A1-204ENST00000474644 RASSF7Q02833 373 aa19.72■□□□□ 0.75
COL1A1-204ENST00000474644 CCDC57Q2TAC2 916 aa19.72■□□□□ 0.75
COL1A1-204ENST00000474644 CC2D2BQ6DHV5 1058 aa19.72■□□□□ 0.75
COL1A1-204ENST00000474644 FER1L6Q2WGJ9 1857 aa19.71■□□□□ 0.75
COL1A1-204ENST00000474644 IGHMBP2P38935 993 aaKnown RBP19.71■□□□□ 0.75
COL1A1-204ENST00000474644 C1orf115Q9H7X2 142 aa19.71■□□□□ 0.75
COL1A1-204ENST00000474644 SPEF2Q9C093 1822 aa19.71■□□□□ 0.75
COL1A1-204ENST00000474644 DUOX1Q9NRD9 1551 aa19.7■□□□□ 0.74
COL1A1-204ENST00000474644 RTKN2Q8IZC4 609 aa19.7■□□□□ 0.74
COL1A1-204ENST00000474644 ZNF594Q96JF6 807 aaPredicted RBP19.7■□□□□ 0.74
COL1A1-204ENST00000474644 TMX4Q9H1E5 349 aaPredicted RBP19.7■□□□□ 0.74
COL1A1-204ENST00000474644 TAOK3Q9H2K8 898 aa19.7■□□□□ 0.74
COL1A1-204ENST00000474644 BSDC1Q9NW68 430 aaPredicted RBP19.7■□□□□ 0.74
COL1A1-204ENST00000474644 LTBP3Q9NS15 1303 aa19.7■□□□□ 0.74
COL1A1-204ENST00000474644 LTBP1Q14766 1721 aa19.69■□□□□ 0.74
COL1A1-204ENST00000474644 MTX1Q13505 466 aa19.69■□□□□ 0.74
COL1A1-204ENST00000474644 GRIPAP1Q4V328 841 aa19.69■□□□□ 0.74
COL1A1-204ENST00000474644 TAF7LQ5H9L4 462 aa19.69■□□□□ 0.74
COL1A1-204ENST00000474644 SUPT16HQ9Y5B9 1047 aaKnown RBP19.69■□□□□ 0.74
COL1A1-204ENST00000474644 RFX5P48382 616 aaPredicted RBP19.68■□□□□ 0.74
COL1A1-204ENST00000474644 FKBP4Q02790 459 aaKnown RBP eCLIP19.68■□□□□ 0.74
COL1A1-204ENST00000474644 PSMD1Q99460 953 aa19.68■□□□□ 0.74
COL1A1-204ENST00000474644 MPHOSPH8Q99549 860 aa19.68■□□□□ 0.74
COL1A1-204ENST00000474644 PRELPP51888 382 aa19.67■□□□□ 0.74
COL1A1-204ENST00000474644 GPSM2P81274 684 aa19.67■□□□□ 0.74
COL1A1-204ENST00000474644 DPP8Q6V1X1 898 aaPredicted RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms