RNA–Protein interactions for RNA: ENST00000474305.2

CASP9-209, Transcript of caspase 9, humanhuman

TSL 1 (best)

Gene CASP9, Length 1,111 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9-209ENST00000474305 PRPF40BQ6NWY9 871 aaKnown RBP23.35■■□□□ 1.33
CASP9-209ENST00000474305 DDX46Q7L014 1031 aaKnown RBP23.35■■□□□ 1.33
CASP9-209ENST00000474305 TTLL11Q8NHH1 800 aa23.35■■□□□ 1.33
CASP9-209ENST00000474305 C7orf43Q8WVR3 580 aa23.35■■□□□ 1.33
CASP9-209ENST00000474305 UTRNP46939 3433 aa23.34■■□□□ 1.33
CASP9-209ENST00000474305 CTSWP56202 376 aa23.34■■□□□ 1.33
CASP9-209ENST00000474305 CCDC152Q4G0S7 254 aa23.34■■□□□ 1.33
CASP9-209ENST00000474305 CACNA1SQ13698 1873 aa23.34■■□□□ 1.33
CASP9-209ENST00000474305 BBOX1O75936 387 aa23.33■■□□□ 1.33
CASP9-209ENST00000474305 FOXO4P98177 505 aa23.33■■□□□ 1.33
CASP9-209ENST00000474305 DZIP1LQ8IYY4 767 aaKnown RBP23.33■■□□□ 1.33
CASP9-209ENST00000474305 CLUAP1Q96AJ1 413 aa23.33■■□□□ 1.33
CASP9-209ENST00000474305 TAF1P21675 1872 aa23.32■■□□□ 1.32
CASP9-209ENST00000474305 RTL9Q8NET4 1388 aa23.31■■□□□ 1.32
CASP9-209ENST00000474305 MS4A1P11836 297 aa23.31■■□□□ 1.32
CASP9-209ENST00000474305 GRAPQ13588 217 aa23.31■■□□□ 1.32
CASP9-209ENST00000474305 GRAPLQ8TC17 118 aaPredicted RBP23.31■■□□□ 1.32
CASP9-209ENST00000474305 KAZALD1Q96I82 304 aa23.31■■□□□ 1.32
CASP9-209ENST00000474305 C21orf2O43822 256 aa23.3■■□□□ 1.32
CASP9-209ENST00000474305 EPHA10Q5JZY3 1008 aa23.3■■□□□ 1.32
CASP9-209ENST00000474305 TMEM57Q8N5G2 664 aa23.3■■□□□ 1.32
CASP9-209ENST00000474305 SOGA3Q5TF21 947 aa23.29■■□□□ 1.32
CASP9-209ENST00000474305 SUCLG2Q96I99 432 aa23.29■■□□□ 1.32
CASP9-209ENST00000474305 SEC31BQ9NQW1 1179 aa23.29■■□□□ 1.32
CASP9-209ENST00000474305 RLBP1P12271 317 aa23.28■■□□□ 1.32
CASP9-209ENST00000474305 RPS8P62241 208 aaKnown RBP23.28■■□□□ 1.32
CASP9-209ENST00000474305 CC2D2BQ6DHV5 1058 aa23.28■■□□□ 1.32
CASP9-209ENST00000474305 ARHGAP27Q6ZUM4 889 aa23.28■■□□□ 1.32
CASP9-209ENST00000474305 TMC4Q7Z404 712 aa23.28■■□□□ 1.32
CASP9-209ENST00000474305 FTSJ3Q8IY81 847 aaKnown RBP23.28■■□□□ 1.32
CASP9-209ENST00000474305 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.28■■□□□ 1.32
CASP9-209ENST00000474305 CELF1Q92879 486 aaKnown RBP23.28■■□□□ 1.32
CASP9-209ENST00000474305 GREM2Q9H772 168 aa23.28■■□□□ 1.32
CASP9-209ENST00000474305 PPEF1O14829 653 aaPredicted RBP23.27■■□□□ 1.32
CASP9-209ENST00000474305 SP8Q8IXZ3 490 aa23.27■■□□□ 1.32
CASP9-209ENST00000474305 CCDC85AQ96PX6 553 aaPredicted RBP23.27■■□□□ 1.32
CASP9-209ENST00000474305 HDAC5Q9UQL6 1122 aa23.27■■□□□ 1.32
CASP9-209ENST00000474305 ATP6V0A2Q9Y487 856 aa23.27■■□□□ 1.32
CASP9-209ENST00000474305 FER1L6Q2WGJ9 1857 aa23.26■■□□□ 1.31
CASP9-209ENST00000474305 PLIN1O60240 522 aa23.26■■□□□ 1.31
CASP9-209ENST00000474305 RABL6Q3YEC7 729 aaPredicted RBP23.26■■□□□ 1.31
CASP9-209ENST00000474305 GRIPAP1Q4V328 841 aa23.26■■□□□ 1.31
CASP9-209ENST00000474305 LMBR1LQ6UX01 489 aa23.26■■□□□ 1.31
CASP9-209ENST00000474305 ZNF219Q9P2Y4 722 aaPredicted RBP23.26■■□□□ 1.31
CASP9-209ENST00000474305 GNAI3P08754 354 aa23.25■■□□□ 1.31
CASP9-209ENST00000474305 UBTFL1P0CB47 393 aaPredicted RBP23.25■■□□□ 1.31
CASP9-209ENST00000474305 PDE3AQ14432 1141 aa23.25■■□□□ 1.31
CASP9-209ENST00000474305 CDC5LQ99459 802 aaKnown RBP23.25■■□□□ 1.31
CASP9-209ENST00000474305 MEIS3Q99687 375 aa23.25■■□□□ 1.31
CASP9-209ENST00000474305 CHD4Q14839 1912 aa23.24■■□□□ 1.31
CASP9-209ENST00000474305 CCDC93Q567U6 631 aa23.24■■□□□ 1.31
CASP9-209ENST00000474305 RTKN2Q8IZC4 609 aa23.24■■□□□ 1.31
CASP9-209ENST00000474305 ANKRD44Q8N8A2 993 aa23.24■■□□□ 1.31
CASP9-209ENST00000474305 PANK1Q8TE04 598 aa23.24■■□□□ 1.31
CASP9-209ENST00000474305 BICC1Q9H694 974 aaKnown RBP23.24■■□□□ 1.31
CASP9-209ENST00000474305 COL4A1P02462 1669 aa23.23■■□□□ 1.31
CASP9-209ENST00000474305 ITGA6P23229 1130 aa23.23■■□□□ 1.31
CASP9-209ENST00000474305 FAM161AQ3B820 660 aa23.23■■□□□ 1.31
CASP9-209ENST00000474305 OLFM4Q6UX06 510 aa23.23■■□□□ 1.31
CASP9-209ENST00000474305 ANKRD18AQ8IVF6 992 aa23.23■■□□□ 1.31
CASP9-209ENST00000474305 SNED1Q8TER0 1413 aa23.23■■□□□ 1.31
CASP9-209ENST00000474305 SBF1O95248 1867 aa23.22■■□□□ 1.31
CASP9-209ENST00000474305 ANKRD18BA2A2Z9 1011 aa23.22■■□□□ 1.31
CASP9-209ENST00000474305 NFKBIEO00221 500 aa23.22■■□□□ 1.31
CASP9-209ENST00000474305 ZBTB7BO15156 539 aaPredicted RBP23.22■■□□□ 1.31
CASP9-209ENST00000474305 TMX4Q9H1E5 349 aaPredicted RBP23.22■■□□□ 1.31
CASP9-209ENST00000474305 LTBP3Q9NS15 1303 aa23.22■■□□□ 1.31
CASP9-209ENST00000474305 IFIT5Q13325 482 aaKnown RBP23.21■■□□□ 1.31
CASP9-209ENST00000474305 ITPRIPQ8IWB1 547 aa23.21■■□□□ 1.31
CASP9-209ENST00000474305 BSDC1Q9NW68 430 aaPredicted RBP23.21■■□□□ 1.31
CASP9-209ENST00000474305 CCDC57Q2TAC2 916 aa23.2■■□□□ 1.3
CASP9-209ENST00000474305 LRRFIP2Q9Y608 721 aaKnown RBP23.2■■□□□ 1.3
CASP9-209ENST00000474305 PSMD1Q99460 953 aa23.19■■□□□ 1.3
CASP9-209ENST00000474305 CHMP3Q9Y3E7 222 aa23.19■■□□□ 1.3
CASP9-209ENST00000474305 LRRC37AA6NMS7 1700 aa23.19■■□□□ 1.3
CASP9-209ENST00000474305 CCDC88AQ3V6T2 1871 aa23.18■■□□□ 1.3
CASP9-209ENST00000474305 GNAI2P04899 355 aa23.18■■□□□ 1.3
CASP9-209ENST00000474305 IGHMBP2P38935 993 aaKnown RBP23.18■■□□□ 1.3
CASP9-209ENST00000474305 FKBP4Q02790 459 aaKnown RBP eCLIP23.18■■□□□ 1.3
CASP9-209ENST00000474305 MVPQ14764 893 aaKnown RBP23.18■■□□□ 1.3
CASP9-209ENST00000474305 SLC51AQ86UW1 340 aa23.18■■□□□ 1.3
CASP9-209ENST00000474305 TAOK3Q9H2K8 898 aa23.18■■□□□ 1.3
CASP9-209ENST00000474305 RRP1P56182 461 aaKnown RBP23.17■■□□□ 1.3
CASP9-209ENST00000474305 C20orf194Q5TEA3 1177 aa23.17■■□□□ 1.3
CASP9-209ENST00000474305 MPNDQ8N594 471 aa23.17■■□□□ 1.3
CASP9-209ENST00000474305 RTFDC1Q9BY42 306 aaPredicted RBP23.17■■□□□ 1.3
CASP9-209ENST00000474305 PRELPP51888 382 aa23.16■■□□□ 1.3
CASP9-209ENST00000474305 RASSF7Q02833 373 aa23.16■■□□□ 1.3
CASP9-209ENST00000474305 MPHOSPH8Q99549 860 aa23.16■■□□□ 1.3
CASP9-209ENST00000474305 DDX19BQ9UMR2 479 aa23.16■■□□□ 1.3
CASP9-209ENST00000474305 COG6Q9Y2V7 657 aa23.16■■□□□ 1.3
CASP9-209ENST00000474305 LMNB1P20700 586 aa23.15■■□□□ 1.3
CASP9-209ENST00000474305 MTX1Q13505 466 aa23.15■■□□□ 1.3
CASP9-209ENST00000474305 PODXL2Q9NZ53 605 aa23.15■■□□□ 1.3
CASP9-209ENST00000474305 MINPP1Q9UNW1 487 aa23.15■■□□□ 1.3
CASP9-209ENST00000474305 RFX5P48382 616 aaPredicted RBP23.14■■□□□ 1.29
CASP9-209ENST00000474305 GPSM2P81274 684 aa23.14■■□□□ 1.29
CASP9-209ENST00000474305 DPP8Q6V1X1 898 aaPredicted RBP23.14■■□□□ 1.29
CASP9-209ENST00000474305 ZNF594Q96JF6 807 aaPredicted RBP23.14■■□□□ 1.29
CASP9-209ENST00000474305 VPS33BQ9H267 617 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms