RNA–Protein interactions for RNA: ENST00000474153.1

UBE3C-206, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-206ENST00000474153 PARP10Q53GL7 1025 aa7.73□□□□□ -1.17
UBE3C-206ENST00000474153 HSP90AB3PQ58FF7 597 aa7.73□□□□□ -1.17
UBE3C-206ENST00000474153 SLC10A5Q5PT55 438 aa7.73□□□□□ -1.17
UBE3C-206ENST00000474153 MAP1SQ66K74 1059 aaPredicted RBP7.73□□□□□ -1.17
UBE3C-206ENST00000474153 CC2D2BQ6DHV5 1058 aa7.73□□□□□ -1.17
UBE3C-206ENST00000474153 FAM9BQ8IZU0 186 aa7.73□□□□□ -1.17
UBE3C-206ENST00000474153 PLBD2Q8NHP8 589 aa7.73□□□□□ -1.17
UBE3C-206ENST00000474153 XAGE3Q8WTP9 111 aa7.73□□□□□ -1.17
UBE3C-206ENST00000474153 TSR2Q969E8 191 aaKnown RBP7.73□□□□□ -1.17
UBE3C-206ENST00000474153 PSMD1Q99460 953 aa7.73□□□□□ -1.17
UBE3C-206ENST00000474153 NYXQ9GZU5 481 aa7.73□□□□□ -1.17
UBE3C-206ENST00000474153 ZNF277Q9NRM2 450 aaPredicted RBP7.73□□□□□ -1.17
UBE3C-206ENST00000474153 LAS1LQ9Y4W2 734 aaKnown RBP7.73□□□□□ -1.17
UBE3C-206ENST00000474153 ZNF541Q9H0D2 1346 aa7.73□□□□□ -1.17
UBE3C-206ENST00000474153 TRPM7Q96QT4 1865 aa7.72□□□□□ -1.17
UBE3C-206ENST00000474153 CCDC85CA6NKD9 419 aa7.72□□□□□ -1.17
UBE3C-206ENST00000474153 CA12O43570 354 aa7.72□□□□□ -1.17
UBE3C-206ENST00000474153 LMOD1P29536 600 aaPredicted RBP7.72□□□□□ -1.17
UBE3C-206ENST00000474153 HOXA10P31260 410 aaPredicted RBP7.72□□□□□ -1.17
UBE3C-206ENST00000474153 MAP2K2P36507 400 aa7.72□□□□□ -1.17
UBE3C-206ENST00000474153 EIF6P56537 245 aaKnown RBP7.72□□□□□ -1.17
UBE3C-206ENST00000474153 TWISTNBQ3B726 338 aaPredicted RBP7.72□□□□□ -1.17
UBE3C-206ENST00000474153 CCDC30Q5VVM6 783 aa7.72□□□□□ -1.17
UBE3C-206ENST00000474153 SUSD4Q5VX71 490 aa7.72□□□□□ -1.17
UBE3C-206ENST00000474153 ANKRD13DQ6ZTN6 518 aa7.72□□□□□ -1.17
UBE3C-206ENST00000474153 NLRP10Q86W26 655 aa7.72□□□□□ -1.17
UBE3C-206ENST00000474153 SYNE4Q8N205 404 aa7.72□□□□□ -1.17
UBE3C-206ENST00000474153 GPR101Q96P66 508 aaPredicted RBP7.72□□□□□ -1.17
UBE3C-206ENST00000474153 ZBTB3Q9H5J0 574 aa7.72□□□□□ -1.17
UBE3C-206ENST00000474153 PHAXQ9H814 394 aaKnown RBP7.72□□□□□ -1.17
UBE3C-206ENST00000474153 POLR2AP24928 1970 aaKnown RBP7.71□□□□□ -1.17
UBE3C-206ENST00000474153 THSD7BQ9C0I4 1608 aa7.71□□□□□ -1.17
UBE3C-206ENST00000474153 COL4A5P29400 1685 aa7.71□□□□□ -1.18
UBE3C-206ENST00000474153 GTF2E1P29083 439 aaPredicted RBP7.71□□□□□ -1.18
UBE3C-206ENST00000474153 DIEXFQ68CQ4 756 aaKnown RBP7.71□□□□□ -1.18
UBE3C-206ENST00000474153 USP50Q70EL3 339 aaPredicted RBP7.71□□□□□ -1.18
UBE3C-206ENST00000474153 PPP1R42Q7Z4L9 355 aa7.71□□□□□ -1.18
UBE3C-206ENST00000474153 NECTIN2Q92692 538 aa7.71□□□□□ -1.18
UBE3C-206ENST00000474153 CAPNS2Q96L46 248 aa7.71□□□□□ -1.18
UBE3C-206ENST00000474153 EXOSC9Q06265 439 aaKnown RBP7.7□□□□□ -1.18
UBE3C-206ENST00000474153 SLFN5Q08AF3 891 aa7.7□□□□□ -1.18
UBE3C-206ENST00000474153 PAXIP1Q6ZW49 1069 aaPredicted RBP7.7□□□□□ -1.18
UBE3C-206ENST00000474153 HHIPL1Q96JK4 782 aa7.7□□□□□ -1.18
UBE3C-206ENST00000474153 MYH16Q9H6N6 1097 aa7.7□□□□□ -1.18
UBE3C-206ENST00000474153 TLL2Q9Y6L7 1015 aa7.7□□□□□ -1.18
UBE3C-206ENST00000474153 LAMB1P07942 1786 aa7.69□□□□□ -1.18
UBE3C-206ENST00000474153 E9PSI1 815 aa7.69□□□□□ -1.18
UBE3C-206ENST00000474153 ELL2O00472 640 aaPredicted RBP7.69□□□□□ -1.18
UBE3C-206ENST00000474153 GPTP24298 496 aa7.69□□□□□ -1.18
UBE3C-206ENST00000474153 SCNN1DP51172 638 aa7.69□□□□□ -1.18
UBE3C-206ENST00000474153 GOLGA2Q08379 1002 aa7.69□□□□□ -1.18
UBE3C-206ENST00000474153 AIMP1Q12904 312 aaKnown RBP7.69□□□□□ -1.18
UBE3C-206ENST00000474153 CYP4F22Q6NT55 531 aa7.69□□□□□ -1.18
UBE3C-206ENST00000474153 OLFM4Q6UX06 510 aa7.69□□□□□ -1.18
UBE3C-206ENST00000474153 NUTM1Q86Y26 1132 aa7.69□□□□□ -1.18
UBE3C-206ENST00000474153 ZNF428Q96B54 188 aa7.69□□□□□ -1.18
UBE3C-206ENST00000474153 CRAMP1Q96RY5 1269 aa7.69□□□□□ -1.18
UBE3C-206ENST00000474153 METTL22Q9BUU2 404 aaPredicted RBP7.69□□□□□ -1.18
UBE3C-206ENST00000474153 VPS33BQ9H267 617 aa7.69□□□□□ -1.18
UBE3C-206ENST00000474153 GJA3Q9Y6H8 435 aa7.69□□□□□ -1.18
UBE3C-206ENST00000474153 CDHR2Q9BYE9 1310 aa7.69□□□□□ -1.18
UBE3C-206ENST00000474153 IGKV5-2P06315 115 aa7.68□□□□□ -1.18
UBE3C-206ENST00000474153 EPS15P42566 896 aa7.68□□□□□ -1.18
UBE3C-206ENST00000474153 BRPF1P55201 1214 aaPredicted RBP7.68□□□□□ -1.18
UBE3C-206ENST00000474153 FLIIQ13045 1269 aa7.68□□□□□ -1.18
UBE3C-206ENST00000474153 SF3B3Q15393 1217 aaKnown RBP7.68□□□□□ -1.18
UBE3C-206ENST00000474153 CST9Q5W186 159 aa7.68□□□□□ -1.18
UBE3C-206ENST00000474153 KSR2Q6VAB6 950 aa7.68□□□□□ -1.18
UBE3C-206ENST00000474153 C3orf67Q6ZVT6 689 aa7.68□□□□□ -1.18
UBE3C-206ENST00000474153 G2E3Q7L622 706 aa7.68□□□□□ -1.18
UBE3C-206ENST00000474153 SAPCD2Q86UD0 394 aa7.68□□□□□ -1.18
UBE3C-206ENST00000474153 MIER1Q8N108 512 aa7.68□□□□□ -1.18
UBE3C-206ENST00000474153 CCDC191Q8NCU4 936 aa7.68□□□□□ -1.18
UBE3C-206ENST00000474153 UTP14AQ9BVJ6 771 aaKnown RBP7.68□□□□□ -1.18
UBE3C-206ENST00000474153 SH3TC1Q8TE82 1336 aa7.68□□□□□ -1.18
UBE3C-206ENST00000474153 RTL9Q8NET4 1388 aa7.68□□□□□ -1.18
UBE3C-206ENST00000474153 FAM177BA6PVY3 158 aa7.67□□□□□ -1.18
UBE3C-206ENST00000474153 DDX58O95786 925 aaKnown RBP7.67□□□□□ -1.18
UBE3C-206ENST00000474153 PCCAP05165 728 aaPredicted RBP7.67□□□□□ -1.18
UBE3C-206ENST00000474153 CT47B1P0C2W7 299 aaPredicted RBP7.67□□□□□ -1.18
UBE3C-206ENST00000474153 CASP7P55210 303 aa7.67□□□□□ -1.18
UBE3C-206ENST00000474153 GRM1Q13255 1194 aa7.67□□□□□ -1.18
UBE3C-206ENST00000474153 LARGE2Q8N3Y3 721 aa7.67□□□□□ -1.18
UBE3C-206ENST00000474153 ZBTB38Q8NAP3 1195 aaPredicted RBP7.67□□□□□ -1.18
UBE3C-206ENST00000474153 RPGRQ92834 1020 aaKnown RBP7.67□□□□□ -1.18
UBE3C-206ENST00000474153 STK31Q9BXU1 1019 aa7.67□□□□□ -1.18
UBE3C-206ENST00000474153 MCOLN1Q9GZU1 580 aa7.67□□□□□ -1.18
UBE3C-206ENST00000474153 TMX4Q9H1E5 349 aaPredicted RBP7.67□□□□□ -1.18
UBE3C-206ENST00000474153 ADARB2Q9NS39 739 aaKnown RBP7.67□□□□□ -1.18
UBE3C-206ENST00000474153 ABCC4O15439 1325 aa7.67□□□□□ -1.18
UBE3C-206ENST00000474153 CASP8AP2Q9UKL3 1982 aa7.66□□□□□ -1.18
UBE3C-206ENST00000474153 PI4KAP2A4QPH2 592 aa7.66□□□□□ -1.18
UBE3C-206ENST00000474153 NEURL1BA8MQ27 555 aa7.66□□□□□ -1.18
UBE3C-206ENST00000474153 SLC4A2P04920 1241 aa7.66□□□□□ -1.18
UBE3C-206ENST00000474153 RIC3Q7Z5B4 369 aa7.66□□□□□ -1.18
UBE3C-206ENST00000474153 NIM1KQ8IY84 436 aa7.66□□□□□ -1.18
UBE3C-206ENST00000474153 PI4KAP1Q8N8J0 262 aa7.66□□□□□ -1.18
UBE3C-206ENST00000474153 ZC3H15Q8WU90 426 aaKnown RBP7.66□□□□□ -1.18
UBE3C-206ENST00000474153 NLRP3Q96P20 1036 aa7.66□□□□□ -1.18
UBE3C-206ENST00000474153 PLA2G12BQ9BX93 195 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms