RNA–Protein interactions for RNA: ENST00000474394.5

RNF220-210, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 810 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-210ENST00000474394 FAM89AQ96GI7 184 aa13.74□□□□□ -0.21
RNF220-210ENST00000474394 CRAMP1Q96RY5 1269 aa13.74□□□□□ -0.21
RNF220-210ENST00000474394 CWC25Q9NXE8 425 aaPredicted RBP13.74□□□□□ -0.21
RNF220-210ENST00000474394 CACNA1SQ13698 1873 aa13.74□□□□□ -0.21
RNF220-210ENST00000474394 IRS4O14654 1257 aaPredicted RBP13.73□□□□□ -0.21
RNF220-210ENST00000474394 CCDC93Q567U6 631 aa13.73□□□□□ -0.21
RNF220-210ENST00000474394 CHADLQ6NUI6 762 aa13.73□□□□□ -0.21
RNF220-210ENST00000474394 DPY19L2Q6NUT2 758 aa13.73□□□□□ -0.21
RNF220-210ENST00000474394 TRMT2AQ8IZ69 625 aaKnown RBP13.73□□□□□ -0.21
RNF220-210ENST00000474394 DNAAF4Q8WXU2 420 aa13.73□□□□□ -0.21
RNF220-210ENST00000474394 WBP1LQ9NX94 342 aa13.73□□□□□ -0.21
RNF220-210ENST00000474394 NFKBIEO00221 500 aa13.72□□□□□ -0.21
RNF220-210ENST00000474394 PCCAP05165 728 aaPredicted RBP13.72□□□□□ -0.21
RNF220-210ENST00000474394 HNRNPUQ00839 825 aaKnown RBP eCLIP13.72□□□□□ -0.21
RNF220-210ENST00000474394 RTL5Q5HYW3 569 aaPredicted RBP13.72□□□□□ -0.21
RNF220-210ENST00000474394 C7orf43Q8WVR3 580 aa13.72□□□□□ -0.21
RNF220-210ENST00000474394 TIAM2Q8IVF5 1701 aa13.72□□□□□ -0.21
RNF220-210ENST00000474394 LTBP3Q9NS15 1303 aa13.71□□□□□ -0.21
RNF220-210ENST00000474394 CCDC85CA6NKD9 419 aa13.71□□□□□ -0.21
RNF220-210ENST00000474394 NEURL1BA8MQ27 555 aa13.71□□□□□ -0.21
RNF220-210ENST00000474394 IGKV5-2P06315 115 aa13.71□□□□□ -0.21
RNF220-210ENST00000474394 CT47B1P0C2W7 299 aaPredicted RBP13.71□□□□□ -0.21
RNF220-210ENST00000474394 VEGFBP49765 207 aa13.71□□□□□ -0.21
RNF220-210ENST00000474394 CC2D2BQ6DHV5 1058 aa13.71□□□□□ -0.21
RNF220-210ENST00000474394 DDX46Q7L014 1031 aaKnown RBP13.71□□□□□ -0.21
RNF220-210ENST00000474394 RTKN2Q8IZC4 609 aa13.71□□□□□ -0.21
RNF220-210ENST00000474394 TAOK3Q9H2K8 898 aa13.71□□□□□ -0.21
RNF220-210ENST00000474394 FER1L6Q2WGJ9 1857 aa13.7□□□□□ -0.22
RNF220-210ENST00000474394 PPEF1O14829 653 aaPredicted RBP13.7□□□□□ -0.22
RNF220-210ENST00000474394 SF3B3Q15393 1217 aaKnown RBP13.7□□□□□ -0.22
RNF220-210ENST00000474394 CWF19L2Q2TBE0 894 aaKnown RBP13.7□□□□□ -0.22
RNF220-210ENST00000474394 LINS1Q8NG48 757 aa13.7□□□□□ -0.22
RNF220-210ENST00000474394 TMX4Q9H1E5 349 aaPredicted RBP13.7□□□□□ -0.22
RNF220-210ENST00000474394 ABCC4O15439 1325 aa13.69□□□□□ -0.22
RNF220-210ENST00000474394 CDHR2Q9BYE9 1310 aa13.69□□□□□ -0.22
RNF220-210ENST00000474394 LAMB2P55268 1798 aa13.69□□□□□ -0.22
RNF220-210ENST00000474394 F6X3S4 739 aa13.69□□□□□ -0.22
RNF220-210ENST00000474394 PDE8AO60658 829 aa13.69□□□□□ -0.22
RNF220-210ENST00000474394 BBOX1O75936 387 aa13.69□□□□□ -0.22
RNF220-210ENST00000474394 GRIPAP1Q4V328 841 aa13.69□□□□□ -0.22
RNF220-210ENST00000474394 DDX60Q8IY21 1712 aaKnown RBP13.69□□□□□ -0.22
RNF220-210ENST00000474394 CENPBP07199 599 aaPredicted RBP13.68□□□□□ -0.22
RNF220-210ENST00000474394 HSPA8P11142 646 aaKnown RBP13.68□□□□□ -0.22
RNF220-210ENST00000474394 FKBP4Q02790 459 aaKnown RBP eCLIP13.68□□□□□ -0.22
RNF220-210ENST00000474394 GRAPQ13588 217 aa13.68□□□□□ -0.22
RNF220-210ENST00000474394 GCKRQ14397 625 aa13.68□□□□□ -0.22
RNF220-210ENST00000474394 ALDH1L2Q3SY69 923 aa13.68□□□□□ -0.22
RNF220-210ENST00000474394 OLFM4Q6UX06 510 aa13.68□□□□□ -0.22
RNF220-210ENST00000474394 MRPL50Q8N5N7 158 aaKnown RBP13.68□□□□□ -0.22
RNF220-210ENST00000474394 GRAPLQ8TC17 118 aaPredicted RBP13.68□□□□□ -0.22
RNF220-210ENST00000474394 SSH1Q8WYL5 1049 aa13.68□□□□□ -0.22
RNF220-210ENST00000474394 JARID2Q92833 1246 aaPredicted RBP13.68□□□□□ -0.22
RNF220-210ENST00000474394 H7C1W4 665 aa13.67□□□□□ -0.22
RNF220-210ENST00000474394 CCDC152Q4G0S7 254 aa13.67□□□□□ -0.22
RNF220-210ENST00000474394 TMC4Q7Z404 712 aa13.67□□□□□ -0.22
RNF220-210ENST00000474394 ATP6V0A2Q9Y487 856 aa13.67□□□□□ -0.22
RNF220-210ENST00000474394 PTPRCP08575 1304 aa13.66□□□□□ -0.22
RNF220-210ENST00000474394 PASKQ96RG2 1323 aa13.66□□□□□ -0.22
RNF220-210ENST00000474394 DICER1Q9UPY3 1922 aaKnown RBP13.66□□□□□ -0.22
RNF220-210ENST00000474394 TMEM88BA6NKF7 163 aa13.66□□□□□ -0.22
RNF220-210ENST00000474394 POTEIP0CG38 1075 aa13.66□□□□□ -0.22
RNF220-210ENST00000474394 POTEJP0CG39 1038 aa13.66□□□□□ -0.22
RNF220-210ENST00000474394 BEND3Q5T5X7 828 aa13.66□□□□□ -0.22
RNF220-210ENST00000474394 SLC4A10Q6U841 1118 aa13.66□□□□□ -0.22
RNF220-210ENST00000474394 UBE3BQ7Z3V4 1068 aa13.66□□□□□ -0.22
RNF220-210ENST00000474394 SP8Q8IXZ3 490 aa13.66□□□□□ -0.22
RNF220-210ENST00000474394 PSMD1Q99460 953 aa13.66□□□□□ -0.22
RNF220-210ENST00000474394 BCL2L13Q9BXK5 485 aa13.66□□□□□ -0.22
RNF220-210ENST00000474394 SMC4Q9NTJ3 1288 aa13.66□□□□□ -0.22
RNF220-210ENST00000474394 ALDH1L1O75891 902 aa13.65□□□□□ -0.22
RNF220-210ENST00000474394 CTSWP56202 376 aa13.65□□□□□ -0.22
RNF220-210ENST00000474394 MAP2K1Q02750 393 aaPredicted RBP13.65□□□□□ -0.22
RNF220-210ENST00000474394 ZNF277Q9NRM2 450 aaPredicted RBP13.65□□□□□ -0.22
RNF220-210ENST00000474394 RPS8P62241 208 aaKnown RBP13.64□□□□□ -0.23
RNF220-210ENST00000474394 CELF1Q92879 486 aaKnown RBP13.64□□□□□ -0.23
RNF220-210ENST00000474394 PLA2G12BQ9BX93 195 aa13.64□□□□□ -0.23
RNF220-210ENST00000474394 SRCIN1Q9C0H9 1055 aa13.64□□□□□ -0.23
RNF220-210ENST00000474394 SNED1Q8TER0 1413 aa13.64□□□□□ -0.23
RNF220-210ENST00000474394 ZBED9Q6R2W3 1325 aa13.64□□□□□ -0.23
RNF220-210ENST00000474394 IARSP41252 1262 aaKnown RBP13.63□□□□□ -0.23
RNF220-210ENST00000474394 CASP7P55210 303 aa13.63□□□□□ -0.23
RNF220-210ENST00000474394 MPNDQ8N594 471 aa13.63□□□□□ -0.23
RNF220-210ENST00000474394 SUPT20HQ8NEM7 779 aa13.63□□□□□ -0.23
RNF220-210ENST00000474394 TTLL11Q8NHH1 800 aa13.63□□□□□ -0.23
RNF220-210ENST00000474394 CCDC85AQ96PX6 553 aaPredicted RBP13.63□□□□□ -0.23
RNF220-210ENST00000474394 SEC31BQ9NQW1 1179 aa13.63□□□□□ -0.23
RNF220-210ENST00000474394 TAF1P21675 1872 aa13.63□□□□□ -0.23
RNF220-210ENST00000474394 RARSP54136 660 aaKnown RBP13.62□□□□□ -0.23
RNF220-210ENST00000474394 BRPF1P55201 1214 aaPredicted RBP13.62□□□□□ -0.23
RNF220-210ENST00000474394 DEFB115Q30KQ5 88 aa13.62□□□□□ -0.23
RNF220-210ENST00000474394 DPP8Q6V1X1 898 aaPredicted RBP13.62□□□□□ -0.23
RNF220-210ENST00000474394 SLC51AQ86UW1 340 aa13.62□□□□□ -0.23
RNF220-210ENST00000474394 LDHDQ86WU2 507 aa13.62□□□□□ -0.23
RNF220-210ENST00000474394 CDC5LQ99459 802 aaKnown RBP13.62□□□□□ -0.23
RNF220-210ENST00000474394 C9orf78Q9NZ63 289 aaPredicted RBP13.62□□□□□ -0.23
RNF220-210ENST00000474394 MYH3P11055 1940 aa13.61□□□□□ -0.23
RNF220-210ENST00000474394 GRM8O00222 908 aa13.61□□□□□ -0.23
RNF220-210ENST00000474394 DDNO94850 711 aaPredicted RBP13.61□□□□□ -0.23
RNF220-210ENST00000474394 ANKRD18AQ8IVF6 992 aa13.61□□□□□ -0.23
RNF220-210ENST00000474394 JDP2Q8WYK2 163 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms